Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
POU5F1 | hg38_v1_chr6_-_31170620_31170698 | -0.07 | 8.7e-01 | Click! |
POU2F3 | hg38_v1_chr11_+_120240135_120240199, hg38_v1_chr11_+_120236635_120236642 | -0.05 | 9.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_91946989 Show fit | 1.90 |
ENST00000556154.5
|
fibulin 5 |
|
chr14_-_91947383 Show fit | 1.66 |
ENST00000267620.14
|
fibulin 5 |
|
chr12_-_91180365 Show fit | 1.65 |
ENST00000547937.5
|
decorin |
|
chr2_+_188974364 Show fit | 1.31 |
ENST00000304636.9
ENST00000317840.9 |
collagen type III alpha 1 chain |
|
chr19_-_43619591 Show fit | 1.21 |
ENST00000598676.1
ENST00000300811.8 |
zinc finger protein 428 |
|
chr12_-_91179355 Show fit | 1.08 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chrX_+_81202066 Show fit | 1.02 |
ENST00000373212.6
|
SH3 domain binding glutamate rich protein like |
|
chr5_+_120531464 Show fit | 1.00 |
ENST00000505123.5
|
proline rich 16 |
|
chr2_-_187554351 Show fit | 0.99 |
ENST00000437725.5
ENST00000409676.5 ENST00000233156.9 ENST00000339091.8 ENST00000420747.1 |
tissue factor pathway inhibitor |
|
chr4_+_123399488 Show fit | 0.99 |
ENST00000394339.2
|
sprouty RTK signaling antagonist 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.9 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.4 | 4.5 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.2 | 1.7 | GO:0021678 | third ventricle development(GO:0021678) |
0.2 | 1.6 | GO:0070236 | negative regulation of activation-induced cell death of T cells(GO:0070236) |
0.0 | 1.5 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.1 | 1.3 | GO:0007598 | blood coagulation, extrinsic pathway(GO:0007598) |
0.0 | 1.2 | GO:0090231 | regulation of spindle checkpoint(GO:0090231) |
0.0 | 1.2 | GO:0072189 | ureter development(GO:0072189) |
0.0 | 1.2 | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) |
0.0 | 1.2 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.0 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.5 | 4.5 | GO:0071953 | elastic fiber(GO:0071953) |
0.1 | 1.3 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 1.2 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.2 | 1.0 | GO:0034680 | integrin alpha10-beta1 complex(GO:0034680) |
0.0 | 0.6 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 0.6 | GO:0016592 | mediator complex(GO:0016592) |
0.1 | 0.4 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.1 | 0.4 | GO:0000308 | cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308) |
0.0 | 0.4 | GO:0000813 | ESCRT I complex(GO:0000813) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 3.8 | GO:0005178 | integrin binding(GO:0005178) |
0.2 | 1.6 | GO:0043426 | MRF binding(GO:0043426) |
0.1 | 1.2 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.0 | 1.2 | GO:0005528 | macrolide binding(GO:0005527) FK506 binding(GO:0005528) |
0.0 | 1.1 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 1.0 | GO:0098639 | collagen binding involved in cell-matrix adhesion(GO:0098639) |
0.1 | 1.0 | GO:0050692 | DBD domain binding(GO:0050692) |
0.0 | 0.8 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.1 | 0.7 | GO:0044323 | retinoic acid-responsive element binding(GO:0044323) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.8 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 5.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.3 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.0 | 1.3 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 1.3 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 1.2 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.1 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 0.9 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 0.7 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 0.6 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.0 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.9 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.0 | 1.6 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.3 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.0 | 1.1 | REACTOME EGFR DOWNREGULATION | Genes involved in EGFR downregulation |
0.0 | 0.6 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 0.6 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.0 | 0.6 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 0.6 | REACTOME ACETYLCHOLINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Acetylcholine Neurotransmitter Release Cycle |
0.0 | 0.4 | REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION | Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion |