Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TBX3 | hg38_v1_chr12_-_114683590_114683652, hg38_v1_chr12_-_114684151_114684221 | -0.28 | 5.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_242449478 Show fit | 1.27 |
ENST00000427495.5
|
phospholipase D family member 5 |
|
chr4_+_40193642 Show fit | 1.25 |
ENST00000617441.4
ENST00000503941.5 |
ras homolog family member H |
|
chr1_-_209652329 Show fit | 1.12 |
ENST00000367030.7
ENST00000356082.9 |
laminin subunit beta 3 |
|
chr19_-_35513641 Show fit | 1.09 |
ENST00000339686.8
ENST00000447113.6 |
dermokine |
|
chr9_+_122519141 Show fit | 0.74 |
ENST00000340750.1
|
olfactory receptor family 1 subfamily J member 4 |
|
chr3_+_189631373 Show fit | 0.64 |
ENST00000264731.8
ENST00000418709.6 ENST00000320472.9 ENST00000392460.7 ENST00000440651.6 |
tumor protein p63 |
|
chr2_+_17540670 Show fit | 0.62 |
ENST00000451533.5
ENST00000295156.9 |
visinin like 1 |
|
chr1_-_183590876 Show fit | 0.61 |
ENST00000367536.5
|
neutrophil cytosolic factor 2 |
|
chr8_-_138914034 Show fit | 0.61 |
ENST00000303045.11
|
collagen type XXII alpha 1 chain |
|
chr21_-_44920918 Show fit | 0.58 |
ENST00000522688.5
|
integrin subunit beta 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0034260 | negative regulation of GTPase activity(GO:0034260) |
0.0 | 1.2 | GO:0035774 | positive regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0035774) |
0.3 | 1.1 | GO:1903575 | cornified envelope assembly(GO:1903575) |
0.0 | 1.1 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.2 | 0.6 | GO:0007499 | ectoderm and mesoderm interaction(GO:0007499) |
0.0 | 0.6 | GO:0097242 | beta-amyloid clearance(GO:0097242) |
0.0 | 0.6 | GO:0045730 | respiratory burst(GO:0045730) |
0.2 | 0.5 | GO:0046967 | cytosol to ER transport(GO:0046967) |
0.1 | 0.5 | GO:2000491 | positive regulation of hepatic stellate cell activation(GO:2000491) |
0.0 | 0.5 | GO:0021842 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0001772 | immunological synapse(GO:0001772) |
0.2 | 1.1 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.0 | 0.8 | GO:0030660 | Golgi-associated vesicle membrane(GO:0030660) |
0.1 | 0.6 | GO:0034688 | integrin alphaM-beta2 complex(GO:0034688) |
0.1 | 0.6 | GO:0032010 | phagolysosome(GO:0032010) |
0.1 | 0.5 | GO:0042825 | TAP complex(GO:0042825) |
0.1 | 0.4 | GO:0030936 | collagen type XIII trimer(GO:0005600) transmembrane collagen trimer(GO:0030936) |
0.0 | 0.4 | GO:0031415 | NatA complex(GO:0031415) |
0.0 | 0.4 | GO:0030126 | COPI vesicle coat(GO:0030126) |
0.0 | 0.4 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.1 | 0.6 | GO:0030369 | ICAM-3 receptor activity(GO:0030369) |
0.1 | 0.6 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
0.0 | 0.6 | GO:0097371 | MDM2/MDM4 family protein binding(GO:0097371) |
0.1 | 0.5 | GO:0015440 | peptide-transporting ATPase activity(GO:0015440) MHC class Ib protein binding(GO:0023029) TAP2 binding(GO:0046979) |
0.0 | 0.5 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 0.5 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
0.0 | 0.5 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
0.1 | 0.4 | GO:1990190 | peptide-glutamate-N-acetyltransferase activity(GO:1990190) |
0.1 | 0.4 | GO:0015184 | L-cystine transmembrane transporter activity(GO:0015184) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.1 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 1.0 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 0.7 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.0 | 0.6 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 0.4 | PID S1P S1P1 PATHWAY | S1P1 pathway |
0.0 | 0.3 | PID ARF6 DOWNSTREAM PATHWAY | Arf6 downstream pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 0.7 | REACTOME SHC1 EVENTS IN ERBB4 SIGNALING | Genes involved in SHC1 events in ERBB4 signaling |
0.0 | 0.5 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.0 | 0.4 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 0.4 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
0.0 | 0.3 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.0 | 0.2 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.0 | 0.2 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |