Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SRF | hg38_v1_chr6_+_43171260_43171281 | -0.26 | 5.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_+_36541484 Show fit | 4.06 |
ENST00000346786.2
|
myosin light chain 9 |
|
chr10_-_62816341 Show fit | 2.78 |
ENST00000242480.4
ENST00000637191.1 |
early growth response 2 |
|
chr10_-_62816309 Show fit | 2.72 |
ENST00000411732.3
|
early growth response 2 |
|
chr8_+_96584920 Show fit | 2.69 |
ENST00000521590.5
|
syndecan 2 |
|
chr5_+_93583212 Show fit | 2.41 |
ENST00000327111.8
|
nuclear receptor subfamily 2 group F member 1 |
|
chr20_+_36541511 Show fit | 2.10 |
ENST00000279022.7
|
myosin light chain 9 |
|
chr10_+_31321152 Show fit | 1.60 |
ENST00000446923.7
|
zinc finger E-box binding homeobox 1 |
|
chr14_+_103928432 Show fit | 1.40 |
ENST00000409874.9
|
tudor domain containing 9 |
|
chr9_-_76906090 Show fit | 1.40 |
ENST00000376718.8
|
prune homolog 2 with BCH domain |
|
chr19_+_2476118 Show fit | 1.34 |
ENST00000215631.9
ENST00000587345.1 |
growth arrest and DNA damage inducible beta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.2 | GO:0045652 | regulation of megakaryocyte differentiation(GO:0045652) |
1.8 | 5.5 | GO:0021593 | rhombomere morphogenesis(GO:0021593) rhombomere 3 morphogenesis(GO:0021658) |
0.0 | 3.8 | GO:0010718 | positive regulation of epithelial to mesenchymal transition(GO:0010718) |
0.4 | 2.7 | GO:0008218 | bioluminescence(GO:0008218) |
0.1 | 2.6 | GO:1900745 | positive regulation of p38MAPK cascade(GO:1900745) |
0.0 | 2.4 | GO:0010977 | negative regulation of neuron projection development(GO:0010977) |
0.2 | 1.6 | GO:0045602 | negative regulation of endothelial cell differentiation(GO:0045602) |
0.1 | 1.4 | GO:0034587 | piRNA metabolic process(GO:0034587) |
0.3 | 1.3 | GO:0055014 | atrial cardiac muscle cell differentiation(GO:0055011) atrial cardiac muscle cell development(GO:0055014) |
0.4 | 1.2 | GO:0098758 | regulation of interleukin-1 biosynthetic process(GO:0045360) positive regulation of interleukin-1 biosynthetic process(GO:0045362) interleukin-1 beta biosynthetic process(GO:0050720) response to interleukin-8(GO:0098758) cellular response to interleukin-8(GO:0098759) regulation of progesterone biosynthetic process(GO:2000182) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.1 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 2.7 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 1.7 | GO:0031430 | M band(GO:0031430) |
0.2 | 1.4 | GO:0071547 | piP-body(GO:0071547) |
0.1 | 0.6 | GO:0030485 | smooth muscle contractile fiber(GO:0030485) |
0.0 | 0.6 | GO:0046930 | pore complex(GO:0046930) |
0.0 | 0.6 | GO:0044322 | endoplasmic reticulum quality control compartment(GO:0044322) |
0.0 | 0.5 | GO:0097038 | perinuclear endoplasmic reticulum(GO:0097038) |
0.0 | 0.4 | GO:0032982 | myosin filament(GO:0032982) |
0.0 | 0.4 | GO:0000124 | SAGA complex(GO:0000124) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.7 | GO:0032036 | myosin heavy chain binding(GO:0032036) |
0.1 | 5.5 | GO:0071837 | HMG box domain binding(GO:0071837) |
0.0 | 2.9 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.3 | 2.4 | GO:0044323 | retinoic acid-responsive element binding(GO:0044323) |
0.0 | 1.6 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 1.4 | GO:0004004 | ATP-dependent RNA helicase activity(GO:0004004) |
0.0 | 1.3 | GO:0050681 | androgen receptor binding(GO:0050681) |
0.2 | 1.2 | GO:0044729 | hemi-methylated DNA-binding(GO:0044729) |
0.1 | 0.8 | GO:0016403 | dimethylargininase activity(GO:0016403) |
0.0 | 0.8 | GO:0008179 | adenylate cyclase binding(GO:0008179) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.9 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.1 | 7.0 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
0.1 | 2.7 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.1 | 2.6 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 1.3 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 1.0 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 0.4 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.2 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.0 | 5.7 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 2.7 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.0 | 1.9 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.8 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.0 | 1.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 0.6 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
0.0 | 0.4 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.0 | 0.3 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.3 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |