Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RFX2 | hg38_v1_chr19_-_6110463_6110541 | -0.33 | 4.3e-01 | Click! |
RFX3 | hg38_v1_chr9_-_3525968_3526017 | 0.26 | 5.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_5500997 Show fit | 1.94 |
ENST00000568641.2
|
novel protein |
|
chr14_+_105474781 Show fit | 1.87 |
ENST00000550577.5
ENST00000538259.2 ENST00000329146.9 |
cysteine rich protein 2 |
|
chr14_-_59870752 Show fit | 1.78 |
ENST00000611068.1
ENST00000267484.10 |
reticulon 1 |
|
chr5_+_93583212 Show fit | 1.65 |
ENST00000327111.8
|
nuclear receptor subfamily 2 group F member 1 |
|
chr1_+_183636065 Show fit | 1.65 |
ENST00000304685.8
|
ral guanine nucleotide dissociation stimulator like 1 |
|
chr5_-_180353317 Show fit | 1.31 |
ENST00000253778.13
|
glutamine-fructose-6-phosphate transaminase 2 |
|
chr11_+_134069060 Show fit | 1.27 |
ENST00000534549.5
ENST00000441717.3 ENST00000299106.9 |
junctional adhesion molecule 3 |
|
chr8_+_119416427 Show fit | 1.22 |
ENST00000259526.4
|
cellular communication network factor 3 |
|
chr15_+_43510945 Show fit | 1.07 |
ENST00000382031.5
|
microtubule associated protein 1A |
|
chr22_-_43089375 Show fit | 1.06 |
ENST00000266254.12
|
tubulin tyrosine ligase like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.9 | GO:0010734 | protein glutathionylation(GO:0010731) regulation of protein glutathionylation(GO:0010732) negative regulation of protein glutathionylation(GO:0010734) |
0.1 | 2.8 | GO:2000480 | negative regulation of cAMP-dependent protein kinase activity(GO:2000480) |
0.1 | 2.6 | GO:0044458 | motile cilium assembly(GO:0044458) |
0.3 | 2.4 | GO:0002318 | myeloid progenitor cell differentiation(GO:0002318) |
0.0 | 2.3 | GO:0043268 | positive regulation of potassium ion transport(GO:0043268) |
0.1 | 1.9 | GO:0007288 | sperm axoneme assembly(GO:0007288) |
0.1 | 1.5 | GO:0050884 | neuromuscular process controlling posture(GO:0050884) |
0.0 | 1.5 | GO:0097120 | receptor localization to synapse(GO:0097120) |
0.1 | 1.3 | GO:0006048 | UDP-N-acetylglucosamine biosynthetic process(GO:0006048) |
0.0 | 1.3 | GO:0007405 | neuroblast proliferation(GO:0007405) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) |
0.1 | 2.0 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.0 | 1.8 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 1.6 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
0.1 | 1.5 | GO:0005664 | origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664) |
0.5 | 1.4 | GO:0097224 | sperm connecting piece(GO:0097224) |
0.1 | 1.3 | GO:0033010 | paranodal junction(GO:0033010) |
0.1 | 1.3 | GO:0035102 | PRC1 complex(GO:0035102) |
0.3 | 1.2 | GO:0032144 | 4-aminobutyrate transaminase complex(GO:0032144) |
0.0 | 1.2 | GO:0043034 | costamere(GO:0043034) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.2 | GO:0044325 | ion channel binding(GO:0044325) |
0.0 | 3.1 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.1 | 2.8 | GO:0004862 | cAMP-dependent protein kinase inhibitor activity(GO:0004862) |
0.3 | 1.7 | GO:0008321 | Ral guanyl-nucleotide exchange factor activity(GO:0008321) |
0.2 | 1.7 | GO:0044323 | retinoic acid-responsive element binding(GO:0044323) |
0.1 | 1.4 | GO:0032027 | myosin light chain binding(GO:0032027) |
0.3 | 1.3 | GO:0004360 | glutamine-fructose-6-phosphate transaminase (isomerizing) activity(GO:0004360) |
0.0 | 1.3 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.3 | 1.2 | GO:0003867 | 4-aminobutyrate transaminase activity(GO:0003867) succinate-semialdehyde dehydrogenase binding(GO:0032145) (S)-3-amino-2-methylpropionate transaminase activity(GO:0047298) |
0.2 | 1.1 | GO:0008853 | exodeoxyribonuclease III activity(GO:0008853) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 1.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.8 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 0.8 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 0.8 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 0.7 | PID ARF 3PATHWAY | Arf1 pathway |
0.0 | 0.7 | PID IGF1 PATHWAY | IGF1 pathway |
0.0 | 0.7 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 0.6 | PID ATM PATHWAY | ATM pathway |
0.0 | 0.5 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | REACTOME GLUCAGON SIGNALING IN METABOLIC REGULATION | Genes involved in Glucagon signaling in metabolic regulation |
0.0 | 1.4 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 1.2 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |
0.0 | 1.2 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.0 | 1.0 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.0 | 0.8 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.0 | 0.8 | REACTOME SPRY REGULATION OF FGF SIGNALING | Genes involved in Spry regulation of FGF signaling |
0.0 | 0.7 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.0 | 0.7 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.0 | 0.7 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |