Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TLX2 | hg38_v1_chr2_+_74513441_74513559, hg38_v1_chr2_+_74514442_74514494 | -0.58 | 1.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_121873152 Show fit | 1.35 |
ENST00000650826.1
ENST00000650728.1 ENST00000393386.7 ENST00000651390.1 ENST00000651842.1 ENST00000650681.1 |
protein tyrosine phosphatase receptor type Z1 |
|
chr7_+_121873089 Show fit | 1.30 |
ENST00000651065.1
|
protein tyrosine phosphatase receptor type Z1 |
|
chr1_+_86424154 Show fit | 1.25 |
ENST00000370565.5
|
chloride channel accessory 2 |
|
chr10_+_80413817 Show fit | 1.01 |
ENST00000372187.9
|
peroxiredoxin like 2A |
|
chr1_-_153390976 Show fit | 0.89 |
ENST00000368732.5
ENST00000368733.4 |
S100 calcium binding protein A8 |
|
chr10_+_46375645 Show fit | 0.89 |
ENST00000622769.4
|
annexin A8 like 1 |
|
chr8_+_31640358 Show fit | 0.87 |
ENST00000523534.5
|
neuregulin 1 |
|
chr19_-_14979676 Show fit | 0.81 |
ENST00000598504.5
ENST00000597262.1 |
solute carrier family 1 member 6 |
|
chr6_-_138107412 Show fit | 0.77 |
ENST00000421351.4
|
p53 apoptosis effector related to PMP22 |
|
chr10_-_47484081 Show fit | 0.76 |
ENST00000583448.2
ENST00000583874.5 ENST00000585281.6 |
annexin A8 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0070445 | oligodendrocyte progenitor proliferation(GO:0070444) regulation of oligodendrocyte progenitor proliferation(GO:0070445) |
0.0 | 2.3 | GO:0070830 | bicellular tight junction assembly(GO:0070830) |
0.4 | 1.4 | GO:1900138 | negative regulation of phospholipase A2 activity(GO:1900138) |
0.1 | 1.4 | GO:0014809 | regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) |
0.4 | 1.2 | GO:0051040 | regulation of calcium-independent cell-cell adhesion(GO:0051040) |
0.1 | 1.2 | GO:0002934 | desmosome organization(GO:0002934) |
0.0 | 1.2 | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process(GO:0006488) |
0.3 | 1.0 | GO:0002665 | negative regulation of T cell tolerance induction(GO:0002665) negative regulation of T cell anergy(GO:0002668) negative regulation of lymphocyte anergy(GO:0002912) regulation of lymphotoxin A production(GO:0032681) positive regulation of lymphotoxin A production(GO:0032761) regulation of lymphotoxin A biosynthetic process(GO:0043016) positive regulation of lymphotoxin A biosynthetic process(GO:0043017) |
0.1 | 0.9 | GO:0021840 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
0.1 | 0.9 | GO:0032119 | sequestering of zinc ion(GO:0032119) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.7 | GO:0072534 | perineuronal net(GO:0072534) |
0.1 | 2.0 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 1.3 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.1 | 1.2 | GO:0061689 | tricellular tight junction(GO:0061689) |
0.1 | 1.1 | GO:0016013 | syntrophin complex(GO:0016013) |
0.0 | 0.9 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 0.7 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 0.6 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
0.0 | 0.6 | GO:0044295 | axonal growth cone(GO:0044295) |
0.0 | 0.6 | GO:0034385 | very-low-density lipoprotein particle(GO:0034361) triglyceride-rich lipoprotein particle(GO:0034385) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.0 | 2.6 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.1 | 1.9 | GO:0005229 | intracellular calcium activated chloride channel activity(GO:0005229) |
0.1 | 1.8 | GO:0045499 | chemorepellent activity(GO:0045499) |
0.2 | 1.5 | GO:0035662 | Toll-like receptor 4 binding(GO:0035662) |
0.0 | 1.5 | GO:0008009 | chemokine activity(GO:0008009) |
0.0 | 1.4 | GO:0005035 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
0.0 | 1.4 | GO:0046934 | phosphatidylinositol-4,5-bisphosphate 3-kinase activity(GO:0046934) |
0.0 | 1.1 | GO:0050998 | nitric-oxide synthase binding(GO:0050998) |
0.2 | 1.0 | GO:0034040 | lipid-transporting ATPase activity(GO:0034040) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.6 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 1.4 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 1.3 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 1.1 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 0.7 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.0 | 0.6 | PID GMCSF PATHWAY | GMCSF-mediated signaling events |
0.0 | 0.6 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 0.5 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.5 | PID IL5 PATHWAY | IL5-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 1.6 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 1.6 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 1.2 | REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN | Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
0.0 | 1.1 | REACTOME SHC1 EVENTS IN ERBB4 SIGNALING | Genes involved in SHC1 events in ERBB4 signaling |
0.0 | 1.1 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |
0.0 | 1.0 | REACTOME CD28 DEPENDENT VAV1 PATHWAY | Genes involved in CD28 dependent Vav1 pathway |
0.0 | 1.0 | REACTOME IL RECEPTOR SHC SIGNALING | Genes involved in Interleukin receptor SHC signaling |
0.0 | 0.9 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.0 | 0.8 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |