Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
OTX1 | hg38_v1_chr2_+_63050813_63050839 | -0.30 | 4.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_111071710 Show fit | 2.01 |
ENST00000344895.4
|
thymic stromal lymphopoietin |
|
chr1_-_91886144 Show fit | 1.62 |
ENST00000212355.9
|
transforming growth factor beta receptor 3 |
|
chr17_-_19745602 Show fit | 1.52 |
ENST00000444455.5
ENST00000439102.6 |
aldehyde dehydrogenase 3 family member A1 |
|
chr5_-_147906530 Show fit | 1.21 |
ENST00000318315.5
ENST00000515291.1 |
chromosome 5 open reading frame 46 |
|
chr9_-_92482350 Show fit | 1.11 |
ENST00000375543.2
|
asporin |
|
chr9_-_92482499 Show fit | 1.02 |
ENST00000375544.7
|
asporin |
|
chr2_+_102104563 Show fit | 1.01 |
ENST00000409589.5
ENST00000409329.5 |
interleukin 1 receptor type 1 |
|
chr9_+_98943705 Show fit | 0.99 |
ENST00000610452.1
|
collagen type XV alpha 1 chain |
|
chr4_-_137532452 Show fit | 0.89 |
ENST00000412923.6
ENST00000511115.5 ENST00000344876.9 ENST00000507846.5 ENST00000510305.5 ENST00000611581.1 |
protocadherin 18 |
|
chr9_+_88991440 Show fit | 0.88 |
ENST00000358157.3
|
sphingosine-1-phosphate receptor 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.1 | GO:0070171 | negative regulation of tooth mineralization(GO:0070171) |
0.4 | 1.6 | GO:0007181 | transforming growth factor beta receptor complex assembly(GO:0007181) |
0.1 | 1.5 | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388) |
0.0 | 1.5 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.0 | 1.5 | GO:0006081 | cellular aldehyde metabolic process(GO:0006081) |
0.2 | 1.4 | GO:0046092 | deoxycytidine metabolic process(GO:0046092) |
0.1 | 1.1 | GO:0030043 | actin filament fragmentation(GO:0030043) |
0.3 | 1.0 | GO:2000661 | positive regulation of interleukin-1-mediated signaling pathway(GO:2000661) |
0.1 | 0.9 | GO:0045602 | negative regulation of endothelial cell differentiation(GO:0045602) |
0.2 | 0.8 | GO:1904566 | response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.6 | GO:0034673 | inhibin-betaglycan-ActRII complex(GO:0034673) |
0.0 | 1.5 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.1 | 1.0 | GO:0033165 | interphotoreceptor matrix(GO:0033165) |
0.1 | 1.0 | GO:0098651 | basement membrane collagen trimer(GO:0098651) |
0.0 | 0.8 | GO:0043198 | dendritic shaft(GO:0043198) |
0.1 | 0.6 | GO:0070022 | transforming growth factor beta receptor homodimeric complex(GO:0070022) |
0.0 | 0.5 | GO:0000124 | SAGA complex(GO:0000124) |
0.0 | 0.5 | GO:0097025 | MPP7-DLG1-LIN7 complex(GO:0097025) |
0.0 | 0.4 | GO:0008290 | F-actin capping protein complex(GO:0008290) |
0.0 | 0.4 | GO:0030127 | COPII vesicle coat(GO:0030127) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 1.6 | GO:0005114 | type II transforming growth factor beta receptor binding(GO:0005114) |
0.3 | 1.5 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.2 | 1.5 | GO:0000213 | tRNA-intron endonuclease activity(GO:0000213) |
0.0 | 1.5 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.2 | 1.4 | GO:0004137 | deoxycytidine kinase activity(GO:0004137) thymidine kinase activity(GO:0004797) |
0.3 | 1.0 | GO:0004909 | interleukin-1, Type I, activating receptor activity(GO:0004909) |
0.2 | 1.0 | GO:1902444 | riboflavin binding(GO:1902444) |
0.1 | 0.9 | GO:0038036 | sphingosine-1-phosphate receptor activity(GO:0038036) |
0.1 | 0.8 | GO:0035727 | lysophosphatidic acid binding(GO:0035727) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.0 | 2.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.1 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.0 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 0.9 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 0.9 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 0.6 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.5 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.4 | PID ALK2 PATHWAY | ALK2 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
0.0 | 1.0 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 0.9 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 0.6 | REACTOME GAP JUNCTION DEGRADATION | Genes involved in Gap junction degradation |
0.0 | 0.5 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.0 | 0.4 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |
0.0 | 0.4 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
0.0 | 0.3 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.0 | 0.2 | REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS | Genes involved in Membrane binding and targetting of GAG proteins |