Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
XBP1 | hg38_v1_chr22_-_28800042_28800133, hg38_v1_chr22_-_28800558_28800597 | -0.10 | 8.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_94394886 Show fit | 5.05 |
ENST00000297268.11
ENST00000620463.1 |
collagen type I alpha 2 chain |
|
chr5_-_9546066 Show fit | 2.44 |
ENST00000382496.10
ENST00000652226.1 |
semaphorin 5A |
|
chr19_+_49527988 Show fit | 2.03 |
ENST00000270645.8
|
reticulocalbin 3 |
|
chr5_+_120464236 Show fit | 1.71 |
ENST00000407149.7
ENST00000379551.2 |
proline rich 16 |
|
chr5_-_122078249 Show fit | 1.32 |
ENST00000231004.5
|
lysyl oxidase |
|
chr22_+_38468036 Show fit | 1.17 |
ENST00000409006.3
ENST00000216014.9 |
KDEL endoplasmic reticulum protein retention receptor 3 |
|
chr8_+_103372388 Show fit | 0.89 |
ENST00000520337.1
|
collagen triple helix repeat containing 1 |
|
chr14_+_99793375 Show fit | 0.84 |
ENST00000262233.11
ENST00000556714.5 |
EMAP like 1 |
|
chr10_+_87659839 Show fit | 0.80 |
ENST00000456849.2
|
3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
|
chrX_+_9463272 Show fit | 0.74 |
ENST00000407597.7
ENST00000380961.5 ENST00000424279.6 |
transducin beta like 1 X-linked |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.0 | GO:0043589 | skin morphogenesis(GO:0043589) |
0.2 | 2.4 | GO:0048843 | negative regulation of axon extension involved in axon guidance(GO:0048843) |
0.1 | 1.7 | GO:0045793 | positive regulation of cell size(GO:0045793) |
0.0 | 1.4 | GO:0007405 | neuroblast proliferation(GO:0007405) |
0.1 | 1.3 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.2 | 1.2 | GO:0021678 | third ventricle development(GO:0021678) |
0.1 | 1.2 | GO:0006621 | protein retention in ER lumen(GO:0006621) |
0.1 | 1.1 | GO:0016255 | attachment of GPI anchor to protein(GO:0016255) |
0.1 | 0.9 | GO:0043932 | ossification involved in bone remodeling(GO:0043932) |
0.3 | 0.8 | GO:0000103 | sulfate assimilation(GO:0000103) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.0 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 2.2 | GO:0005581 | collagen trimer(GO:0005581) |
0.1 | 1.6 | GO:1990023 | mitotic spindle midzone(GO:1990023) |
0.2 | 1.1 | GO:0042765 | GPI-anchor transamidase complex(GO:0042765) |
0.1 | 0.8 | GO:0030015 | CCR4-NOT core complex(GO:0030015) |
0.0 | 0.8 | GO:0005876 | spindle microtubule(GO:0005876) |
0.0 | 0.6 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.2 | 0.5 | GO:1990667 | PCSK9-AnxA2 complex(GO:1990667) |
0.0 | 0.5 | GO:0016342 | catenin complex(GO:0016342) |
0.0 | 0.4 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.0 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.6 | 2.4 | GO:0035373 | chondroitin sulfate proteoglycan binding(GO:0035373) |
0.2 | 1.3 | GO:0004720 | protein-lysine 6-oxidase activity(GO:0004720) |
0.2 | 1.2 | GO:0046923 | ER retention sequence binding(GO:0046923) |
0.2 | 1.1 | GO:0003923 | GPI-anchor transamidase activity(GO:0003923) |
0.0 | 0.9 | GO:0005109 | frizzled binding(GO:0005109) |
0.0 | 0.8 | GO:0004535 | poly(A)-specific ribonuclease activity(GO:0004535) |
0.0 | 0.8 | GO:0070566 | adenylyltransferase activity(GO:0070566) |
0.0 | 0.8 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
0.0 | 0.6 | GO:0070513 | death domain binding(GO:0070513) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.0 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.0 | 2.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 0.7 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.4 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 0.3 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 0.3 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.2 | ST JAK STAT PATHWAY | Jak-STAT Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.0 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 2.4 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 1.1 | REACTOME POST TRANSLATIONAL MODIFICATION SYNTHESIS OF GPI ANCHORED PROTEINS | Genes involved in Post-translational modification: synthesis of GPI-anchored proteins |
0.0 | 1.0 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.0 | 0.8 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.0 | 0.8 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.0 | 0.7 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 0.4 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |
0.0 | 0.4 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.0 | 0.4 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |