Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PITX3 | hg38_v1_chr10_-_102241502_102241517 | -0.18 | 6.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_157436842 Show fit | 2.68 |
ENST00000295927.4
|
pentraxin 3 |
|
chr1_+_163068775 Show fit | 2.46 |
ENST00000421743.6
|
regulator of G protein signaling 4 |
|
chr13_+_101452629 Show fit | 2.15 |
ENST00000622834.4
ENST00000545560.6 ENST00000376180.8 |
integrin subunit beta like 1 |
|
chr2_-_68319887 Show fit | 2.03 |
ENST00000409862.1
ENST00000263655.4 |
cannabinoid receptor interacting protein 1 |
|
chr22_+_35383106 Show fit | 1.60 |
ENST00000678411.1
|
heme oxygenase 1 |
|
chr5_-_111976925 Show fit | 1.48 |
ENST00000395634.7
|
neuronal regeneration related protein |
|
chr13_+_101452569 Show fit | 1.38 |
ENST00000618057.4
|
integrin subunit beta like 1 |
|
chr2_+_120013068 Show fit | 1.33 |
ENST00000443902.6
ENST00000263713.10 |
erythrocyte membrane protein band 4.1 like 5 |
|
chr9_-_92424427 Show fit | 1.26 |
ENST00000375550.5
|
osteomodulin |
|
chr4_+_70050431 Show fit | 1.25 |
ENST00000511674.5
ENST00000246896.8 |
histatin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 2.6 | GO:1903015 | regulation of exo-alpha-sialidase activity(GO:1903015) |
0.0 | 2.2 | GO:0000188 | inactivation of MAPK activity(GO:0000188) |
0.1 | 2.1 | GO:0019800 | peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800) |
0.2 | 1.7 | GO:2000230 | negative regulation of pancreatic stellate cell proliferation(GO:2000230) |
0.5 | 1.6 | GO:0034395 | regulation of transcription from RNA polymerase II promoter in response to iron(GO:0034395) |
0.1 | 1.4 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
0.3 | 1.3 | GO:0021649 | vestibulocochlear nerve structural organization(GO:0021649) positive regulation of cytokine activity(GO:0060301) ganglion morphogenesis(GO:0061552) VEGF-activated neuropilin signaling pathway involved in axon guidance(GO:1902378) dorsal root ganglion morphogenesis(GO:1904835) otic placode development(GO:1905040) |
0.2 | 1.3 | GO:0043932 | ossification involved in bone remodeling(GO:0043932) |
0.1 | 1.3 | GO:0090292 | nuclear matrix anchoring at nuclear membrane(GO:0090292) |
0.1 | 1.3 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.2 | GO:0035580 | specific granule lumen(GO:0035580) |
0.0 | 2.9 | GO:0036064 | ciliary basal body(GO:0036064) |
0.0 | 2.5 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 2.3 | GO:0005901 | caveola(GO:0005901) |
0.1 | 2.1 | GO:0005883 | neurofilament(GO:0005883) |
0.0 | 1.6 | GO:0005903 | brush border(GO:0005903) |
0.0 | 1.4 | GO:0031941 | filamentous actin(GO:0031941) |
0.0 | 1.4 | GO:0005876 | spindle microtubule(GO:0005876) |
0.0 | 1.4 | GO:0030315 | T-tubule(GO:0030315) |
0.4 | 1.2 | GO:0005588 | collagen type V trimer(GO:0005588) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.9 | GO:0001849 | complement component C1q binding(GO:0001849) |
0.1 | 2.4 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.0 | 2.3 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 1.8 | GO:0005518 | collagen binding(GO:0005518) |
0.2 | 1.7 | GO:0050692 | DBD domain binding(GO:0050692) |
0.3 | 1.5 | GO:0004392 | heme oxygenase (decyclizing) activity(GO:0004392) |
0.0 | 1.5 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
0.2 | 1.3 | GO:0038085 | vascular endothelial growth factor binding(GO:0038085) |
0.1 | 1.3 | GO:0035374 | chondroitin sulfate binding(GO:0035374) |
0.1 | 1.3 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.8 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.8 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 2.1 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 2.0 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 2.0 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 1.8 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 1.6 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.1 | 1.3 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
0.0 | 1.1 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 2.6 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 2.5 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 2.4 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.1 | 2.0 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 1.5 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 1.5 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.1 | 1.4 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 1.4 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
0.0 | 1.3 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |