Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MTA3 | hg38_v1_chr2_+_42494547_42494583 | -0.81 | 1.4e-02 | Click! |
RCOR1 | hg38_v1_chr14_+_102592611_102592668 | 0.52 | 1.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_47369301 Show fit | 6.84 |
ENST00000263735.9
|
epithelial cell adhesion molecule |
|
chr19_-_51001138 Show fit | 6.42 |
ENST00000593490.1
|
kallikrein related peptidase 8 |
|
chr19_-_51001591 Show fit | 5.28 |
ENST00000391806.6
|
kallikrein related peptidase 8 |
|
chr19_-_50983815 Show fit | 5.22 |
ENST00000391807.5
ENST00000593904.1 ENST00000595820.6 |
kallikrein related peptidase 7 |
|
chr19_-_50953093 Show fit | 5.08 |
ENST00000593428.5
|
kallikrein related peptidase 5 |
|
chr2_-_46462 Show fit | 4.88 |
ENST00000327669.5
|
family with sequence similarity 110 member C |
|
chr1_+_43935807 Show fit | 4.67 |
ENST00000438616.3
|
artemin |
|
chr7_+_121873317 Show fit | 4.62 |
ENST00000651863.1
ENST00000652298.1 ENST00000449182.1 |
protein tyrosine phosphatase receptor type Z1 |
|
chr16_+_68645290 Show fit | 4.57 |
ENST00000264012.9
|
cadherin 3 |
|
chr13_-_20232303 Show fit | 4.57 |
ENST00000400065.7
ENST00000643121.1 ENST00000647029.1 ENST00000643211.1 ENST00000400066.8 ENST00000644283.1 |
gap junction protein beta 6 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 31.8 | GO:0070268 | cornification(GO:0070268) |
0.9 | 24.7 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
3.6 | 21.7 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
1.4 | 19.7 | GO:0031642 | negative regulation of myelination(GO:0031642) |
1.3 | 16.9 | GO:0038129 | ERBB3 signaling pathway(GO:0038129) |
0.5 | 16.6 | GO:0035590 | purinergic nucleotide receptor signaling pathway(GO:0035590) |
0.3 | 15.8 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.9 | 15.1 | GO:0070444 | oligodendrocyte progenitor proliferation(GO:0070444) regulation of oligodendrocyte progenitor proliferation(GO:0070445) |
2.2 | 13.2 | GO:1904274 | tricellular tight junction assembly(GO:1904274) |
1.0 | 12.0 | GO:0015820 | leucine transport(GO:0015820) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 331.1 | GO:0016021 | integral component of membrane(GO:0016021) |
0.1 | 107.1 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.1 | 40.1 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.2 | 30.4 | GO:0031227 | intrinsic component of endoplasmic reticulum membrane(GO:0031227) |
0.2 | 29.5 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.1 | 25.3 | GO:0043296 | apical junction complex(GO:0043296) |
0.7 | 23.9 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.3 | 23.9 | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116) |
0.9 | 22.9 | GO:0005922 | connexon complex(GO:0005922) |
3.2 | 22.5 | GO:0097209 | epidermal lamellar body(GO:0097209) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 85.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.6 | 20.8 | GO:0005001 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.9 | 16.8 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.2 | 16.8 | GO:0001618 | virus receptor activity(GO:0001618) |
0.5 | 16.6 | GO:0098641 | cadherin binding involved in cell-cell adhesion(GO:0098641) |
1.2 | 16.3 | GO:0031014 | troponin T binding(GO:0031014) |
0.2 | 15.3 | GO:0019894 | kinesin binding(GO:0019894) |
0.1 | 14.4 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 14.3 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.2 | 13.7 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 33.8 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.1 | 23.0 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.7 | 13.5 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.5 | 12.7 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.1 | 12.6 | PID NOTCH PATHWAY | Notch signaling pathway |
0.3 | 12.4 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.1 | 10.6 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.2 | 10.1 | PID RAS PATHWAY | Regulation of Ras family activation |
0.1 | 9.7 | ST T CELL SIGNAL TRANSDUCTION | T Cell Signal Transduction |
0.2 | 8.4 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 24.7 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.3 | 23.5 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.2 | 23.1 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.9 | 22.2 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.3 | 18.2 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.3 | 17.7 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.5 | 16.7 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.4 | 16.0 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.2 | 15.5 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.6 | 14.9 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |