Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR0B1 | hg38_v1_chrX_-_30309387_30309392 | 0.76 | 3.0e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_47369301 Show fit | 2.23 |
ENST00000263735.9
|
epithelial cell adhesion molecule |
|
chr8_+_94641074 Show fit | 1.61 |
ENST00000423620.6
|
epithelial splicing regulatory protein 1 |
|
chr20_-_18057841 Show fit | 1.51 |
ENST00000278780.7
|
ovo like zinc finger 2 |
|
chr1_+_43935807 Show fit | 1.50 |
ENST00000438616.3
|
artemin |
|
chr19_-_14979676 Show fit | 1.39 |
ENST00000598504.5
ENST00000597262.1 |
solute carrier family 1 member 6 |
|
chr18_-_31042733 Show fit | 1.28 |
ENST00000360428.9
|
desmocollin 3 |
|
chr19_-_15934521 Show fit | 1.25 |
ENST00000402119.9
|
cytochrome P450 family 4 subfamily F member 11 |
|
chr17_-_3696198 Show fit | 1.21 |
ENST00000345901.7
|
purinergic receptor P2X 5 |
|
chr17_-_3696133 Show fit | 1.21 |
ENST00000225328.10
|
purinergic receptor P2X 5 |
|
chr18_-_31042808 Show fit | 1.04 |
ENST00000434452.5
|
desmocollin 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.4 | GO:0035590 | purinergic nucleotide receptor signaling pathway(GO:0035590) |
0.1 | 3.4 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.6 | 2.3 | GO:0042377 | menaquinone catabolic process(GO:0042361) vitamin K catabolic process(GO:0042377) |
0.0 | 2.3 | GO:0070268 | cornification(GO:0070268) |
0.1 | 1.9 | GO:0070886 | positive regulation of calcineurin-NFAT signaling cascade(GO:0070886) |
0.2 | 1.7 | GO:0071896 | protein localization to adherens junction(GO:0071896) |
0.3 | 1.6 | GO:0070778 | L-aspartate transport(GO:0070778) L-aspartate transmembrane transport(GO:0089712) |
0.3 | 1.5 | GO:0061146 | Peyer's patch morphogenesis(GO:0061146) lymphocyte migration into lymphoid organs(GO:0097021) |
0.3 | 1.5 | GO:0060214 | endocardium formation(GO:0060214) |
0.0 | 1.4 | GO:0032757 | positive regulation of interleukin-8 production(GO:0032757) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 3.6 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.1 | 3.3 | GO:0005639 | integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229) |
0.0 | 1.5 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.0 | 1.1 | GO:0048786 | presynaptic active zone(GO:0048786) |
0.0 | 1.0 | GO:0043194 | axon initial segment(GO:0043194) |
0.2 | 0.9 | GO:0071595 | Nem1-Spo7 phosphatase complex(GO:0071595) |
0.0 | 0.9 | GO:0005640 | nuclear outer membrane(GO:0005640) |
0.0 | 0.8 | GO:0045180 | basal cortex(GO:0045180) |
0.0 | 0.8 | GO:0030140 | trans-Golgi network transport vesicle(GO:0030140) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.4 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.3 | 3.3 | GO:0004931 | extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381) |
0.0 | 2.2 | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709) |
0.1 | 2.1 | GO:0098641 | cadherin binding involved in cell-cell adhesion(GO:0098641) |
0.2 | 1.9 | GO:0038132 | neuregulin binding(GO:0038132) |
0.2 | 1.7 | GO:0086083 | cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083) |
0.3 | 1.6 | GO:0015183 | L-aspartate transmembrane transporter activity(GO:0015183) |
0.0 | 1.4 | GO:0030296 | protein tyrosine kinase activator activity(GO:0030296) |
0.1 | 1.0 | GO:0086080 | protein binding involved in heterotypic cell-cell adhesion(GO:0086080) |
0.1 | 1.0 | GO:0015280 | ligand-gated sodium channel activity(GO:0015280) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.7 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 1.2 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.0 | 1.0 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 0.7 | ST P38 MAPK PATHWAY | p38 MAPK Pathway |
0.0 | 0.5 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.5 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 0.4 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 2.4 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.1 | 1.9 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.1 | 1.7 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 1.1 | REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Glutamate Neurotransmitter Release Cycle |
0.0 | 1.0 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.0 | 0.8 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 0.7 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 0.6 | REACTOME GRB2 SOS PROVIDES LINKAGE TO MAPK SIGNALING FOR INTERGRINS | Genes involved in GRB2:SOS provides linkage to MAPK signaling for Intergrins |
0.0 | 0.6 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |