Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RREB1 | hg38_v1_chr6_+_7107941_7108031 | 0.65 | 8.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_35118456 Show fit | 0.79 |
ENST00000604621.5
|
FXYD domain containing ion transport regulator 3 |
|
chr20_+_59604527 Show fit | 0.78 |
ENST00000371015.6
|
phosphatase and actin regulator 3 |
|
chr19_-_50953063 Show fit | 0.77 |
ENST00000391809.6
|
kallikrein related peptidase 5 |
|
chr19_-_50953093 Show fit | 0.77 |
ENST00000593428.5
|
kallikrein related peptidase 5 |
|
chr19_-_50952942 Show fit | 0.73 |
ENST00000594846.1
ENST00000336334.8 |
kallikrein related peptidase 5 |
|
chr16_+_68737284 Show fit | 0.61 |
ENST00000261769.10
ENST00000422392.6 |
cadherin 1 |
|
chr6_-_136526472 Show fit | 0.59 |
ENST00000454590.5
ENST00000432797.6 |
microtubule associated protein 7 |
|
chr19_-_6720641 Show fit | 0.59 |
ENST00000245907.11
|
complement C3 |
|
chr6_-_136526654 Show fit | 0.55 |
ENST00000611373.1
|
microtubule associated protein 7 |
|
chr17_-_41521719 Show fit | 0.54 |
ENST00000393976.6
|
keratin 15 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.3 | GO:0002225 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.1 | 1.2 | GO:0038129 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
0.1 | 0.8 | GO:0071681 | response to indole-3-methanol(GO:0071680) cellular response to indole-3-methanol(GO:0071681) |
0.0 | 0.7 | GO:0007258 | JUN phosphorylation(GO:0007258) |
0.2 | 0.6 | GO:0002892 | type IIa hypersensitivity(GO:0001794) regulation of type IIa hypersensitivity(GO:0001796) type II hypersensitivity(GO:0002445) regulation of type II hypersensitivity(GO:0002892) |
0.1 | 0.4 | GO:0045204 | MAPK export from nucleus(GO:0045204) |
0.0 | 0.4 | GO:0009912 | auditory receptor cell fate commitment(GO:0009912) gamma-delta T cell differentiation(GO:0042492) inner ear receptor cell fate commitment(GO:0060120) |
0.0 | 0.4 | GO:0030488 | tRNA methylation(GO:0030488) |
0.1 | 0.3 | GO:0070902 | mitochondrial tRNA pseudouridine synthesis(GO:0070902) |
0.0 | 0.3 | GO:0036493 | positive regulation of translation in response to endoplasmic reticulum stress(GO:0036493) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.3 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.0 | 1.2 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 0.8 | GO:0016600 | flotillin complex(GO:0016600) |
0.0 | 0.5 | GO:0030314 | junctional membrane complex(GO:0030314) |
0.1 | 0.4 | GO:0070701 | mucus layer(GO:0070701) |
0.0 | 0.4 | GO:0016010 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.0 | 0.3 | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178) |
0.1 | 0.2 | GO:1990622 | CHOP-ATF3 complex(GO:1990622) |
0.0 | 0.1 | GO:0031523 | Myb complex(GO:0031523) |
0.0 | 0.1 | GO:0070436 | Grb2-EGFR complex(GO:0070436) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 0.8 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.1 | 0.7 | GO:0016909 | JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909) |
0.0 | 0.7 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.0 | 0.6 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) |
0.0 | 0.6 | GO:0045295 | gamma-catenin binding(GO:0045295) |
0.1 | 0.4 | GO:0009019 | tRNA (guanine-N1-)-methyltransferase activity(GO:0009019) |
0.0 | 0.4 | GO:0005112 | Notch binding(GO:0005112) |
0.1 | 0.3 | GO:0004730 | pseudouridylate synthase activity(GO:0004730) |
0.1 | 0.3 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.0 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 0.8 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
0.0 | 0.6 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 0.5 | ST INTERLEUKIN 4 PATHWAY | Interleukin 4 (IL-4) Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 0.8 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 0.8 | REACTOME JNK C JUN KINASES PHOSPHORYLATION AND ACTIVATION MEDIATED BY ACTIVATED HUMAN TAK1 | Genes involved in JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 |
0.0 | 0.6 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |
0.0 | 0.4 | REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR | Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor |
0.0 | 0.3 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |