Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000177468.7 | oligodendrocyte transcription factor 3 | |
ENSG00000171532.5 | neuronal differentiation 2 | |
ENSG00000178403.4 | neurogenin 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NEUROD2 | hg38_v1_chr17_-_39607876_39607966 | -0.68 | 6.3e-02 | Click! |
NEUROG2 | hg38_v1_chr4_-_112516176_112516181 | 0.63 | 9.7e-02 | Click! |
OLIG3 | hg38_v1_chr6_-_137494387_137494400 | -0.31 | 4.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91179355 Show fit | 3.68 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chr5_-_111976925 Show fit | 3.58 |
ENST00000395634.7
|
neuronal regeneration related protein |
|
chr12_-_91179472 Show fit | 3.37 |
ENST00000550099.5
ENST00000546391.5 |
decorin |
|
chr12_-_91153149 Show fit | 2.33 |
ENST00000550758.1
|
decorin |
|
chr2_-_187513641 Show fit | 2.24 |
ENST00000392365.5
ENST00000435414.5 |
tissue factor pathway inhibitor |
|
chr3_-_195583931 Show fit | 1.94 |
ENST00000343267.8
ENST00000421243.5 ENST00000453131.1 |
apolipoprotein D |
|
chr2_+_188974364 Show fit | 1.89 |
ENST00000304636.9
ENST00000317840.9 |
collagen type III alpha 1 chain |
|
chr8_-_92017637 Show fit | 1.53 |
ENST00000422361.6
|
RUNX1 partner transcriptional co-repressor 1 |
|
chr5_-_76623391 Show fit | 1.44 |
ENST00000296641.5
ENST00000504899.1 |
coagulation factor II thrombin receptor like 2 |
|
chr9_+_18474100 Show fit | 1.14 |
ENST00000327883.11
ENST00000431052.6 ENST00000380570.8 ENST00000380548.9 |
ADAMTS like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 9.8 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.2 | 2.2 | GO:0007598 | blood coagulation, extrinsic pathway(GO:0007598) |
0.6 | 1.9 | GO:2000097 | regulation of smooth muscle cell-matrix adhesion(GO:2000097) |
0.3 | 1.9 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
0.2 | 1.9 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
0.0 | 1.6 | GO:0045599 | negative regulation of fat cell differentiation(GO:0045599) |
0.1 | 1.5 | GO:0070493 | thrombin receptor signaling pathway(GO:0070493) |
0.0 | 1.5 | GO:0032728 | positive regulation of interferon-beta production(GO:0032728) |
0.0 | 1.5 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.0 | 1.3 | GO:0070884 | regulation of calcineurin-NFAT signaling cascade(GO:0070884) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 9.8 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 3.0 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 2.9 | GO:0022626 | cytosolic ribosome(GO:0022626) |
0.0 | 2.1 | GO:0031430 | M band(GO:0031430) |
0.1 | 1.9 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.2 | 1.5 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.1 | 1.3 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 1.2 | GO:0005901 | caveola(GO:0005901) |
0.2 | 0.9 | GO:0031673 | H zone(GO:0031673) |
0.0 | 0.9 | GO:0044615 | nuclear pore nuclear basket(GO:0044615) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.8 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 2.2 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.0 | 2.1 | GO:0015485 | cholesterol binding(GO:0015485) |
0.2 | 1.9 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.2 | 1.5 | GO:0015057 | thrombin receptor activity(GO:0015057) |
0.2 | 1.4 | GO:0008597 | calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597) |
0.3 | 1.3 | GO:0001512 | dihydronicotinamide riboside quinone reductase activity(GO:0001512) melatonin binding(GO:1904408) |
0.2 | 1.2 | GO:0050436 | microfibril binding(GO:0050436) |
0.1 | 1.1 | GO:0005225 | volume-sensitive anion channel activity(GO:0005225) |
0.0 | 1.0 | GO:0008494 | translation activator activity(GO:0008494) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 10.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.0 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 1.5 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 1.4 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.4 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.0 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 0.9 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 0.9 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 0.7 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 0.5 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 9.8 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.2 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.0 | 2.1 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.5 | REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS | Genes involved in Thrombin signalling through proteinase activated receptors (PARs) |
0.0 | 1.0 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.0 | 0.9 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.9 | REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS | Genes involved in Transport of Ribonucleoproteins into the Host Nucleus |
0.0 | 0.9 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.0 | 0.8 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.1 | 0.7 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |