Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SPIC | hg38_v1_chr12_+_101475319_101475340 | 0.16 | 7.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_+_68644988 Show fit | 2.93 |
ENST00000429102.6
|
cadherin 3 |
|
chr19_-_50952942 Show fit | 2.24 |
ENST00000594846.1
ENST00000336334.8 |
kallikrein related peptidase 5 |
|
chr18_+_23949847 Show fit | 2.03 |
ENST00000588004.1
|
laminin subunit alpha 3 |
|
chr2_-_112836702 Show fit | 1.86 |
ENST00000416750.1
ENST00000263341.7 ENST00000418817.5 |
interleukin 1 beta |
|
chr7_-_143408848 Show fit | 1.76 |
ENST00000275815.4
|
EPH receptor A1 |
|
chr15_+_40844018 Show fit | 1.63 |
ENST00000344051.8
ENST00000562057.6 |
serine peptidase inhibitor, Kunitz type 1 |
|
chr10_-_97401277 Show fit | 1.61 |
ENST00000315563.10
ENST00000370992.9 ENST00000414986.5 |
ribosomal RNA processing 12 homolog |
|
chr19_-_50953063 Show fit | 1.53 |
ENST00000391809.6
|
kallikrein related peptidase 5 |
|
chr3_-_111595339 Show fit | 1.52 |
ENST00000317012.5
|
zinc finger BED-type containing 2 |
|
chr19_-_50953093 Show fit | 1.51 |
ENST00000593428.5
|
kallikrein related peptidase 5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 5.3 | GO:0002225 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.7 | 4.1 | GO:0032468 | Golgi calcium ion homeostasis(GO:0032468) |
0.1 | 3.6 | GO:0045730 | respiratory burst(GO:0045730) |
1.0 | 2.9 | GO:0032912 | negative regulation of transforming growth factor beta2 production(GO:0032912) negative regulation of hair follicle maturation(GO:0048817) regulation of melanosome transport(GO:1902908) |
0.0 | 2.4 | GO:1901998 | toxin transport(GO:1901998) |
0.0 | 2.3 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.1 | 2.0 | GO:0051639 | actin filament network formation(GO:0051639) |
0.1 | 2.0 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.6 | 1.9 | GO:0046136 | positive regulation of vitamin metabolic process(GO:0046136) positive regulation of vitamin D biosynthetic process(GO:0060557) positive regulation of calcidiol 1-monooxygenase activity(GO:0060559) |
0.0 | 1.9 | GO:0016266 | O-glycan processing(GO:0016266) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 5.3 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.4 | 3.7 | GO:0032010 | phagolysosome(GO:0032010) |
0.0 | 3.7 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.0 | 3.7 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.0 | 3.6 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 2.3 | GO:0005861 | troponin complex(GO:0005861) |
0.1 | 2.3 | GO:0001891 | phagocytic cup(GO:0001891) |
0.3 | 2.0 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.0 | 2.0 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.3 | 1.6 | GO:0036502 | Derlin-1-VIMP complex(GO:0036502) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 3.9 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
0.3 | 3.7 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
0.2 | 2.3 | GO:0031014 | troponin T binding(GO:0031014) |
0.1 | 2.3 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.0 | 2.2 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.0 | 2.1 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.1 | 1.9 | GO:1990381 | ubiquitin-specific protease binding(GO:1990381) |
0.2 | 1.8 | GO:0005005 | transmembrane-ephrin receptor activity(GO:0005005) |
0.0 | 1.7 | GO:0000175 | 3'-5'-exoribonuclease activity(GO:0000175) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.4 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.1 | 2.3 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.0 | 2.3 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 2.1 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.1 | 2.0 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.8 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.0 | 1.7 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 1.6 | PID ALK1 PATHWAY | ALK1 signaling events |
0.0 | 1.2 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.1 | 1.1 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.4 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 3.9 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 3.6 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 2.9 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 2.8 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 2.7 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 2.5 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.1 | 2.3 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.1 | 1.8 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.1 | 1.6 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |