Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TWIST1 | hg38_v1_chr7_-_19117625_19117645 | -0.96 | 1.4e-04 | Click! |
SNAI1 | hg38_v1_chr20_+_49982969_49982989 | 0.47 | 2.4e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.4 | GO:0031424 | keratinization(GO:0031424) |
1.4 | 8.6 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.6 | 8.1 | GO:0038129 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
1.2 | 7.2 | GO:1904274 | tricellular tight junction assembly(GO:1904274) |
0.1 | 6.8 | GO:0051602 | response to electrical stimulus(GO:0051602) |
2.0 | 6.1 | GO:0043000 | Golgi to plasma membrane CFTR protein transport(GO:0043000) |
0.1 | 6.0 | GO:2000249 | regulation of actin cytoskeleton reorganization(GO:2000249) |
0.3 | 5.9 | GO:0015871 | choline transport(GO:0015871) |
1.9 | 5.8 | GO:0032912 | negative regulation of transforming growth factor beta2 production(GO:0032912) negative regulation of hair follicle maturation(GO:0048817) regulation of melanosome transport(GO:1902908) |
0.2 | 5.8 | GO:0090557 | establishment of endothelial intestinal barrier(GO:0090557) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.9 | GO:0045095 | keratin filament(GO:0045095) |
0.4 | 10.5 | GO:0005922 | connexon complex(GO:0005922) |
0.1 | 9.1 | GO:0070160 | occluding junction(GO:0070160) |
0.9 | 9.0 | GO:0061689 | tricellular tight junction(GO:0061689) |
1.2 | 8.6 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.2 | 8.5 | GO:0030673 | axolemma(GO:0030673) |
0.2 | 7.0 | GO:0030057 | desmosome(GO:0030057) |
0.5 | 6.7 | GO:0045179 | apical cortex(GO:0045179) |
0.1 | 6.5 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.4 | 5.7 | GO:0036057 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 13.4 | GO:0098641 | cadherin binding involved in cell-cell adhesion(GO:0098641) |
0.5 | 8.1 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 7.0 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.3 | 6.3 | GO:0019841 | retinol binding(GO:0019841) |
0.0 | 6.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.7 | 6.1 | GO:0015220 | choline transmembrane transporter activity(GO:0015220) |
0.2 | 6.0 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.2 | 5.9 | GO:0038191 | neuropilin binding(GO:0038191) |
0.1 | 5.2 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.2 | 5.0 | GO:0043560 | insulin receptor substrate binding(GO:0043560) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.1 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.2 | 8.3 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.1 | 7.6 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.1 | 7.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 6.2 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 4.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.4 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.0 | 3.2 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 2.8 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.1 | 2.7 | ST P38 MAPK PATHWAY | p38 MAPK Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 11.1 | REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION | Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
0.4 | 10.5 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.2 | 8.5 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 8.5 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 8.1 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.3 | 7.2 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.2 | 5.6 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.1 | 4.5 | REACTOME CELL CELL JUNCTION ORGANIZATION | Genes involved in Cell-cell junction organization |
0.1 | 4.1 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.1 | 3.6 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |