Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SPI1 | hg38_v1_chr11_-_47378494_47378526 | 0.68 | 6.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_233060295 Show fit | 1.74 |
ENST00000445964.6
|
inositol polyphosphate-5-phosphatase D |
|
chr2_+_233059838 Show fit | 1.60 |
ENST00000359570.9
|
inositol polyphosphate-5-phosphatase D |
|
chr8_+_123182635 Show fit | 1.24 |
ENST00000276699.10
ENST00000522648.5 |
family with sequence similarity 83 member A |
|
chr2_-_160200289 Show fit | 1.06 |
ENST00000409872.1
|
integrin subunit beta 6 |
|
chr2_-_160200251 Show fit | 1.04 |
ENST00000428609.6
ENST00000409967.6 ENST00000283249.7 |
integrin subunit beta 6 |
|
chr10_-_96271508 Show fit | 1.03 |
ENST00000427367.6
ENST00000413476.6 ENST00000371176.6 |
B cell linker |
|
chr2_-_160200310 Show fit | 0.99 |
ENST00000620391.4
|
integrin subunit beta 6 |
|
chr1_-_201399525 Show fit | 0.91 |
ENST00000367313.4
|
ladinin 1 |
|
chr10_-_96271553 Show fit | 0.86 |
ENST00000224337.10
|
B cell linker |
|
chr11_+_67056805 Show fit | 0.80 |
ENST00000308831.7
|
ras homolog family member D |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 3.3 | GO:0045658 | regulation of neutrophil differentiation(GO:0045658) negative regulation of neutrophil differentiation(GO:0045659) |
0.3 | 2.8 | GO:0038044 | transforming growth factor-beta secretion(GO:0038044) |
0.0 | 2.0 | GO:0045730 | respiratory burst(GO:0045730) |
0.0 | 1.8 | GO:2000249 | regulation of actin cytoskeleton reorganization(GO:2000249) |
0.1 | 1.2 | GO:0048298 | positive regulation of isotype switching to IgA isotypes(GO:0048298) |
0.3 | 1.1 | GO:0030037 | actin filament reorganization involved in cell cycle(GO:0030037) |
0.1 | 1.0 | GO:0003322 | pancreatic A cell development(GO:0003322) |
0.2 | 0.9 | GO:1904274 | tricellular tight junction assembly(GO:1904274) |
0.0 | 0.9 | GO:0035855 | megakaryocyte development(GO:0035855) |
0.2 | 0.8 | GO:0045399 | positive regulation of interleukin-3 production(GO:0032752) interleukin-3 biosynthetic process(GO:0042223) regulation of interleukin-3 biosynthetic process(GO:0045399) positive regulation of interleukin-3 biosynthetic process(GO:0045401) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 2.8 | GO:0034685 | integrin alphav-beta6 complex(GO:0034685) |
0.2 | 1.9 | GO:0032010 | phagolysosome(GO:0032010) |
0.0 | 1.6 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 1.1 | GO:0002102 | podosome(GO:0002102) |
0.1 | 0.9 | GO:0061689 | tricellular tight junction(GO:0061689) |
0.0 | 0.8 | GO:0000815 | ESCRT III complex(GO:0000815) |
0.0 | 0.8 | GO:0097025 | MPP7-DLG1-LIN7 complex(GO:0097025) |
0.1 | 0.7 | GO:0019815 | B cell receptor complex(GO:0019815) |
0.0 | 0.6 | GO:0030673 | axolemma(GO:0030673) |
0.1 | 0.5 | GO:0070557 | PCNA-p21 complex(GO:0070557) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 3.3 | GO:0016314 | phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314) |
0.0 | 2.5 | GO:0001618 | virus receptor activity(GO:0001618) |
0.2 | 1.9 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
0.1 | 1.5 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.1 | 1.3 | GO:0031702 | type 1 angiotensin receptor binding(GO:0031702) |
0.1 | 1.2 | GO:0036312 | phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312) |
0.0 | 1.2 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.0 | 1.2 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.0 | 1.0 | GO:0035035 | histone acetyltransferase binding(GO:0035035) |
0.1 | 0.9 | GO:0035325 | Toll-like receptor binding(GO:0035325) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | ST INTERLEUKIN 4 PATHWAY | Interleukin 4 (IL-4) Pathway |
0.1 | 3.1 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.1 | 2.6 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 2.3 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 2.1 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 1.5 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 1.3 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 1.0 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
0.0 | 0.8 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 0.7 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.2 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.0 | 3.0 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 1.9 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.0 | 1.5 | REACTOME REGULATION OF MRNA STABILITY BY PROTEINS THAT BIND AU RICH ELEMENTS | Genes involved in Regulation of mRNA Stability by Proteins that Bind AU-rich Elements |
0.0 | 1.2 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.0 | 1.2 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.0 | 1.0 | REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL | Genes involved in AKT phosphorylates targets in the cytosol |
0.0 | 1.0 | REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP | Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) |
0.0 | 1.0 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.1 | 0.9 | REACTOME REGULATION OF KIT SIGNALING | Genes involved in Regulation of KIT signaling |