Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000105967.16 | transcription factor EC | |
ENSG00000187098.17 | melanocyte inducing transcription factor | |
ENSG00000133794.20 | aryl hydrocarbon receptor nuclear translocator like | |
ENSG00000123095.6 | basic helix-loop-helix family member e41 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MITF | hg38_v1_chr3_+_69739425_69739543, hg38_v1_chr3_+_69866217_69866230, hg38_v1_chr3_+_69763726_69763811 | 0.94 | 4.6e-04 | Click! |
BHLHE41 | hg38_v1_chr12_-_26125023_26125047 | -0.87 | 5.1e-03 | Click! |
TFEC | hg38_v1_chr7_-_116030735_116030746 | 0.31 | 4.5e-01 | Click! |
ARNTL | hg38_v1_chr11_+_13277639_13277877 | -0.22 | 6.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_183636065 Show fit | 2.91 |
ENST00000304685.8
|
ral guanine nucleotide dissociation stimulator like 1 |
|
chr19_+_48954850 Show fit | 2.55 |
ENST00000345358.12
ENST00000539787.2 ENST00000415969.6 ENST00000354470.7 ENST00000506183.5 ENST00000391871.4 ENST00000293288.12 |
BCL2 associated X, apoptosis regulator |
|
chr9_-_76692181 Show fit | 2.30 |
ENST00000376717.6
ENST00000223609.10 |
prune homolog 2 with BCH domain |
|
chr19_+_14433284 Show fit | 2.03 |
ENST00000242783.11
|
protein kinase N1 |
|
chr22_+_30607145 Show fit | 1.87 |
ENST00000405742.7
|
transcobalamin 2 |
|
chr22_+_30607072 Show fit | 1.82 |
ENST00000450638.5
|
transcobalamin 2 |
|
chr15_+_41621492 Show fit | 1.79 |
ENST00000570161.6
|
MAX dimerization protein MGA |
|
chr22_+_30607167 Show fit | 1.78 |
ENST00000215838.8
|
transcobalamin 2 |
|
chr1_+_11806096 Show fit | 1.77 |
ENST00000312413.10
ENST00000346436.11 |
chloride voltage-gated channel 6 |
|
chr5_-_172771187 Show fit | 1.76 |
ENST00000239223.4
|
dual specificity phosphatase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 7.2 | GO:0006824 | cobalt ion transport(GO:0006824) |
0.3 | 3.1 | GO:0070495 | regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495) negative regulation of guanyl-nucleotide exchange factor activity(GO:1905098) |
0.2 | 2.7 | GO:0060155 | platelet dense granule organization(GO:0060155) |
0.0 | 2.7 | GO:1903959 | regulation of anion transmembrane transport(GO:1903959) |
0.9 | 2.6 | GO:1902512 | positive regulation of apoptotic DNA fragmentation(GO:1902512) |
0.5 | 2.0 | GO:0035407 | histone H3-T11 phosphorylation(GO:0035407) |
0.4 | 1.8 | GO:0046167 | glycerol-3-phosphate biosynthetic process(GO:0046167) |
0.1 | 1.7 | GO:0006975 | DNA damage induced protein phosphorylation(GO:0006975) |
0.2 | 1.6 | GO:0045629 | negative regulation of T-helper 2 cell differentiation(GO:0045629) |
0.1 | 1.6 | GO:0035970 | peptidyl-threonine dephosphorylation(GO:0035970) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.4 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.0 | 3.6 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 3.5 | GO:0044665 | MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339) |
0.0 | 3.2 | GO:0032154 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.1 | 2.8 | GO:0031083 | BLOC-1 complex(GO:0031083) |
0.2 | 2.6 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.1 | 1.3 | GO:0005879 | axonemal microtubule(GO:0005879) |
0.0 | 1.3 | GO:0035327 | transcriptionally active chromatin(GO:0035327) |
0.0 | 1.3 | GO:0016235 | aggresome(GO:0016235) |
0.1 | 1.2 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 7.2 | GO:0031419 | cobalamin binding(GO:0031419) |
0.2 | 3.4 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
0.6 | 2.9 | GO:0008321 | Ral guanyl-nucleotide exchange factor activity(GO:0008321) |
0.1 | 2.9 | GO:0050699 | WW domain binding(GO:0050699) |
0.2 | 2.6 | GO:0051434 | BH3 domain binding(GO:0051434) |
0.1 | 2.5 | GO:0005247 | voltage-gated chloride channel activity(GO:0005247) |
0.5 | 2.0 | GO:0035402 | histone kinase activity (H3-T11 specific)(GO:0035402) |
0.6 | 1.8 | GO:0008330 | protein tyrosine/threonine phosphatase activity(GO:0008330) |
0.4 | 1.8 | GO:0004370 | glycerol kinase activity(GO:0004370) |
0.0 | 1.8 | GO:0005507 | copper ion binding(GO:0005507) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.4 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.1 | 2.6 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 2.1 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
0.0 | 2.0 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 1.5 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 1.1 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.1 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 1.1 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 0.9 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 0.9 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.8 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.1 | 3.3 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.1 | 2.7 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
0.0 | 1.5 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.0 | 1.4 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.1 | 1.3 | REACTOME DSCAM INTERACTIONS | Genes involved in DSCAM interactions |
0.1 | 0.9 | REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 | Genes involved in IKK complex recruitment mediated by RIP1 |
0.0 | 0.9 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 0.9 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 0.8 | REACTOME BASE FREE SUGAR PHOSPHATE REMOVAL VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY | Genes involved in Base-free sugar-phosphate removal via the single-nucleotide replacement pathway |