Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PRDM1 | hg38_v1_chr6_+_106098933_106098958 | -0.93 | 6.7e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_+_101452629 Show fit | 1.08 |
ENST00000622834.4
ENST00000545560.6 ENST00000376180.8 |
integrin subunit beta like 1 |
|
chr8_+_96493803 Show fit | 1.01 |
ENST00000518385.5
ENST00000302190.9 |
syndecan 2 |
|
chr5_+_93583212 Show fit | 0.82 |
ENST00000327111.8
|
nuclear receptor subfamily 2 group F member 1 |
|
chr11_-_27722021 Show fit | 0.61 |
ENST00000314915.6
|
brain derived neurotrophic factor |
|
chr6_-_166862502 Show fit | 0.60 |
ENST00000510118.5
ENST00000503859.5 ENST00000506565.1 |
ribosomal protein S6 kinase A2 |
|
chr9_+_18474100 Show fit | 0.58 |
ENST00000327883.11
ENST00000431052.6 ENST00000380570.8 ENST00000380548.9 |
ADAMTS like 1 |
|
chr4_+_125314918 Show fit | 0.57 |
ENST00000674496.2
ENST00000394329.9 |
FAT atypical cadherin 4 |
|
chr3_+_69866217 Show fit | 0.54 |
ENST00000314589.10
|
melanocyte inducing transcription factor |
|
chr17_+_43006740 Show fit | 0.51 |
ENST00000438323.2
ENST00000415816.7 |
interferon induced protein 35 |
|
chrX_-_119693150 Show fit | 0.49 |
ENST00000394610.7
|
septin 6 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | GO:0050690 | regulation of defense response to virus by virus(GO:0050690) |
0.1 | 1.1 | GO:0036066 | protein O-linked fucosylation(GO:0036066) |
0.0 | 1.1 | GO:0006521 | regulation of cellular amino acid metabolic process(GO:0006521) |
0.2 | 1.0 | GO:0008218 | bioluminescence(GO:0008218) |
0.3 | 0.9 | GO:0045062 | extrathymic T cell selection(GO:0045062) |
0.2 | 0.6 | GO:0031550 | positive regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031550) |
0.1 | 0.6 | GO:0072137 | condensed mesenchymal cell proliferation(GO:0072137) |
0.1 | 0.6 | GO:0007256 | activation of JNKK activity(GO:0007256) |
0.1 | 0.5 | GO:1990166 | protein localization to site of double-strand break(GO:1990166) |
0.0 | 0.5 | GO:0006607 | NLS-bearing protein import into nucleus(GO:0006607) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | GO:0030669 | clathrin-coated endocytic vesicle membrane(GO:0030669) |
0.1 | 0.6 | GO:1990111 | spermatoproteasome complex(GO:1990111) |
0.1 | 0.5 | GO:0008537 | proteasome activator complex(GO:0008537) |
0.0 | 0.5 | GO:0035861 | site of double-strand break(GO:0035861) |
0.1 | 0.2 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.0 | 0.2 | GO:0031465 | Cul4B-RING E3 ubiquitin ligase complex(GO:0031465) |
0.0 | 0.2 | GO:0030870 | Mre11 complex(GO:0030870) |
0.0 | 0.2 | GO:0031618 | nuclear pericentric heterochromatin(GO:0031618) |
0.0 | 0.2 | GO:0030478 | actin cap(GO:0030478) |
0.0 | 0.1 | GO:1990682 | CSF1-CSF1R complex(GO:1990682) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.8 | GO:0044323 | retinoic acid-responsive element binding(GO:0044323) |
0.2 | 0.6 | GO:0005169 | neurotrophin TRKB receptor binding(GO:0005169) |
0.0 | 0.6 | GO:0004298 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
0.0 | 0.6 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.1 | 0.5 | GO:0003910 | DNA ligase (ATP) activity(GO:0003910) |
0.1 | 0.5 | GO:0061133 | endopeptidase activator activity(GO:0061133) |
0.1 | 0.4 | GO:0042007 | interleukin-18 binding(GO:0042007) |
0.1 | 0.4 | GO:0004839 | ubiquitin activating enzyme activity(GO:0004839) |
0.0 | 0.4 | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
0.0 | 0.4 | GO:0061578 | Lys63-specific deubiquitinase activity(GO:0061578) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.9 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.0 | 0.6 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES | Genes involved in Cross-presentation of soluble exogenous antigens (endosomes) |
0.0 | 1.0 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.0 | 0.8 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.0 | 0.7 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 0.6 | REACTOME RNA POL I TRANSCRIPTION INITIATION | Genes involved in RNA Polymerase I Transcription Initiation |
0.0 | 0.6 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.0 | 0.4 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.0 | 0.1 | REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 | Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1 |
0.0 | 0.1 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |