Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TAL1 | hg38_v1_chr1_-_47231715_47231786 | 0.63 | 9.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_52452139 Show fit | 1.71 |
ENST00000252252.4
|
keratin 6B |
|
chr18_-_49849827 Show fit | 1.64 |
ENST00000592688.1
|
myosin VB |
|
chr12_-_52473798 Show fit | 1.50 |
ENST00000252250.7
|
keratin 6C |
|
chr8_-_56320098 Show fit | 1.43 |
ENST00000303749.8
ENST00000396721.6 |
short chain dehydrogenase/reductase family 16C member 5 |
|
chr4_+_48016764 Show fit | 1.37 |
ENST00000295461.10
|
NIPA like domain containing 1 |
|
chr19_+_35116262 Show fit | 1.19 |
ENST00000604255.5
ENST00000344013.10 ENST00000346446.9 ENST00000603449.5 ENST00000605550.5 ENST00000604804.5 ENST00000605552.5 |
FXYD domain containing ion transport regulator 3 |
|
chr2_-_31138429 Show fit | 1.11 |
ENST00000349752.10
|
polypeptide N-acetylgalactosaminyltransferase 14 |
|
chr20_+_63696643 Show fit | 1.11 |
ENST00000369996.3
|
TNF receptor superfamily member 6b |
|
chr10_+_80413817 Show fit | 1.10 |
ENST00000372187.9
|
peroxiredoxin like 2A |
|
chr4_-_80073057 Show fit | 1.05 |
ENST00000681710.1
|
ANTXR cell adhesion molecule 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.3 | GO:0070268 | cornification(GO:0070268) |
0.2 | 5.6 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.1 | 5.3 | GO:1901998 | toxin transport(GO:1901998) |
0.0 | 5.2 | GO:1902476 | chloride transmembrane transport(GO:1902476) |
0.0 | 2.8 | GO:0006953 | acute-phase response(GO:0006953) |
0.2 | 2.6 | GO:0015820 | leucine transport(GO:0015820) |
0.2 | 2.5 | GO:0031642 | negative regulation of myelination(GO:0031642) |
0.5 | 2.4 | GO:0090362 | positive regulation of platelet-derived growth factor production(GO:0090362) |
0.1 | 2.4 | GO:0016540 | protein autoprocessing(GO:0016540) |
0.1 | 2.0 | GO:0070445 | oligodendrocyte progenitor proliferation(GO:0070444) regulation of oligodendrocyte progenitor proliferation(GO:0070445) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.2 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 5.1 | GO:0034707 | chloride channel complex(GO:0034707) |
0.0 | 5.0 | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116) |
0.1 | 4.8 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 4.8 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 3.6 | GO:0030056 | hemidesmosome(GO:0030056) |
0.0 | 3.2 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.2 | 3.0 | GO:0045179 | apical cortex(GO:0045179) |
0.1 | 3.0 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 2.9 | GO:0031227 | intrinsic component of endoplasmic reticulum membrane(GO:0031227) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.7 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 6.0 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 3.5 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.1 | 2.9 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.1 | 2.8 | GO:0000146 | microfilament motor activity(GO:0000146) |
0.1 | 2.4 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.2 | 2.2 | GO:0031014 | troponin T binding(GO:0031014) |
0.1 | 2.2 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
0.0 | 2.2 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.1 | 1.9 | GO:0015095 | magnesium ion transmembrane transporter activity(GO:0015095) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.2 | 3.7 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 2.7 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.1 | 2.6 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.1 | 2.6 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 2.5 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
0.0 | 2.0 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.5 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.0 | 1.2 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.2 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.5 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.1 | 3.7 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 3.2 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.0 | 2.5 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.0 | 2.2 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 1.9 | REACTOME SHC1 EVENTS IN ERBB4 SIGNALING | Genes involved in SHC1 events in ERBB4 signaling |
0.0 | 1.8 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.0 | 1.7 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 1.6 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 1.6 | REACTOME MHC CLASS II ANTIGEN PRESENTATION | Genes involved in MHC class II antigen presentation |