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Epithelial-Mesenchymal Transition, human (Scheel, 2011)

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Results for RARA

Z-value: 0.33

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Transcription factors associated with RARA

Gene Symbol Gene ID Gene Info
RARA
ENSG00000131759.18 retinoic acid receptor alpha

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
RARAhg38_v1_chr17_+_40318237_403182990.147.3e-01Click!

Activity profile of RARA motif

Sorted Z-values of RARA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr6_+_54846735 0.41 ENST00000306858.8
FAM83B
family with sequence similarity 83 member B
chr10_-_133276855 0.38 ENST00000486609.1
ENST00000445355.8
ENST00000485491.6
ADAM8
ADAM metallopeptidase domain 8
chr10_-_133276836 0.37 ENST00000415217.7
ADAM8
ADAM metallopeptidase domain 8
chr19_-_51001138 0.37 ENST00000593490.1
KLK8
kallikrein related peptidase 8
chr18_+_23949847 0.36 ENST00000588004.1
LAMA3
laminin subunit alpha 3
chr10_+_80413817 0.34 ENST00000372187.9
PRXL2A
peroxiredoxin like 2A
chr19_-_6720641 0.33 ENST00000245907.11
C3
complement C3
chr3_-_69386079 0.28 ENST00000398540.8
FRMD4B
FERM domain containing 4B
chr16_+_71626175 0.26 ENST00000268485.8
ENST00000565261.1
ENST00000299952.4
MARVELD3
MARVEL domain containing 3
chr6_-_136526654 0.26 ENST00000611373.1
MAP7
microtubule associated protein 7
chr19_-_6767420 0.25 ENST00000245908.11
ENST00000437152.7
ENST00000597687.1
SH2D3A
SH2 domain containing 3A
chr10_+_80408485 0.24 ENST00000615554.4
ENST00000372185.5
PRXL2A
peroxiredoxin like 2A
chr2_-_234497035 0.23 ENST00000390645.2
ENST00000339728.6
ARL4C
ADP ribosylation factor like GTPase 4C
chr11_-_88337722 0.22 ENST00000677976.1
ENST00000528020.2
ENST00000393301.5
ENST00000529974.2
ENST00000227266.10
ENST00000678464.1
ENST00000679199.1
ENST00000527018.6
ENST00000679224.1
ENST00000678506.1
ENST00000678915.1
ENST00000524463.6
CTSC
cathepsin C
chr1_+_61742418 0.22 ENST00000316485.11
ENST00000371158.6
ENST00000642238.2
ENST00000613764.4
PATJ
PATJ crumbs cell polarity complex component
chr1_+_13585453 0.22 ENST00000487038.5
ENST00000475043.5
PDPN
podoplanin
chr16_+_71626149 0.21 ENST00000567566.1
MARVELD3
MARVEL domain containing 3
chr2_+_222424520 0.21 ENST00000321276.8
SGPP2
sphingosine-1-phosphate phosphatase 2
chr22_+_44677044 0.20 ENST00000006251.11
PRR5
proline rich 5
chr22_+_44677077 0.20 ENST00000403581.5
PRR5
proline rich 5
chr8_-_22133356 0.19 ENST00000680789.1
HR
HR lysine demethylase and nuclear receptor corepressor
chr5_-_16508858 0.19 ENST00000684456.1
RETREG1
reticulophagy regulator 1
chr5_-_16508951 0.18 ENST00000682628.1
RETREG1
reticulophagy regulator 1
chr5_-_16508812 0.18 ENST00000683414.1
RETREG1
reticulophagy regulator 1
chr11_+_62881686 0.18 ENST00000536981.6
ENST00000539891.6
SLC3A2
solute carrier family 3 member 2
chr6_+_7541662 0.18 ENST00000379802.8
DSP
desmoplakin
chr17_-_35795592 0.17 ENST00000615136.4
ENST00000605424.6
ENST00000612672.1
MMP28
matrix metallopeptidase 28
chr15_-_34367159 0.16 ENST00000314891.11
LPCAT4
lysophosphatidylcholine acyltransferase 4
chr16_+_4788394 0.16 ENST00000615471.4
ENST00000589721.5
ENST00000615889.4
SMIM22
small integral membrane protein 22
chr22_+_50185894 0.16 ENST00000380909.9
ENST00000303434.8
TRABD
TraB domain containing
chr10_+_80408503 0.16 ENST00000606162.6
PRXL2A
peroxiredoxin like 2A
chr14_-_37595224 0.15 ENST00000250448.5
FOXA1
forkhead box A1
chr2_+_219627565 0.15 ENST00000273063.10
SLC4A3
solute carrier family 4 member 3
chr2_+_219627650 0.15 ENST00000317151.7
SLC4A3
solute carrier family 4 member 3
chr5_-_16508990 0.15 ENST00000399793.6
RETREG1
reticulophagy regulator 1
chr11_+_1838970 0.15 ENST00000381911.6
TNNI2
troponin I2, fast skeletal type
chr12_-_84912705 0.15 ENST00000679933.1
ENST00000680260.1
ENST00000551010.2
ENST00000679453.1
ENST00000681281.1
SLC6A15
solute carrier family 6 member 15
chr9_+_98807619 0.15 ENST00000375011.4
GALNT12
polypeptide N-acetylgalactosaminyltransferase 12
chr5_-_16508788 0.15 ENST00000682142.1
RETREG1
reticulophagy regulator 1
chr2_+_219627622 0.15 ENST00000358055.8
SLC4A3
solute carrier family 4 member 3
chr22_+_44676808 0.15 ENST00000624862.3
PRR5
proline rich 5
chr15_-_34367045 0.14 ENST00000617710.4
LPCAT4
lysophosphatidylcholine acyltransferase 4
chr1_-_92961440 0.14 ENST00000370310.5
ENST00000615519.4
ENST00000613902.4
ENST00000616709.4
DIPK1A
divergent protein kinase domain 1A
chr18_-_46072244 0.14 ENST00000589328.5
ENST00000409746.5
PSTPIP2
proline-serine-threonine phosphatase interacting protein 2
chr11_+_6845683 0.14 ENST00000299454.5
OR10A5
olfactory receptor family 10 subfamily A member 5
chr16_+_4788411 0.13 ENST00000589327.5
SMIM22
small integral membrane protein 22
chr1_-_156816841 0.13 ENST00000368199.8
ENST00000392306.2
SH2D2A
SH2 domain containing 2A
chr14_+_67619911 0.13 ENST00000261783.4
ARG2
arginase 2
chrX_-_101407893 0.13 ENST00000676156.1
ENST00000675592.1
ENST00000674634.2
ENST00000649178.1
ENST00000218516.4
GLA
galactosidase alpha
chr8_-_544825 0.13 ENST00000324079.11
TDRP
testis development related protein
chrX_-_8732116 0.12 ENST00000262648.8
ANOS1
anosmin 1
chr8_-_65842051 0.12 ENST00000401827.8
PDE7A
phosphodiesterase 7A
chr1_-_160098593 0.12 ENST00000314485.12
IGSF8
immunoglobulin superfamily member 8
chr1_-_156816738 0.12 ENST00000368198.7
SH2D2A
SH2 domain containing 2A
chr17_+_7445491 0.12 ENST00000536404.6
ENST00000576360.1
CHRNB1
cholinergic receptor nicotinic beta 1 subunit
chr16_+_527698 0.12 ENST00000219611.7
ENST00000562370.5
ENST00000568988.5
CAPN15
calpain 15
chr19_-_1822038 0.12 ENST00000643515.1
REXO1
RNA exonuclease 1 homolog
chr17_+_80101562 0.12 ENST00000302262.8
ENST00000577106.5
ENST00000390015.7
GAA
alpha glucosidase
chr10_-_102120246 0.12 ENST00000425280.2
LDB1
LIM domain binding 1
chr2_+_170816868 0.12 ENST00000358196.8
GAD1
glutamate decarboxylase 1
chr9_+_111631300 0.11 ENST00000313525.4
DNAJC25
DnaJ heat shock protein family (Hsp40) member C25
chr22_+_37906275 0.11 ENST00000215957.10
ENST00000445494.6
ENST00000680578.1
ENST00000424008.2
MICALL1
MICAL like 1
chr6_+_95577465 0.11 ENST00000369293.6
ENST00000683151.1
ENST00000358812.9
MANEA
mannosidase endo-alpha
chr9_+_136886490 0.10 ENST00000247668.7
TRAF2
TNF receptor associated factor 2
chr2_-_207166818 0.10 ENST00000423015.5
KLF7
Kruppel like factor 7
chr1_+_11736120 0.10 ENST00000400895.6
ENST00000314340.10
ENST00000376629.8
ENST00000376627.6
ENST00000452018.6
ENST00000510878.1
AGTRAP
angiotensin II receptor associated protein
chr17_+_32486975 0.10 ENST00000313401.4
CDK5R1
cyclin dependent kinase 5 regulatory subunit 1
chr8_-_42541898 0.10 ENST00000342228.7
SLC20A2
solute carrier family 20 member 2
chr21_-_45542414 0.09 ENST00000311124.9
SLC19A1
solute carrier family 19 member 1
chr2_-_96145431 0.09 ENST00000288943.5
DUSP2
dual specificity phosphatase 2
chr14_+_24171853 0.09 ENST00000620473.4
ENST00000557806.5
ENST00000611366.5
REC8
REC8 meiotic recombination protein
chr15_+_30083053 0.09 ENST00000567927.1
GOLGA8J
golgin A8 family member J
chr10_-_102120318 0.08 ENST00000673968.1
LDB1
LIM domain binding 1
chr16_+_50065959 0.08 ENST00000299192.8
HEATR3
HEAT repeat containing 3
chr21_-_41767042 0.08 ENST00000332512.8
RIPK4
receptor interacting serine/threonine kinase 4
chr4_-_25862979 0.08 ENST00000399878.8
SEL1L3
SEL1L family member 3
chr19_+_7637099 0.08 ENST00000595950.5
ENST00000221283.10
ENST00000441779.6
ENST00000414284.6
STXBP2
syntaxin binding protein 2
chr1_-_94541636 0.08 ENST00000370207.4
F3
coagulation factor III, tissue factor
chr1_-_222589759 0.08 ENST00000391883.2
ENST00000366890.5
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A
chr16_-_11742739 0.08 ENST00000356957.7
ENST00000283033.10
TXNDC11
thioredoxin domain containing 11
chr11_+_1834804 0.08 ENST00000341958.3
SYT8
synaptotagmin 8
chr9_-_33264678 0.08 ENST00000635077.1
ENST00000634734.3
BAG1
BAG cochaperone 1
chr15_+_73683938 0.08 ENST00000567189.5
CD276
CD276 molecule
chr11_+_450255 0.08 ENST00000308020.6
PTDSS2
phosphatidylserine synthase 2
chr1_-_161044941 0.08 ENST00000368020.5
USF1
upstream transcription factor 1
chrX_+_153072454 0.08 ENST00000421798.5
PNMA6A
PNMA family member 6A
chr6_-_145964330 0.08 ENST00000275233.12
ENST00000367505.6
SHPRH
SNF2 histone linker PHD RING helicase
chr8_-_129786617 0.08 ENST00000276708.9
GSDMC
gasdermin C
chr8_+_97869040 0.08 ENST00000254898.7
ENST00000524308.5
ENST00000522025.6
MATN2
matrilin 2
chr19_-_1174227 0.08 ENST00000587024.5
ENST00000361757.8
SBNO2
strawberry notch homolog 2
chr4_-_2934790 0.07 ENST00000508221.5
ENST00000355443.9
ENST00000507555.1
MFSD10
major facilitator superfamily domain containing 10
chr1_-_112956063 0.07 ENST00000538576.5
ENST00000369626.8
ENST00000458229.6
SLC16A1
solute carrier family 16 member 1
chr15_-_28712323 0.07 ENST00000563027.1
GOLGA8M
golgin A8 family member M
chr1_+_28914515 0.07 ENST00000644600.1
ENST00000643173.1
ENST00000648181.1
ENST00000650265.1
ENST00000644780.1
ENST00000343067.9
ENST00000643604.1
ENST00000373797.2
EPB41
erythrocyte membrane protein band 4.1
chr21_-_41767071 0.07 ENST00000352483.3
RIPK4
receptor interacting serine/threonine kinase 4
chr8_-_123025750 0.07 ENST00000523036.1
DERL1
derlin 1
chr17_-_2711633 0.07 ENST00000435359.5
CLUH
clustered mitochondria homolog
chr19_-_18438120 0.07 ENST00000338128.13
ENST00000578352.5
ISYNA1
inositol-3-phosphate synthase 1
chr6_-_145964084 0.07 ENST00000438092.6
ENST00000629427.2
SHPRH
SNF2 histone linker PHD RING helicase
chr4_+_176319942 0.07 ENST00000503362.2
SPCS3
signal peptidase complex subunit 3
chr3_-_55487295 0.07 ENST00000264634.9
WNT5A
Wnt family member 5A
chr12_+_122203740 0.07 ENST00000537991.1
B3GNT4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
chr10_+_69802424 0.07 ENST00000673802.2
ENST00000517713.5
ENST00000520133.5
ENST00000522165.5
ENST00000673641.2
ENST00000673628.2
COL13A1
collagen type XIII alpha 1 chain
chr4_+_1793776 0.07 ENST00000352904.6
FGFR3
fibroblast growth factor receptor 3
chr11_+_63839005 0.07 ENST00000508192.5
ENST00000361128.9
MARK2
microtubule affinity regulating kinase 2
chr22_+_21642287 0.07 ENST00000248958.5
SDF2L1
stromal cell derived factor 2 like 1
chr11_+_1834415 0.07 ENST00000381968.7
ENST00000381978.7
SYT8
synaptotagmin 8
chr8_-_53251412 0.07 ENST00000520287.5
OPRK1
opioid receptor kappa 1
chr1_-_9823953 0.07 ENST00000377298.9
ENST00000361311.4
CLSTN1
calsyntenin 1
chr1_-_39901861 0.07 ENST00000372816.3
ENST00000372815.1
MYCL
MYCL proto-oncogene, bHLH transcription factor
chr1_-_204494752 0.07 ENST00000684373.1
PIK3C2B
phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
chr17_-_59707404 0.07 ENST00000393038.3
PTRH2
peptidyl-tRNA hydrolase 2
chr1_+_160739265 0.07 ENST00000368042.7
SLAMF7
SLAM family member 7
chr17_-_82065783 0.07 ENST00000578907.5
ENST00000577907.1
ENST00000578176.5
ENST00000306796.10
ENST00000582529.5
DUS1L
dihydrouridine synthase 1 like
chr17_-_63446260 0.07 ENST00000448884.6
ENST00000582297.5
ENST00000360793.8
ENST00000582034.5
ENST00000578072.1
CYB561
cytochrome b561
chr11_+_63369779 0.06 ENST00000279178.4
SLC22A9
solute carrier family 22 member 9
chr1_-_222589898 0.06 ENST00000350027.8
ENST00000352967.9
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A
chr7_-_157010615 0.06 ENST00000252971.11
MNX1
motor neuron and pancreas homeobox 1
chr17_+_82735551 0.06 ENST00000300784.8
FN3K
fructosamine 3 kinase
chr4_+_8199239 0.06 ENST00000245105.8
SH3TC1
SH3 domain and tetratricopeptide repeats 1
chr9_+_99105098 0.06 ENST00000374990.6
ENST00000374994.9
ENST00000552516.5
TGFBR1
transforming growth factor beta receptor 1
chr4_+_8199363 0.06 ENST00000382521.7
ENST00000457650.7
SH3TC1
SH3 domain and tetratricopeptide repeats 1
chr12_+_53097656 0.06 ENST00000301464.4
IGFBP6
insulin like growth factor binding protein 6
chr9_+_122519141 0.06 ENST00000340750.1
OR1J4
olfactory receptor family 1 subfamily J member 4
chr5_-_88268801 0.06 ENST00000506536.5
ENST00000512429.5
ENST00000514135.5
ENST00000296595.11
ENST00000509387.5
TMEM161B
transmembrane protein 161B
chr13_-_29595670 0.06 ENST00000380752.10
SLC7A1
solute carrier family 7 member 1
chr1_-_156082412 0.06 ENST00000532414.3
MEX3A
mex-3 RNA binding family member A
chr15_+_28378664 0.06 ENST00000532622.7
ENST00000526619.6
GOLGA8F
golgin A8 family member F
chr11_+_67391975 0.06 ENST00000307980.7
RAD9A
RAD9 checkpoint clamp component A
chr1_-_156705575 0.06 ENST00000368222.8
CRABP2
cellular retinoic acid binding protein 2
chr1_-_39901996 0.06 ENST00000397332.2
MYCL
MYCL proto-oncogene, bHLH transcription factor
chr17_-_4560564 0.06 ENST00000574584.1
ENST00000381550.8
ENST00000301395.7
GGT6
gamma-glutamyltransferase 6
chr3_+_40387175 0.06 ENST00000301825.8
ENTPD3
ectonucleoside triphosphate diphosphohydrolase 3
chr11_+_63839086 0.06 ENST00000350490.11
ENST00000402010.8
MARK2
microtubule affinity regulating kinase 2
chr7_-_149028452 0.06 ENST00000413966.1
ENST00000652332.1
PDIA4
protein disulfide isomerase family A member 4
chr14_-_22929356 0.06 ENST00000397440.8
ENST00000627278.1
ENST00000421938.2
ENST00000324366.13
ENST00000554867.5
ENST00000556616.5
ENST00000216350.12
ENST00000553550.5
ENST00000397441.6
ENST00000553897.5
PRMT5
protein arginine methyltransferase 5
chr14_-_106622837 0.06 ENST00000390628.3
IGHV1-58
immunoglobulin heavy variable 1-58
chr5_+_66144204 0.06 ENST00000612404.4
SREK1
splicing regulatory glutamic acid and lysine rich protein 1
chr12_+_132490140 0.06 ENST00000680143.1
FBRSL1
fibrosin like 1
chr9_-_101383558 0.05 ENST00000674556.1
BAAT
bile acid-CoA:amino acid N-acyltransferase
chr2_-_240140649 0.05 ENST00000319460.2
OTOS
otospiralin
chr16_+_22008083 0.05 ENST00000542527.7
ENST00000569656.5
ENST00000562695.1
MOSMO
modulator of smoothened
chr16_-_11256192 0.05 ENST00000644787.1
ENST00000332029.4
SOCS1
suppressor of cytokine signaling 1
chr12_+_51238854 0.05 ENST00000549732.6
ENST00000604900.5
DAZAP2
DAZ associated protein 2
chr9_+_129036614 0.05 ENST00000684074.1
MIGA2
mitoguardin 2
chr1_+_45500287 0.05 ENST00000401061.9
ENST00000616135.1
MMACHC
metabolism of cobalamin associated C
chr1_-_37765105 0.05 ENST00000373048.9
ENST00000319637.6
EPHA10
EPH receptor A10
chr11_+_63839173 0.05 ENST00000502399.7
ENST00000425897.3
ENST00000513765.7
ENST00000679216.1
MARK2
microtubule affinity regulating kinase 2
chr1_-_200410001 0.05 ENST00000367353.2
ZNF281
zinc finger protein 281
chr4_+_145098269 0.05 ENST00000502586.5
ENST00000296577.9
ABCE1
ATP binding cassette subfamily E member 1
chr1_-_200410052 0.05 ENST00000294740.3
ZNF281
zinc finger protein 281
chr19_-_48044037 0.05 ENST00000293255.3
CABP5
calcium binding protein 5
chr1_+_32741779 0.05 ENST00000401073.7
KIAA1522
KIAA1522
chr2_-_207167220 0.05 ENST00000421199.5
ENST00000457962.5
KLF7
Kruppel like factor 7
chr12_-_48716675 0.05 ENST00000261900.8
ENST00000640148.1
CCNT1
cyclin T1
chr1_-_200409976 0.05 ENST00000367352.3
ZNF281
zinc finger protein 281
chr11_-_75525925 0.05 ENST00000336898.8
GDPD5
glycerophosphodiester phosphodiesterase domain containing 5
chr12_+_122203681 0.05 ENST00000546192.1
ENST00000324189.5
B3GNT4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
chrX_-_30309387 0.05 ENST00000378970.5
NR0B1
nuclear receptor subfamily 0 group B member 1
chr5_-_115625972 0.05 ENST00000333314.3
ENST00000456936.4
TMED7-TICAM2
TMED7
TMED7-TICAM2 readthrough
transmembrane p24 trafficking protein 7
chr1_-_94541746 0.05 ENST00000334047.12
F3
coagulation factor III, tissue factor
chr9_-_37025733 0.05 ENST00000651550.1
PAX5
paired box 5
chr6_+_29942523 0.05 ENST00000376809.10
ENST00000376802.2
ENST00000638375.1
HLA-A
major histocompatibility complex, class I, A
chr21_+_33229883 0.05 ENST00000382264.7
ENST00000342136.9
ENST00000404220.7
IFNAR2
interferon alpha and beta receptor subunit 2
chr2_+_218568865 0.05 ENST00000295701.9
CNOT9
CCR4-NOT transcription complex subunit 9
chr19_+_40799155 0.05 ENST00000303961.9
EGLN2
egl-9 family hypoxia inducible factor 2
chr17_-_2711736 0.05 ENST00000651024.2
ENST00000576885.5
ENST00000574426.7
CLUH
clustered mitochondria homolog
chr6_+_110982028 0.05 ENST00000441448.7
RPF2
ribosome production factor 2 homolog
chr19_-_12881429 0.05 ENST00000222219.8
DNASE2
deoxyribonuclease 2, lysosomal
chr14_+_105491226 0.05 ENST00000451719.5
ENST00000392523.9
ENST00000392522.7
ENST00000354560.10
ENST00000334656.11
ENST00000450383.1
TEDC1
tubulin epsilon and delta complex 1
chr16_-_15094249 0.05 ENST00000429751.6
ENST00000564131.1
ENST00000198767.11
ENST00000563559.5
RRN3
RRN3 homolog, RNA polymerase I transcription factor
chr7_+_156949704 0.05 ENST00000275820.4
NOM1
nucleolar protein with MIF4G domain 1
chr9_+_122264857 0.05 ENST00000344641.8
ENST00000441707.5
ENST00000373723.9
ENST00000373729.5
MRRF
mitochondrial ribosome recycling factor
chr5_+_87267792 0.04 ENST00000274376.11
RASA1
RAS p21 protein activator 1
chr2_-_42792558 0.04 ENST00000431905.1
ENST00000294973.11
HAAO
3-hydroxyanthranilate 3,4-dioxygenase
chr16_+_14833713 0.04 ENST00000287667.12
ENST00000620755.4
ENST00000610363.4
NOMO1
NODAL modulator 1
chr20_+_44337043 0.04 ENST00000217043.4
R3HDML
R3H domain containing like
chr15_+_74615808 0.04 ENST00000395066.9
ENST00000568139.6
ENST00000563297.5
ENST00000568488.6
CLK3
CDC like kinase 3
chr1_+_23743462 0.04 ENST00000609199.1
ELOA
elongin A
chr14_+_20469399 0.04 ENST00000361505.10
ENST00000553591.1
PNP
purine nucleoside phosphorylase
chr20_-_51802509 0.04 ENST00000371539.7
ENST00000217086.9
SALL4
spalt like transcription factor 4
chr11_+_66257696 0.04 ENST00000421552.5
ENST00000394067.7
ENST00000316924.9
ENST00000394078.5
KLC2
kinesin light chain 2
chr11_+_64241053 0.04 ENST00000309366.9
ENST00000449942.6
ENST00000652762.2
FKBP2
ENSG00000286264.2
FKBP prolyl isomerase 2
novel protein
chr19_+_43827341 0.04 ENST00000588797.6
ENST00000650832.1
ZNF283
zinc finger protein 283
chr19_-_17245889 0.04 ENST00000291442.4
NR2F6
nuclear receptor subfamily 2 group F member 6
chr15_+_44728985 0.04 ENST00000559390.5
TRIM69
tripartite motif containing 69
chr22_-_38317423 0.04 ENST00000396832.6
ENST00000403904.5
ENST00000405675.7
CSNK1E
casein kinase 1 epsilon
chr7_-_106112205 0.04 ENST00000470347.1
ENST00000455385.7
SYPL1
synaptophysin like 1
chr11_-_71928624 0.04 ENST00000533047.5
ENST00000529844.5
ENSG00000254469.9
novel protein similar to transient receptor potential cation channel, subfamily C, member 2 TRPC2
chr11_-_84720876 0.04 ENST00000648622.1
DLG2
discs large MAGUK scaffold protein 2
chr8_-_123274433 0.04 ENST00000297857.3
ZHX1
zinc fingers and homeoboxes 1
chr5_+_127649018 0.04 ENST00000379445.7
CTXN3
cortexin 3
chrX_+_23908006 0.04 ENST00000379211.8
ENST00000648352.1
CXorf58
chromosome X open reading frame 58
chr8_+_27491125 0.04 ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
ENST00000380476.7
ENST00000518379.5
ENST00000521684.1
EPHX2
epoxide hydrolase 2
chr1_+_32362537 0.04 ENST00000373534.4
TSSK3
testis specific serine kinase 3
chr5_+_151259793 0.04 ENST00000523004.1
GM2A
GM2 ganglioside activator
chr2_+_188292814 0.04 ENST00000409580.5
ENST00000409637.7
GULP1
GULP PTB domain containing engulfment adaptor 1
chr16_+_16232516 0.04 ENST00000399336.9
ENST00000678538.1
ENST00000678192.1
ENST00000677777.1
ENST00000677260.1
ENST00000676550.1
ENST00000263012.10
NOMO3
NODAL modulator 3
chr22_+_49918733 0.04 ENST00000407217.7
ENST00000403427.3
CRELD2
cysteine rich with EGF like domains 2
chr11_+_66257265 0.04 ENST00000531240.5
ENST00000417856.5
KLC2
kinesin light chain 2

Network of associatons between targets according to the STRING database.

First level regulatory network of RARA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:2000412 positive regulation of tumor necrosis factor (ligand) superfamily member 11 production(GO:2000309) positive regulation of thymocyte migration(GO:2000412)
0.1 0.3 GO:0001794 type IIa hypersensitivity(GO:0001794) regulation of type IIa hypersensitivity(GO:0001796) type II hypersensitivity(GO:0002445) regulation of type II hypersensitivity(GO:0002892)
0.1 0.9 GO:0061709 reticulophagy(GO:0061709)
0.1 0.2 GO:1990764 regulation of myofibroblast contraction(GO:1904328) myofibroblast contraction(GO:1990764)
0.1 0.2 GO:0043973 histone H3-K4 acetylation(GO:0043973)
0.1 0.2 GO:0060738 epithelial-mesenchymal signaling involved in prostate gland development(GO:0060738)
0.0 0.6 GO:1902414 protein localization to cell junction(GO:1902414)
0.0 0.1 GO:0002086 diaphragm contraction(GO:0002086)
0.0 0.1 GO:0060775 mediolateral intercalation(GO:0060031) planar cell polarity pathway involved in gastrula mediolateral intercalation(GO:0060775)
0.0 0.2 GO:0010760 negative regulation of macrophage chemotaxis(GO:0010760)
0.0 0.6 GO:0038203 TORC2 signaling(GO:0038203)
0.0 0.1 GO:1903937 response to acrylamide(GO:1903937)
0.0 0.1 GO:0021722 superior olivary nucleus development(GO:0021718) superior olivary nucleus maturation(GO:0021722)
0.0 0.1 GO:0002541 activation of plasma proteins involved in acute inflammatory response(GO:0002541)
0.0 0.2 GO:0060356 leucine import(GO:0060356)
0.0 0.1 GO:0018352 protein-pyridoxal-5-phosphate linkage(GO:0018352)
0.0 0.4 GO:0031642 negative regulation of myelination(GO:0031642)
0.0 0.2 GO:0015820 leucine transport(GO:0015820)
0.0 0.1 GO:0030311 poly-N-acetyllactosamine biosynthetic process(GO:0030311)
0.0 0.1 GO:0098838 reduced folate transmembrane transport(GO:0098838)
0.0 0.1 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.1 GO:0045607 regulation of auditory receptor cell differentiation(GO:0045607) regulation of mechanoreceptor differentiation(GO:0045631) regulation of inner ear receptor cell differentiation(GO:2000980)
0.0 0.1 GO:1905073 proepicardium development(GO:0003342) septum transversum development(GO:0003343) occluding junction disassembly(GO:1905071) regulation of occluding junction disassembly(GO:1905073) positive regulation of occluding junction disassembly(GO:1905075)
0.0 0.1 GO:0071105 response to interleukin-11(GO:0071105)
0.0 0.1 GO:2000325 regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000325) positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327)
0.0 0.3 GO:0036148 phosphatidylglycerol acyl-chain remodeling(GO:0036148)
0.0 0.0 GO:0046271 phenylpropanoid catabolic process(GO:0046271)
0.0 0.2 GO:0006670 sphingosine metabolic process(GO:0006670)
0.0 0.0 GO:1903719 regulation of I-kappaB phosphorylation(GO:1903719) positive regulation of I-kappaB phosphorylation(GO:1903721)
0.0 0.4 GO:0031581 hemidesmosome assembly(GO:0031581)
0.0 0.1 GO:1903826 arginine transmembrane transport(GO:1903826)
0.0 0.0 GO:0006781 succinyl-CoA pathway(GO:0006781)
0.0 0.1 GO:0030581 intracellular transport of viral protein in host cell(GO:0019060) symbiont intracellular protein transport in host(GO:0030581) intracellular protein transport in other organism involved in symbiotic interaction(GO:0051708)
0.0 0.0 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414) tRNA 3'-trailer cleavage(GO:0042779) mitochondrial tRNA 3'-end processing(GO:1990180)
0.0 0.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.1 GO:1902231 positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902231)
0.0 0.0 GO:0031247 actin rod assembly(GO:0031247)
0.0 0.2 GO:0033169 histone H3-K9 demethylation(GO:0033169)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0071065 dense core granule membrane(GO:0032127) alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex(GO:0071065)
0.1 0.4 GO:0005610 laminin-5 complex(GO:0005610)
0.0 0.1 GO:0016938 kinesin I complex(GO:0016938)
0.0 0.1 GO:0097057 TRAF2-GSTP1 complex(GO:0097057)
0.0 0.1 GO:0000120 RNA polymerase I transcription factor complex(GO:0000120)
0.0 0.1 GO:0030936 collagen type XIII trimer(GO:0005600) transmembrane collagen trimer(GO:0030936)
0.0 0.6 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.2 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.0 0.1 GO:0016533 cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)
0.0 0.1 GO:0034991 nuclear meiotic cohesin complex(GO:0034991)
0.0 0.1 GO:0036502 Derlin-1-VIMP complex(GO:0036502)
0.0 0.2 GO:0097427 microtubule bundle(GO:0097427)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.9 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.1 GO:0070022 transforming growth factor beta receptor homodimeric complex(GO:0070022)
0.0 0.0 GO:0031085 BLOC-3 complex(GO:0031085)
0.0 0.0 GO:0005889 hydrogen:potassium-exchanging ATPase complex(GO:0005889)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0047192 1-alkylglycerophosphocholine O-acetyltransferase activity(GO:0047192)
0.0 0.4 GO:0004630 phospholipase D activity(GO:0004630)
0.0 0.2 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.0 0.1 GO:0005174 CD40 receptor binding(GO:0005174)
0.0 0.1 GO:0016534 cyclin-dependent protein kinase 5 activator activity(GO:0016534)
0.0 0.1 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.0 0.1 GO:0032450 maltose alpha-glucosidase activity(GO:0032450)
0.0 0.1 GO:0004531 deoxyribonuclease II activity(GO:0004531)
0.0 0.1 GO:0016936 galactoside binding(GO:0016936)
0.0 0.2 GO:0005298 proline:sodium symporter activity(GO:0005298)
0.0 0.1 GO:0022865 transmembrane electron transfer carrier(GO:0022865)
0.0 0.5 GO:0008510 sodium:bicarbonate symporter activity(GO:0008510)
0.0 0.2 GO:0086083 cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083)
0.0 0.3 GO:0008517 folic acid transporter activity(GO:0008517)
0.0 0.5 GO:0031435 mitogen-activated protein kinase kinase kinase binding(GO:0031435)
0.0 0.1 GO:0008532 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532)
0.0 0.1 GO:0015319 sodium:inorganic phosphate symporter activity(GO:0015319)
0.0 0.1 GO:0052816 medium-chain acyl-CoA hydrolase activity(GO:0052815) long-chain acyl-CoA hydrolase activity(GO:0052816)
0.0 0.1 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.0 GO:0047389 glycerophosphocholine phosphodiesterase activity(GO:0047389)
0.0 0.2 GO:0030274 LIM domain binding(GO:0030274)
0.0 0.1 GO:0001595 angiotensin receptor activity(GO:0001595) angiotensin type II receptor activity(GO:0004945)
0.0 0.1 GO:0030348 syntaxin-3 binding(GO:0030348)
0.0 0.1 GO:0008853 exodeoxyribonuclease III activity(GO:0008853)
0.0 0.0 GO:0032428 sphingolipid activator protein activity(GO:0030290) beta-N-acetylgalactosaminidase activity(GO:0032428)
0.0 0.2 GO:0031014 troponin T binding(GO:0031014)
0.0 0.0 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.2 GO:0031404 chloride ion binding(GO:0031404)
0.0 0.0 GO:0052798 beta-galactoside alpha-2,3-sialyltransferase activity(GO:0052798)
0.0 0.2 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.0 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.0 0.0 GO:0002060 purine nucleobase binding(GO:0002060)
0.0 0.0 GO:0030350 iron-responsive element binding(GO:0030350)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions
0.0 0.7 PID INTEGRIN A9B1 PATHWAY Alpha9 beta1 integrin signaling events
0.0 0.3 PID ERB GENOMIC PATHWAY Validated nuclear estrogen receptor beta network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME ACYL CHAIN REMODELLING OF PS Genes involved in Acyl chain remodelling of PS
0.0 0.3 REACTOME INITIAL TRIGGERING OF COMPLEMENT Genes involved in Initial triggering of complement