Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
POU2F2 | hg38_v1_chr19_-_42132465_42132480 | 0.56 | 1.5e-01 | Click! |
POU3F1 | hg38_v1_chr1_-_38046785_38046802 | -0.39 | 3.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_26124161 Show fit | 1.84 |
ENST00000377791.4
ENST00000602637.1 |
H2A clustered histone 6 |
|
chrX_-_24647091 Show fit | 1.29 |
ENST00000356768.8
|
phosphate cytidylyltransferase 1, choline, beta |
|
chr9_-_137302264 Show fit | 1.08 |
ENST00000356628.4
|
NOTCH regulated ankyrin repeat protein |
|
chrX_-_24647300 Show fit | 1.02 |
ENST00000379144.7
|
phosphate cytidylyltransferase 1, choline, beta |
|
chr18_-_55422306 Show fit | 0.85 |
ENST00000566777.5
ENST00000626584.2 |
transcription factor 4 |
|
chr18_-_55422492 Show fit | 0.83 |
ENST00000561992.5
ENST00000630712.2 |
transcription factor 4 |
|
chr7_+_18496162 Show fit | 0.79 |
ENST00000406072.5
|
histone deacetylase 9 |
|
chr7_+_16753731 Show fit | 0.76 |
ENST00000262067.5
|
tetraspanin 13 |
|
chr1_+_206557157 Show fit | 0.74 |
ENST00000577571.5
|
Ras association domain family member 5 |
|
chr6_+_37170133 Show fit | 0.70 |
ENST00000373509.6
|
Pim-1 proto-oncogene, serine/threonine kinase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.3 | GO:0006657 | CDP-choline pathway(GO:0006657) |
0.1 | 1.3 | GO:0014807 | regulation of somitogenesis(GO:0014807) |
0.0 | 1.1 | GO:0048268 | clathrin coat assembly(GO:0048268) |
0.1 | 0.8 | GO:0090050 | positive regulation of cell migration involved in sprouting angiogenesis(GO:0090050) |
0.1 | 0.7 | GO:0070561 | vitamin D receptor signaling pathway(GO:0070561) |
0.0 | 0.7 | GO:0045063 | T-helper 1 cell differentiation(GO:0045063) |
0.2 | 0.6 | GO:0003409 | optic cup structural organization(GO:0003409) |
0.1 | 0.6 | GO:0038018 | Wnt receptor catabolic process(GO:0038018) |
0.2 | 0.5 | GO:0060557 | positive regulation of vitamin metabolic process(GO:0046136) positive regulation of vitamin D biosynthetic process(GO:0060557) positive regulation of calcidiol 1-monooxygenase activity(GO:0060559) |
0.1 | 0.5 | GO:0036486 | trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0043511 | inhibin complex(GO:0043511) inhibin A complex(GO:0043512) |
0.1 | 0.4 | GO:0034666 | integrin alpha2-beta1 complex(GO:0034666) |
0.1 | 0.4 | GO:1990031 | pinceau fiber(GO:1990031) |
0.0 | 0.3 | GO:0072687 | CatSper complex(GO:0036128) meiotic spindle(GO:0072687) |
0.0 | 0.3 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) |
0.0 | 0.3 | GO:0061700 | GATOR2 complex(GO:0061700) |
0.0 | 0.2 | GO:0033269 | internode region of axon(GO:0033269) |
0.0 | 0.2 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.0 | 0.1 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.0 | 0.0 | GO:0071752 | dimeric IgA immunoglobulin complex(GO:0071750) secretory dimeric IgA immunoglobulin complex(GO:0071752) IgM immunoglobulin complex(GO:0071753) IgM immunoglobulin complex, circulating(GO:0071754) pentameric IgM immunoglobulin complex(GO:0071756) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.4 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.5 | 2.3 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
0.1 | 1.2 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.0 | 1.2 | GO:0038191 | neuropilin binding(GO:0038191) |
0.1 | 1.1 | GO:0035612 | AP-2 adaptor complex binding(GO:0035612) |
0.1 | 1.0 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.0 | 0.8 | GO:0031078 | histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) |
0.0 | 0.8 | GO:0004407 | histone deacetylase activity(GO:0004407) |
0.0 | 0.7 | GO:0043024 | ribosomal small subunit binding(GO:0043024) |
0.0 | 0.7 | GO:0005109 | frizzled binding(GO:0005109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 1.1 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 1.0 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.0 | 0.8 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.0 | 0.5 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 0.4 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 0.2 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 0.2 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.1 | 2.3 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.4 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.0 | 1.2 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 0.6 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.4 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.0 | 0.4 | REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS | Genes involved in Activation of the AP-1 family of transcription factors |
0.0 | 0.4 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.0 | 0.4 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.0 | 0.4 | REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA | Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha |