Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TFAP2C | hg38_v1_chr20_+_56629296_56629321 | 0.38 | 3.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_-_31042808 Show fit | 2.48 |
ENST00000434452.5
|
desmocollin 3 |
|
chr18_-_31042733 Show fit | 2.31 |
ENST00000360428.9
|
desmocollin 3 |
|
chr17_-_41518878 Show fit | 1.85 |
ENST00000254043.8
|
keratin 15 |
|
chr19_-_35501878 Show fit | 1.78 |
ENST00000593342.5
ENST00000601650.1 ENST00000408915.6 |
dermokine |
|
chr2_-_46462 Show fit | 1.72 |
ENST00000327669.5
|
family with sequence similarity 110 member C |
|
chr19_-_54173190 Show fit | 1.56 |
ENST00000617472.4
|
transmembrane channel like 4 |
|
chr12_-_52493250 Show fit | 1.56 |
ENST00000330722.7
|
keratin 6A |
|
chr19_-_38773432 Show fit | 1.55 |
ENST00000599035.1
ENST00000378626.5 |
galectin 7 |
|
chr19_+_38789198 Show fit | 1.51 |
ENST00000314980.5
|
galectin 7B |
|
chr1_-_26960413 Show fit | 1.49 |
ENST00000320567.6
|
keratinocyte differentiation factor 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.5 | GO:0070268 | cornification(GO:0070268) |
0.5 | 2.9 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.3 | 2.8 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
0.0 | 2.8 | GO:0007173 | epidermal growth factor receptor signaling pathway(GO:0007173) |
0.4 | 2.7 | GO:0010481 | epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482) |
0.6 | 2.5 | GO:1903575 | cornified envelope assembly(GO:1903575) |
0.4 | 2.4 | GO:0035602 | fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow(GO:0035602) fibroblast growth factor receptor signaling pathway involved in hemopoiesis(GO:0035603) fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow(GO:0035604) |
0.1 | 2.4 | GO:0035360 | positive regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035360) |
0.1 | 2.4 | GO:0033169 | histone H3-K9 demethylation(GO:0033169) |
0.3 | 2.0 | GO:0003011 | involuntary skeletal muscle contraction(GO:0003011) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.4 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 4.6 | GO:0005938 | cell cortex(GO:0005938) |
0.0 | 3.9 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.4 | 2.9 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.0 | 2.9 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 2.9 | GO:0045111 | intermediate filament cytoskeleton(GO:0045111) |
0.0 | 2.8 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 1.9 | GO:0031932 | TORC2 complex(GO:0031932) |
0.2 | 1.7 | GO:0098560 | cytoplasmic side of late endosome membrane(GO:0098560) |
0.1 | 1.7 | GO:0046581 | intercellular canaliculus(GO:0046581) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 4.1 | GO:0005088 | Ras guanyl-nucleotide exchange factor activity(GO:0005088) |
0.1 | 3.9 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 3.8 | GO:0097110 | scaffold protein binding(GO:0097110) |
0.0 | 2.8 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.2 | 2.6 | GO:0005007 | fibroblast growth factor-activated receptor activity(GO:0005007) |
0.1 | 2.4 | GO:0032454 | histone demethylase activity (H3-K9 specific)(GO:0032454) |
0.0 | 2.4 | GO:0019894 | kinesin binding(GO:0019894) |
0.4 | 2.2 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.1 | 2.1 | GO:0036312 | phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.0 | 3.0 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 3.0 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 2.8 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 2.4 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
0.1 | 2.2 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 2.2 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 2.2 | PID FGF PATHWAY | FGF signaling pathway |
0.1 | 1.9 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.7 | PID EPO PATHWAY | EPO signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.2 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 2.9 | REACTOME FGFR2C LIGAND BINDING AND ACTIVATION | Genes involved in FGFR2c ligand binding and activation |
0.1 | 2.6 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |
0.1 | 2.1 | REACTOME P2Y RECEPTORS | Genes involved in P2Y receptors |
0.0 | 2.1 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.1 | 2.0 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.0 | 2.0 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |
0.0 | 1.4 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 1.4 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.0 | 1.3 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |