Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR1I2 | hg38_v1_chr3_+_119782094_119782114 | -0.21 | 6.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91182652 Show fit | 6.58 |
ENST00000552145.5
ENST00000546745.5 |
decorin |
|
chr3_+_157436842 Show fit | 2.69 |
ENST00000295927.4
|
pentraxin 3 |
|
chr12_-_91182784 Show fit | 2.55 |
ENST00000547568.6
ENST00000052754.10 ENST00000552962.5 |
decorin |
|
chr1_+_222928415 Show fit | 2.49 |
ENST00000284476.7
|
dispatched RND transporter family member 1 |
|
chr12_-_55712402 Show fit | 2.43 |
ENST00000452168.6
|
integrin subunit alpha 7 |
|
chr10_+_68106109 Show fit | 2.42 |
ENST00000540630.5
ENST00000354393.6 |
myopalladin |
|
chr10_-_20897288 Show fit | 2.34 |
ENST00000377122.9
|
nebulette |
|
chr12_-_95790755 Show fit | 2.32 |
ENST00000343702.9
ENST00000344911.8 |
netrin 4 |
|
chr1_+_78490966 Show fit | 2.26 |
ENST00000370757.8
ENST00000370756.3 |
prostaglandin F receptor |
|
chr5_+_40679907 Show fit | 2.19 |
ENST00000302472.4
|
prostaglandin E receptor 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 12.8 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.1 | 4.5 | GO:0071711 | basement membrane organization(GO:0071711) |
0.1 | 4.0 | GO:0070884 | regulation of calcineurin-NFAT signaling cascade(GO:0070884) |
0.5 | 3.6 | GO:2000230 | negative regulation of pancreatic stellate cell proliferation(GO:2000230) |
0.4 | 3.1 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
0.2 | 3.0 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.3 | 2.7 | GO:0071492 | cellular response to UV-A(GO:0071492) |
0.9 | 2.6 | GO:1903015 | regulation of exo-alpha-sialidase activity(GO:1903015) |
0.1 | 2.6 | GO:0048739 | cardiac muscle fiber development(GO:0048739) |
0.0 | 2.6 | GO:0034113 | heterotypic cell-cell adhesion(GO:0034113) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 9.1 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 5.8 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 5.7 | GO:0030018 | Z disc(GO:0030018) |
0.0 | 4.1 | GO:0030175 | filopodium(GO:0030175) |
0.0 | 3.9 | GO:0005901 | caveola(GO:0005901) |
0.0 | 3.7 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
0.2 | 2.8 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.0 | 2.8 | GO:0005903 | brush border(GO:0005903) |
0.0 | 2.7 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.0 | 2.5 | GO:0008305 | integrin complex(GO:0008305) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.4 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 4.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 4.6 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 3.7 | GO:0070742 | C2H2 zinc finger domain binding(GO:0070742) |
0.3 | 3.6 | GO:0050692 | DBD domain binding(GO:0050692) |
0.1 | 3.3 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.1 | 3.1 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.1 | 2.7 | GO:0005523 | tropomyosin binding(GO:0005523) |
0.3 | 2.6 | GO:0001849 | complement component C1q binding(GO:0001849) |
0.0 | 2.6 | GO:0005227 | calcium activated cation channel activity(GO:0005227) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 10.6 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.1 | 6.0 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 4.1 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.1 | 3.4 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 3.3 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 2.5 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 2.2 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.4 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 1.2 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.0 | 1.1 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 9.1 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 7.7 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.3 | 4.5 | REACTOME PROSTANOID LIGAND RECEPTORS | Genes involved in Prostanoid ligand receptors |
0.1 | 2.4 | REACTOME EGFR DOWNREGULATION | Genes involved in EGFR downregulation |
0.0 | 2.3 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.1 | 2.2 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.1 | 1.9 | REACTOME PHOSPHORYLATION OF THE APC C | Genes involved in Phosphorylation of the APC/C |
0.0 | 1.7 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 1.6 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.5 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |