Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RXRG | hg38_v1_chr1_-_165445220_165445355, hg38_v1_chr1_-_165445088_165445140 | 0.42 | 3.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_+_48997377 Show fit | 1.79 |
ENST00000290341.8
|
insulin like growth factor 2 mRNA binding protein 1 |
|
chr15_+_32718476 Show fit | 1.63 |
ENST00000652365.1
|
gremlin 1, DAN family BMP antagonist |
|
chr5_-_173328407 Show fit | 1.16 |
ENST00000265087.9
|
stanniocalcin 2 |
|
chr2_+_109129199 Show fit | 1.01 |
ENST00000309415.8
|
SH3 domain containing ring finger 3 |
|
chr5_+_93584916 Show fit | 1.01 |
ENST00000647447.1
ENST00000615873.1 |
nuclear receptor subfamily 2 group F member 1 |
|
chr15_+_32717994 Show fit | 0.85 |
ENST00000560677.5
ENST00000560830.1 ENST00000651154.1 |
gremlin 1, DAN family BMP antagonist |
|
chrX_+_30653359 Show fit | 0.83 |
ENST00000378943.7
ENST00000378946.7 ENST00000427190.6 |
glycerol kinase |
|
chrX_+_30653478 Show fit | 0.78 |
ENST00000378945.7
ENST00000378941.4 |
glycerol kinase |
|
chr1_-_212699817 Show fit | 0.69 |
ENST00000243440.2
|
basic leucine zipper ATF-like transcription factor 3 |
|
chr1_+_210232776 Show fit | 0.68 |
ENST00000367012.4
|
SERTA domain containing 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 2.5 | GO:1900154 | regulation of bone trabecula formation(GO:1900154) negative regulation of bone trabecula formation(GO:1900155) |
0.2 | 2.4 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.1 | 1.9 | GO:0070934 | CRD-mediated mRNA stabilization(GO:0070934) |
0.3 | 1.6 | GO:0046167 | glycerol-3-phosphate biosynthetic process(GO:0046167) |
0.0 | 1.3 | GO:0071470 | cellular response to osmotic stress(GO:0071470) |
0.1 | 1.2 | GO:2001256 | regulation of store-operated calcium entry(GO:2001256) |
0.0 | 0.8 | GO:0010991 | negative regulation of SMAD protein complex assembly(GO:0010991) |
0.1 | 0.7 | GO:0010734 | protein glutathionylation(GO:0010731) regulation of protein glutathionylation(GO:0010732) negative regulation of protein glutathionylation(GO:0010734) |
0.1 | 0.7 | GO:0060988 | lipid tube assembly(GO:0060988) |
0.1 | 0.7 | GO:1902897 | regulation of postsynaptic density protein 95 clustering(GO:1902897) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | GO:0005901 | caveola(GO:0005901) |
0.1 | 1.9 | GO:0070937 | CRD-mediated mRNA stability complex(GO:0070937) |
0.0 | 1.4 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.2 | 0.7 | GO:0060987 | lipid tube(GO:0060987) |
0.0 | 0.7 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) |
0.0 | 0.7 | GO:0005916 | fascia adherens(GO:0005916) |
0.0 | 0.6 | GO:0070775 | H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776) |
0.0 | 0.6 | GO:0097440 | apical dendrite(GO:0097440) |
0.0 | 0.6 | GO:0097431 | mitotic spindle pole(GO:0097431) |
0.0 | 0.6 | GO:0071565 | nBAF complex(GO:0071565) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.4 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.2 | 2.3 | GO:0016015 | morphogen activity(GO:0016015) |
0.0 | 1.9 | GO:0005179 | hormone activity(GO:0005179) |
0.0 | 1.8 | GO:0048027 | mRNA 5'-UTR binding(GO:0048027) |
0.0 | 1.7 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.3 | 1.6 | GO:0004370 | glycerol kinase activity(GO:0004370) |
0.1 | 1.0 | GO:0044323 | retinoic acid-responsive element binding(GO:0044323) |
0.0 | 1.0 | GO:0050699 | WW domain binding(GO:0050699) |
0.0 | 0.7 | GO:0045294 | alpha-catenin binding(GO:0045294) |
0.0 | 0.7 | GO:0042169 | SH2 domain binding(GO:0042169) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 1.4 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 0.9 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.9 | SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES | Genes related to the insulin receptor pathway |
0.0 | 0.5 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.0 | 0.5 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 0.3 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 0.3 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 0.3 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 0.2 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | REACTOME TRIGLYCERIDE BIOSYNTHESIS | Genes involved in Triglyceride Biosynthesis |
0.1 | 1.3 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.0 | 0.8 | REACTOME SEMA4D IN SEMAPHORIN SIGNALING | Genes involved in Sema4D in semaphorin signaling |
0.0 | 0.7 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 0.7 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.6 | REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN | Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein |
0.0 | 0.5 | REACTOME ROLE OF SECOND MESSENGERS IN NETRIN1 SIGNALING | Genes involved in Role of second messengers in netrin-1 signaling |
0.0 | 0.4 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.3 | REACTOME REGULATED PROTEOLYSIS OF P75NTR | Genes involved in Regulated proteolysis of p75NTR |
0.0 | 0.3 | REACTOME ACYL CHAIN REMODELLING OF PG | Genes involved in Acyl chain remodelling of PG |