Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TFAP2B | hg38_v1_chr6_+_50818857_50818877 | 0.69 | 5.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_153615858 Show fit | 1.90 |
ENST00000476873.5
|
S100 calcium binding protein A14 |
|
chr1_+_160400543 Show fit | 1.72 |
ENST00000368061.3
|
VANGL planar cell polarity protein 2 |
|
chr17_-_41521719 Show fit | 1.63 |
ENST00000393976.6
|
keratin 15 |
|
chr16_+_22814154 Show fit | 1.23 |
ENST00000261374.4
|
heparan sulfate-glucosamine 3-sulfotransferase 2 |
|
chr16_+_68644988 Show fit | 1.20 |
ENST00000429102.6
|
cadherin 3 |
|
chr16_+_68645290 Show fit | 1.10 |
ENST00000264012.9
|
cadherin 3 |
|
chr12_-_52520371 Show fit | 1.09 |
ENST00000549420.1
ENST00000252242.9 ENST00000551275.1 ENST00000546577.1 |
keratin 5 |
|
chr6_+_54846735 Show fit | 1.08 |
ENST00000306858.8
|
family with sequence similarity 83 member B |
|
chr20_+_63696643 Show fit | 0.97 |
ENST00000369996.3
|
TNF receptor superfamily member 6b |
|
chr19_-_19628197 Show fit | 0.94 |
ENST00000586703.1
ENST00000591042.1 ENST00000407877.8 |
lysophosphatidic acid receptor 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 2.3 | GO:0032912 | negative regulation of transforming growth factor beta2 production(GO:0032912) negative regulation of hair follicle maturation(GO:0048817) regulation of melanosome transport(GO:1902908) |
0.0 | 2.1 | GO:0070268 | cornification(GO:0070268) |
0.1 | 1.9 | GO:0090026 | positive regulation of monocyte chemotaxis(GO:0090026) |
0.6 | 1.7 | GO:0061346 | non-canonical Wnt signaling pathway involved in heart development(GO:0061341) planar cell polarity pathway involved in heart morphogenesis(GO:0061346) |
0.1 | 1.7 | GO:0046940 | nucleoside monophosphate phosphorylation(GO:0046940) |
0.1 | 1.5 | GO:0038203 | TORC2 signaling(GO:0038203) |
0.1 | 1.5 | GO:0033169 | histone H3-K9 demethylation(GO:0033169) |
0.0 | 1.3 | GO:0033006 | regulation of mast cell activation involved in immune response(GO:0033006) regulation of mast cell degranulation(GO:0043304) |
0.3 | 1.2 | GO:0016256 | N-glycan processing to lysosome(GO:0016256) |
0.2 | 1.1 | GO:0010482 | epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.8 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.6 | 1.7 | GO:0060187 | cell pole(GO:0060187) |
0.1 | 1.7 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 1.4 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 1.3 | GO:0005882 | intermediate filament(GO:0005882) |
0.1 | 1.2 | GO:0044194 | cytolytic granule(GO:0044194) |
0.0 | 0.8 | GO:0005861 | troponin complex(GO:0005861) |
0.1 | 0.7 | GO:0042105 | alpha-beta T cell receptor complex(GO:0042105) |
0.0 | 0.7 | GO:0032420 | stereocilium(GO:0032420) |
0.0 | 0.6 | GO:0097427 | microtubule bundle(GO:0097427) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0097110 | scaffold protein binding(GO:0097110) |
0.0 | 1.9 | GO:0042379 | chemokine receptor binding(GO:0042379) |
0.3 | 1.7 | GO:0046899 | nucleoside triphosphate adenylate kinase activity(GO:0046899) |
0.1 | 1.5 | GO:0032454 | histone demethylase activity (H3-K9 specific)(GO:0032454) |
0.2 | 1.2 | GO:0003976 | UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity(GO:0003976) |
0.2 | 1.2 | GO:0030348 | syntaxin-3 binding(GO:0030348) |
0.2 | 1.2 | GO:0008467 | [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467) |
0.1 | 1.1 | GO:0004630 | phospholipase D activity(GO:0004630) |
0.0 | 1.1 | GO:0005035 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
0.1 | 1.0 | GO:0033549 | MAP kinase phosphatase activity(GO:0033549) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.9 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 1.9 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.0 | 1.6 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 1.3 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 1.1 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
0.0 | 1.0 | ST G ALPHA I PATHWAY | G alpha i Pathway |
0.0 | 0.9 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
0.0 | 0.9 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.0 | 0.9 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 0.8 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.2 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 1.2 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |
0.1 | 0.9 | REACTOME PECAM1 INTERACTIONS | Genes involved in PECAM1 interactions |
0.0 | 0.9 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.0 | 0.8 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |
0.0 | 0.8 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |
0.0 | 0.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.7 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |
0.0 | 0.7 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.0 | 0.4 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |