Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MSC | hg38_v1_chr8_-_71844402_71844429 | 0.82 | 1.3e-02 | Click! |
TFAP4 | hg38_v1_chr16_-_4273014_4273065 | -0.66 | 7.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_55722857 Show fit | 1.15 |
ENST00000424486.3
|
transmembrane protein 100 |
|
chr13_+_101452629 Show fit | 0.98 |
ENST00000622834.4
ENST00000545560.6 ENST00000376180.8 |
integrin subunit beta like 1 |
|
chr11_-_111912871 Show fit | 0.96 |
ENST00000528628.5
|
crystallin alpha B |
|
chr13_+_101452569 Show fit | 0.94 |
ENST00000618057.4
|
integrin subunit beta like 1 |
|
chr5_+_176810552 Show fit | 0.92 |
ENST00000329542.9
|
unc-5 netrin receptor A |
|
chr2_-_224947030 Show fit | 0.92 |
ENST00000409592.7
|
dedicator of cytokinesis 10 |
|
chr20_+_34704336 Show fit | 0.89 |
ENST00000374809.6
ENST00000374810.8 ENST00000451665.5 |
tumor protein p53 inducible nuclear protein 2 |
|
chr6_-_31729260 Show fit | 0.86 |
ENST00000375789.7
|
dimethylarginine dimethylaminohydrolase 2 |
|
chr6_-_31729785 Show fit | 0.81 |
ENST00000416410.6
|
dimethylarginine dimethylaminohydrolase 2 |
|
chr8_-_94949350 Show fit | 0.79 |
ENST00000448464.6
ENST00000342697.5 |
tumor protein p53 inducible nuclear protein 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.3 | GO:0006527 | arginine catabolic process(GO:0006527) |
0.1 | 1.7 | GO:0060842 | arterial endothelial cell differentiation(GO:0060842) |
0.1 | 1.6 | GO:0006824 | cobalt ion transport(GO:0006824) |
0.0 | 1.4 | GO:0060292 | long term synaptic depression(GO:0060292) |
0.2 | 1.1 | GO:0060399 | positive regulation of growth hormone receptor signaling pathway(GO:0060399) |
0.1 | 1.1 | GO:0070236 | negative regulation of activation-induced cell death of T cells(GO:0070236) |
0.1 | 1.0 | GO:0072513 | positive regulation of secondary heart field cardioblast proliferation(GO:0072513) |
0.1 | 1.0 | GO:0002315 | marginal zone B cell differentiation(GO:0002315) |
0.1 | 1.0 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.1 | 0.9 | GO:0010966 | regulation of phosphate transport(GO:0010966) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.3 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.0 | 2.0 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 1.2 | GO:0032809 | neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298) |
0.0 | 1.1 | GO:0010369 | chromocenter(GO:0010369) |
0.1 | 1.0 | GO:0005883 | neurofilament(GO:0005883) |
0.1 | 0.9 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.0 | 0.7 | GO:0032045 | guanyl-nucleotide exchange factor complex(GO:0032045) |
0.0 | 0.7 | GO:0097431 | pericentriolar material(GO:0000242) mitotic spindle pole(GO:0097431) |
0.1 | 0.6 | GO:0060171 | stereocilium membrane(GO:0060171) |
0.0 | 0.6 | GO:0097225 | sperm midpiece(GO:0097225) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.3 | GO:0016403 | dimethylargininase activity(GO:0016403) |
0.1 | 1.6 | GO:0031419 | cobalamin binding(GO:0031419) |
0.1 | 1.1 | GO:0043426 | MRF binding(GO:0043426) |
0.1 | 1.0 | GO:0030160 | GKAP/Homer scaffold activity(GO:0030160) |
0.0 | 1.0 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.0 | 0.9 | GO:0070016 | armadillo repeat domain binding(GO:0070016) |
0.1 | 0.8 | GO:0047057 | oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor(GO:0016900) vitamin-K-epoxide reductase (warfarin-sensitive) activity(GO:0047057) |
0.0 | 0.8 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.0 | 0.7 | GO:0071837 | HMG box domain binding(GO:0071837) |
0.0 | 0.6 | GO:0050811 | GABA receptor binding(GO:0050811) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.0 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 0.8 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 0.6 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 0.4 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 0.4 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.3 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.9 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 0.7 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.0 | 0.6 | REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS | Genes involved in Presynaptic nicotinic acetylcholine receptors |
0.0 | 0.4 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.0 | 0.3 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.0 | 0.2 | REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND | Genes involved in Removal of the Flap Intermediate from the C-strand |