Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TBP | hg38_v1_chr6_+_170554333_170554396 | 0.32 | 4.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_52452139 Show fit | 3.93 |
ENST00000252252.4
|
keratin 6B |
|
chr12_-_52473798 Show fit | 3.13 |
ENST00000252250.7
|
keratin 6C |
|
chr1_+_153031195 Show fit | 2.83 |
ENST00000307098.5
|
small proline rich protein 1B |
|
chr11_+_18266254 Show fit | 2.39 |
ENST00000532858.5
ENST00000649195.1 ENST00000356524.9 ENST00000405158.2 |
serum amyloid A1 |
|
chr17_-_41518878 Show fit | 2.24 |
ENST00000254043.8
|
keratin 15 |
|
chr11_-_18248662 Show fit | 2.18 |
ENST00000256733.9
|
serum amyloid A2 |
|
chr19_-_6720641 Show fit | 2.17 |
ENST00000245907.11
|
complement C3 |
|
chr12_-_52493250 Show fit | 2.04 |
ENST00000330722.7
|
keratin 6A |
|
chr1_-_153390976 Show fit | 2.00 |
ENST00000368732.5
ENST00000368733.4 |
S100 calcium binding protein A8 |
|
chr20_-_45254556 Show fit | 1.88 |
ENST00000338380.2
|
secretory leukocyte peptidase inhibitor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.9 | GO:0070268 | cornification(GO:0070268) |
0.1 | 6.4 | GO:0006953 | acute-phase response(GO:0006953) |
0.2 | 3.0 | GO:0048672 | positive regulation of collateral sprouting(GO:0048672) |
0.5 | 2.9 | GO:0060356 | leucine import(GO:0060356) |
0.0 | 2.9 | GO:0006970 | response to osmotic stress(GO:0006970) |
0.8 | 2.3 | GO:0051040 | regulation of calcium-independent cell-cell adhesion(GO:0051040) |
0.7 | 2.2 | GO:0001794 | type IIa hypersensitivity(GO:0001794) regulation of type IIa hypersensitivity(GO:0001796) type II hypersensitivity(GO:0002445) regulation of type II hypersensitivity(GO:0002892) |
0.2 | 2.1 | GO:0032119 | sequestering of zinc ion(GO:0032119) |
0.5 | 2.0 | GO:0051710 | cytolysis by symbiont of host cells(GO:0001897) regulation of cytolysis in other organism(GO:0051710) |
0.3 | 1.8 | GO:0002225 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.0 | GO:0045095 | keratin filament(GO:0045095) |
0.1 | 5.6 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 4.7 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 3.7 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 3.1 | GO:0071682 | endocytic vesicle lumen(GO:0071682) |
0.0 | 3.1 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 2.9 | GO:0035580 | specific granule lumen(GO:0035580) |
0.0 | 2.8 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.1 | 2.6 | GO:0034364 | high-density lipoprotein particle(GO:0034364) |
0.0 | 2.2 | GO:0045111 | intermediate filament cytoskeleton(GO:0045111) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.3 | GO:0005198 | structural molecule activity(GO:0005198) |
0.0 | 8.4 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.1 | 6.4 | GO:0042056 | chemoattractant activity(GO:0042056) |
0.0 | 5.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.2 | 4.2 | GO:0019841 | retinol binding(GO:0019841) |
0.5 | 3.8 | GO:0035662 | Toll-like receptor 4 binding(GO:0035662) |
0.0 | 3.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.2 | 2.9 | GO:0005432 | calcium:sodium antiporter activity(GO:0005432) |
0.1 | 2.7 | GO:0008009 | chemokine activity(GO:0008009) |
0.1 | 2.3 | GO:0003708 | retinoic acid receptor activity(GO:0003708) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.2 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 2.8 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 2.4 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 2.4 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.1 | 2.2 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.3 | 1.6 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.5 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.0 | 1.4 | PID ALK1 PATHWAY | ALK1 signaling events |
0.1 | 1.3 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 1.2 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.7 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 3.1 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.1 | 2.5 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.1 | 2.4 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |
0.1 | 1.5 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.1 | 1.3 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.1 | 1.3 | REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS | Genes involved in Activation of the AP-1 family of transcription factors |
0.1 | 1.2 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 1.2 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |
0.1 | 1.1 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |