Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SOX2 | hg38_v1_chr3_+_181711915_181711934 | 0.82 | 1.3e-02 | Click! |
SOX3 | hg38_v1_chrX_-_140505058_140505076 | -0.68 | 6.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_137532452 Show fit | 1.43 |
ENST00000412923.6
ENST00000511115.5 ENST00000344876.9 ENST00000507846.5 ENST00000510305.5 ENST00000611581.1 |
protocadherin 18 |
|
chr4_-_2262082 Show fit | 1.16 |
ENST00000337190.7
|
MAX dimerization protein 4 |
|
chr18_+_6729698 Show fit | 1.14 |
ENST00000383472.9
|
Rho GTPase activating protein 28 |
|
chr3_-_18424533 Show fit | 1.11 |
ENST00000417717.6
|
SATB homeobox 1 |
|
chr9_+_87498491 Show fit | 0.82 |
ENST00000622514.4
|
death associated protein kinase 1 |
|
chr14_-_59630582 Show fit | 0.79 |
ENST00000395090.5
|
reticulon 1 |
|
chr8_+_103372388 Show fit | 0.79 |
ENST00000520337.1
|
collagen triple helix repeat containing 1 |
|
chr1_+_215082731 Show fit | 0.79 |
ENST00000444842.7
|
potassium two pore domain channel subfamily K member 2 |
|
chr2_+_209579399 Show fit | 0.72 |
ENST00000360351.8
|
microtubule associated protein 2 |
|
chr14_+_96039328 Show fit | 0.71 |
ENST00000553764.1
ENST00000555004.3 ENST00000556728.1 ENST00000553782.1 |
chromosome 14 open reading frame 132 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.2 | 1.4 | GO:1902897 | regulation of postsynaptic density protein 95 clustering(GO:1902897) |
0.1 | 1.4 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.2 | 1.3 | GO:1901189 | positive regulation of ephrin receptor signaling pathway(GO:1901189) positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment(GO:1901297) positive regulation of canonical Wnt signaling pathway involved in heart development(GO:1905068) |
0.1 | 1.3 | GO:1904424 | regulation of GTP binding(GO:1904424) |
0.4 | 1.2 | GO:1903465 | vacuolar phosphate transport(GO:0007037) positive regulation of mitotic cell cycle DNA replication(GO:1903465) positive regulation of parathyroid hormone secretion(GO:2000830) |
0.0 | 1.1 | GO:0032728 | positive regulation of interferon-beta production(GO:0032728) |
0.1 | 1.0 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 1.0 | GO:0097151 | positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828) |
0.0 | 1.0 | GO:0071447 | cellular response to hydroperoxide(GO:0071447) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.6 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.0 | 1.6 | GO:0016605 | PML body(GO:0016605) |
0.1 | 1.3 | GO:0098651 | basement membrane collagen trimer(GO:0098651) |
0.1 | 1.3 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.1 | 1.2 | GO:0002193 | MAML1-RBP-Jkappa- ICN1 complex(GO:0002193) |
0.1 | 1.1 | GO:0071953 | elastic fiber(GO:0071953) |
0.0 | 1.1 | GO:0005916 | fascia adherens(GO:0005916) |
0.0 | 1.1 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 1.0 | GO:0005720 | nuclear heterochromatin(GO:0005720) |
0.1 | 0.8 | GO:0044305 | calyx of Held(GO:0044305) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.1 | 2.0 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.1 | 1.7 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.1 | 1.5 | GO:0045295 | gamma-catenin binding(GO:0045295) |
0.1 | 1.4 | GO:0000150 | recombinase activity(GO:0000150) |
0.1 | 1.1 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
0.0 | 1.1 | GO:0031005 | filamin binding(GO:0031005) |
0.0 | 1.1 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.0 | 1.1 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.0 | 1.1 | GO:0017147 | Wnt-protein binding(GO:0017147) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.9 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.5 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 1.2 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
0.0 | 1.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 1.0 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 0.9 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.9 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 0.8 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.0 | 0.8 | PID IFNG PATHWAY | IFN-gamma pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1 | Genes involved in Signaling by activated point mutants of FGFR1 |
0.1 | 1.2 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.1 | 1.1 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 1.1 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.1 | 1.0 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 1.0 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 1.0 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 0.9 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.0 | 0.9 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.0 | 0.8 | REACTOME GAP JUNCTION DEGRADATION | Genes involved in Gap junction degradation |