Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
STAT5A | hg38_v1_chr17_+_42289213_42289327, hg38_v1_chr17_+_42288464_42288543, hg38_v1_chr17_+_42288429_42288448 | 0.24 | 5.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_34782259 Show fit | 2.26 |
ENST00000373362.3
|
gap junction protein beta 3 |
|
chr20_+_59676661 Show fit | 2.26 |
ENST00000355648.8
|
phosphatase and actin regulator 3 |
|
chr4_+_40192949 Show fit | 1.97 |
ENST00000507851.5
ENST00000615577.4 ENST00000613272.4 |
ras homolog family member H |
|
chr12_-_8662703 Show fit | 1.22 |
ENST00000535336.5
|
microfibril associated protein 5 |
|
chr12_-_8662619 Show fit | 1.20 |
ENST00000544889.1
ENST00000543369.5 |
microfibril associated protein 5 |
|
chr11_-_102798148 Show fit | 1.20 |
ENST00000315274.7
|
matrix metallopeptidase 1 |
|
chr12_-_8662073 Show fit | 1.13 |
ENST00000535411.5
ENST00000540087.5 |
microfibril associated protein 5 |
|
chr3_-_50611767 Show fit | 1.02 |
ENST00000443053.6
ENST00000348721.4 |
cytokine inducible SH2 containing protein |
|
chr4_+_40193642 Show fit | 1.02 |
ENST00000617441.4
ENST00000503941.5 |
ras homolog family member H |
|
chr18_+_63775369 Show fit | 1.00 |
ENST00000540675.5
|
serpin family B member 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.6 | GO:0060216 | definitive hemopoiesis(GO:0060216) |
0.1 | 3.0 | GO:0009312 | oligosaccharide biosynthetic process(GO:0009312) |
0.0 | 3.0 | GO:0034260 | negative regulation of GTPase activity(GO:0034260) |
0.2 | 2.3 | GO:0038044 | transforming growth factor-beta secretion(GO:0038044) |
0.0 | 2.2 | GO:0031424 | keratinization(GO:0031424) |
0.4 | 2.0 | GO:0090362 | positive regulation of platelet-derived growth factor production(GO:0090362) |
0.0 | 2.0 | GO:0071300 | cellular response to retinoic acid(GO:0071300) |
0.2 | 1.9 | GO:0061709 | reticulophagy(GO:0061709) |
0.0 | 1.8 | GO:0010923 | negative regulation of phosphatase activity(GO:0010923) |
0.0 | 1.4 | GO:0030032 | lamellipodium assembly(GO:0030032) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.6 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 3.2 | GO:0001772 | immunological synapse(GO:0001772) |
0.1 | 2.9 | GO:0005922 | connexon complex(GO:0005922) |
0.6 | 2.3 | GO:0034685 | integrin alphav-beta6 complex(GO:0034685) |
0.0 | 2.3 | GO:0016363 | nuclear matrix(GO:0016363) |
0.0 | 2.2 | GO:0005801 | cis-Golgi network(GO:0005801) |
0.0 | 1.3 | GO:0001533 | cornified envelope(GO:0001533) |
0.4 | 1.1 | GO:0030936 | collagen type XIII trimer(GO:0005600) transmembrane collagen trimer(GO:0030936) |
0.0 | 1.0 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.1 | 0.9 | GO:0097524 | sperm plasma membrane(GO:0097524) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 3.3 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.0 | 3.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 3.0 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.0 | 3.0 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 2.8 | GO:0001618 | virus receptor activity(GO:0001618) |
0.5 | 2.7 | GO:0047273 | galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity(GO:0047273) |
0.2 | 2.4 | GO:0005243 | gap junction channel activity(GO:0005243) |
0.0 | 2.0 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.0 | 1.3 | GO:0034237 | protein kinase A regulatory subunit binding(GO:0034237) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | PID NOTCH PATHWAY | Notch signaling pathway |
0.1 | 2.3 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 2.0 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 1.4 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 1.1 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 1.1 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.1 | 1.0 | ST JAK STAT PATHWAY | Jak-STAT Pathway |
0.0 | 0.8 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.8 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.0 | 0.7 | PID IL1 PATHWAY | IL1-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.0 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.1 | 2.8 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 1.7 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 1.3 | REACTOME FANCONI ANEMIA PATHWAY | Genes involved in Fanconi Anemia pathway |
0.0 | 1.3 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.0 | 1.2 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.0 | 1.0 | REACTOME GROWTH HORMONE RECEPTOR SIGNALING | Genes involved in Growth hormone receptor signaling |
0.0 | 0.9 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 0.7 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.0 | 0.7 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |