Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000205927.5 | oligodendrocyte transcription factor 2 | |
ENSG00000162992.5 | neuronal differentiation 1 | |
ENSG00000172238.6 | atonal bHLH transcription factor 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NEUROD1 | hg38_v1_chr2_-_181680490_181680525 | -0.74 | 3.7e-02 | Click! |
OLIG2 | hg38_v1_chr21_+_33025927_33025942 | 0.31 | 4.5e-01 | Click! |
ATOH1 | hg38_v1_chr4_+_93828746_93828758 | 0.26 | 5.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_113292838 Show fit | 1.05 |
ENST00000672411.1
ENST00000673231.1 |
ankyrin 2 |
|
chr4_+_113292925 Show fit | 1.03 |
ENST00000673353.1
ENST00000505342.6 ENST00000672915.1 ENST00000509550.5 |
ankyrin 2 |
|
chr8_-_134510182 Show fit | 0.99 |
ENST00000521673.5
|
zinc finger and AT-hook domain containing |
|
chr4_+_113049616 Show fit | 0.76 |
ENST00000504454.5
ENST00000357077.9 ENST00000394537.7 ENST00000672779.1 ENST00000264366.10 |
ankyrin 2 |
|
chr19_-_38253238 Show fit | 0.70 |
ENST00000587515.5
|
protein phosphatase 1 regulatory inhibitor subunit 14A |
|
chr12_+_4273751 Show fit | 0.66 |
ENST00000675880.1
ENST00000261254.8 |
cyclin D2 |
|
chr4_+_54229261 Show fit | 0.42 |
ENST00000508170.5
ENST00000512143.1 ENST00000257290.10 |
platelet derived growth factor receptor alpha |
|
chr17_+_41226648 Show fit | 0.40 |
ENST00000377721.3
|
keratin associated protein 9-2 |
|
chr22_+_44677077 Show fit | 0.33 |
ENST00000403581.5
|
proline rich 5 |
|
chr22_+_44677044 Show fit | 0.31 |
ENST00000006251.11
|
proline rich 5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.8 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
0.0 | 0.9 | GO:0060712 | spongiotrophoblast layer development(GO:0060712) |
0.0 | 0.9 | GO:0071481 | cellular response to X-ray(GO:0071481) |
0.0 | 0.9 | GO:0003254 | regulation of membrane depolarization(GO:0003254) |
0.0 | 0.8 | GO:0038203 | TORC2 signaling(GO:0038203) |
0.1 | 0.4 | GO:0072275 | metanephric glomerulus morphogenesis(GO:0072275) metanephric glomerulus vasculature morphogenesis(GO:0072276) metanephric glomerular capillary formation(GO:0072277) |
0.1 | 0.4 | GO:0001869 | regulation of complement activation, lectin pathway(GO:0001868) negative regulation of complement activation, lectin pathway(GO:0001869) |
0.0 | 0.4 | GO:0035090 | maintenance of apical/basal cell polarity(GO:0035090) maintenance of epithelial cell apical/basal polarity(GO:0045199) |
0.1 | 0.3 | GO:0002086 | diaphragm contraction(GO:0002086) |
0.1 | 0.3 | GO:0000738 | DNA catabolic process, exonucleolytic(GO:0000738) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | GO:0043034 | costamere(GO:0043034) |
0.2 | 1.0 | GO:0097129 | cyclin D2-CDK4 complex(GO:0097129) |
0.0 | 0.8 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 0.4 | GO:0016010 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.0 | 0.3 | GO:1990584 | cardiac Troponin complex(GO:1990584) |
0.0 | 0.3 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.0 | 0.1 | GO:0043512 | inhibin complex(GO:0043511) inhibin A complex(GO:0043512) |
0.0 | 0.1 | GO:0060200 | clathrin-sculpted acetylcholine transport vesicle(GO:0060200) clathrin-sculpted acetylcholine transport vesicle membrane(GO:0060201) |
0.0 | 0.1 | GO:0001940 | male pronucleus(GO:0001940) |
0.0 | 0.0 | GO:0009328 | phenylalanine-tRNA ligase complex(GO:0009328) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.2 | GO:0030507 | spectrin binding(GO:0030507) |
0.1 | 0.4 | GO:0005017 | platelet-derived growth factor-activated receptor activity(GO:0005017) |
0.0 | 0.4 | GO:0004993 | G-protein coupled serotonin receptor activity(GO:0004993) |
0.0 | 0.4 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.1 | 0.3 | GO:0008859 | exoribonuclease II activity(GO:0008859) |
0.1 | 0.3 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.0 | 0.3 | GO:0031013 | troponin I binding(GO:0031013) |
0.0 | 0.3 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.1 | 0.2 | GO:0004874 | aryl hydrocarbon receptor activity(GO:0004874) |
0.0 | 0.2 | GO:0008426 | protein kinase C inhibitor activity(GO:0008426) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.8 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.0 | 0.6 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 0.3 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 0.1 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.0 | 0.4 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.0 | 0.4 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.0 | 0.3 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.0 | 0.3 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |