Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MYOG | hg38_v1_chr1_-_203086001_203086019 | -0.72 | 4.2e-02 | Click! |
TCF3 | hg38_v1_chr19_-_1652576_1652622 | -0.42 | 3.0e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.5 | GO:0035583 | sequestering of TGFbeta in extracellular matrix(GO:0035583) |
0.1 | 3.0 | GO:0006527 | arginine catabolic process(GO:0006527) |
0.0 | 2.6 | GO:0044070 | regulation of anion transport(GO:0044070) |
0.3 | 2.4 | GO:0070236 | negative regulation of activation-induced cell death of T cells(GO:0070236) |
0.0 | 2.4 | GO:0043462 | regulation of ATPase activity(GO:0043462) |
0.2 | 2.3 | GO:0060842 | arterial endothelial cell differentiation(GO:0060842) |
0.0 | 2.3 | GO:0050690 | regulation of defense response to virus by virus(GO:0050690) |
0.1 | 1.7 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.0 | 1.7 | GO:0030318 | melanocyte differentiation(GO:0030318) |
0.0 | 1.7 | GO:0010257 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.3 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 2.2 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.0 | 2.2 | GO:0031674 | I band(GO:0031674) |
0.0 | 2.0 | GO:0031430 | M band(GO:0031430) |
0.1 | 1.9 | GO:0001891 | phagocytic cup(GO:0001891) |
0.0 | 1.9 | GO:0031093 | platelet alpha granule lumen(GO:0031093) |
0.0 | 1.8 | GO:0043204 | perikaryon(GO:0043204) |
0.3 | 1.7 | GO:0034673 | inhibin-betaglycan-ActRII complex(GO:0034673) |
0.1 | 1.7 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
0.0 | 1.7 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.0 | GO:0016403 | dimethylargininase activity(GO:0016403) |
0.6 | 2.8 | GO:0050436 | microfibril binding(GO:0050436) |
0.0 | 2.7 | GO:0008565 | protein transporter activity(GO:0008565) |
0.2 | 2.5 | GO:0005225 | volume-sensitive anion channel activity(GO:0005225) |
0.3 | 2.3 | GO:0043426 | MRF binding(GO:0043426) |
0.0 | 2.0 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.1 | 1.7 | GO:0005114 | type II transforming growth factor beta receptor binding(GO:0005114) |
0.3 | 1.6 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |
0.2 | 1.6 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.2 | 1.5 | GO:0030023 | extracellular matrix constituent conferring elasticity(GO:0030023) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.0 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.0 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.1 | 1.8 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 1.6 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.0 | 1.6 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
0.1 | 1.5 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 1.4 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.0 | 1.4 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 1.3 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 1.3 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.3 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 2.3 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.7 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.0 | 1.7 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 1.6 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 1.2 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 1.0 | REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND | Genes involved in Removal of the Flap Intermediate from the C-strand |
0.1 | 1.0 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.9 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.0 | 0.9 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |