Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TFDP1 | hg38_v1_chr13_+_113584683_113584762 | 0.03 | 9.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_37170133 Show fit | 1.40 |
ENST00000373509.6
|
Pim-1 proto-oncogene, serine/threonine kinase |
|
chr15_+_80695277 Show fit | 1.21 |
ENST00000258884.5
ENST00000558464.1 |
abhydrolase domain containing 17C, depalmitoylase |
|
chr5_+_53480619 Show fit | 1.16 |
ENST00000396947.7
ENST00000256759.8 |
follistatin |
|
chr1_+_4654732 Show fit | 1.15 |
ENST00000378190.7
|
adherens junctions associated protein 1 |
|
chr12_+_122021850 Show fit | 1.08 |
ENST00000261822.5
|
BAF chromatin remodeling complex subunit BCL7A |
|
chr19_+_33796268 Show fit | 1.02 |
ENST00000587559.5
ENST00000588637.5 |
potassium channel tetramerization domain containing 15 |
|
chr8_+_60678705 Show fit | 1.00 |
ENST00000423902.7
|
chromodomain helicase DNA binding protein 7 |
|
chr7_+_69598465 Show fit | 0.86 |
ENST00000342771.10
|
activator of transcription and developmental regulator AUTS2 |
|
chr1_+_26529745 Show fit | 0.84 |
ENST00000374168.7
ENST00000374166.8 |
ribosomal protein S6 kinase A1 |
|
chr7_-_44325653 Show fit | 0.83 |
ENST00000440254.6
|
calcium/calmodulin dependent protein kinase II beta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.5 | GO:0051823 | regulation of synapse structural plasticity(GO:0051823) |
0.4 | 2.4 | GO:1904274 | tricellular tight junction assembly(GO:1904274) |
0.0 | 2.4 | GO:0051028 | mRNA transport(GO:0051028) |
0.3 | 1.6 | GO:0030860 | regulation of polarized epithelial cell differentiation(GO:0030860) |
0.2 | 1.6 | GO:2000620 | innate vocalization behavior(GO:0098582) positive regulation of histone H4-K16 acetylation(GO:2000620) |
0.5 | 1.4 | GO:0032877 | positive regulation of DNA endoreduplication(GO:0032877) |
0.2 | 1.4 | GO:0036484 | trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) |
0.1 | 1.4 | GO:0070934 | CRD-mediated mRNA stabilization(GO:0070934) |
0.3 | 1.3 | GO:0003408 | optic cup formation involved in camera-type eye development(GO:0003408) maintenance of chromatin silencing(GO:0006344) |
0.2 | 1.3 | GO:2000491 | positive regulation of hepatic stellate cell activation(GO:2000491) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.2 | 2.4 | GO:0061689 | tricellular tight junction(GO:0061689) |
0.0 | 2.3 | GO:0070160 | occluding junction(GO:0070160) |
0.1 | 2.1 | GO:0016514 | SWI/SNF complex(GO:0016514) |
0.3 | 1.6 | GO:0044214 | spanning component of plasma membrane(GO:0044214) spanning component of membrane(GO:0089717) |
0.2 | 1.5 | GO:0097452 | GAIT complex(GO:0097452) |
0.0 | 1.5 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.0 | 1.3 | GO:0031143 | pseudopodium(GO:0031143) |
0.0 | 1.2 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
0.0 | 1.2 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.0 | 2.0 | GO:0048027 | mRNA 5'-UTR binding(GO:0048027) |
0.0 | 1.9 | GO:0019212 | phosphatase inhibitor activity(GO:0019212) |
0.1 | 1.8 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.0 | 1.6 | GO:0008143 | poly(A) binding(GO:0008143) |
0.0 | 1.6 | GO:0017147 | Wnt-protein binding(GO:0017147) |
0.1 | 1.4 | GO:0045499 | chemorepellent activity(GO:0045499) |
0.0 | 1.4 | GO:0070182 | DNA polymerase binding(GO:0070182) |
0.0 | 1.4 | GO:0003725 | double-stranded RNA binding(GO:0003725) |
0.0 | 1.4 | GO:0001158 | enhancer sequence-specific DNA binding(GO:0001158) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 2.3 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 2.2 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.1 | 2.1 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 2.1 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.9 | PID ATR PATHWAY | ATR signaling pathway |
0.1 | 1.8 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 1.7 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 1.6 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 1.6 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.5 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |
0.1 | 1.5 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.0 | 1.5 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |
0.1 | 1.4 | REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION | Genes involved in E2F-enabled inhibition of pre-replication complex formation |
0.1 | 1.3 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |
0.1 | 1.3 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.0 | 1.3 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.0 | 1.2 | REACTOME N GLYCAN ANTENNAE ELONGATION IN THE MEDIAL TRANS GOLGI | Genes involved in N-glycan antennae elongation in the medial/trans-Golgi |
0.0 | 1.2 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.0 | 1.2 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |