Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
YY1 | hg38_v1_chr14_+_100239121_100239196 | 0.42 | 3.0e-01 | Click! |
YY2 | hg38_v1_chrX_+_21855987_21855987 | 0.05 | 9.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91146195 Show fit | 1.74 |
ENST00000548218.1
|
decorin |
|
chrX_-_107777038 Show fit | 1.28 |
ENST00000480691.2
ENST00000506081.5 ENST00000514426.1 |
TSC22 domain family member 3 |
|
chr12_+_55681711 Show fit | 1.24 |
ENST00000394252.4
|
methyltransferase like 7B |
|
chr12_+_55681647 Show fit | 1.24 |
ENST00000614691.1
|
methyltransferase like 7B |
|
chr3_-_197949869 Show fit | 1.12 |
ENST00000452735.1
ENST00000453254.5 ENST00000455191.5 |
IQ motif containing G |
|
chr14_-_29927596 Show fit | 0.93 |
ENST00000415220.6
|
protein kinase D1 |
|
chr5_+_72107453 Show fit | 0.92 |
ENST00000296755.12
ENST00000511641.2 |
microtubule associated protein 1B |
|
chr1_-_85404494 Show fit | 0.90 |
ENST00000633113.1
|
dimethylarginine dimethylaminohydrolase 1 |
|
chr9_+_36036899 Show fit | 0.89 |
ENST00000377966.4
|
reversion inducing cysteine rich protein with kazal motifs |
|
chr11_+_47248924 Show fit | 0.85 |
ENST00000481889.6
ENST00000436778.5 ENST00000531660.5 ENST00000407404.5 |
nuclear receptor subfamily 1 group H member 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.0 | 3.4 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.1 | 2.4 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.0 | 2.4 | GO:0008625 | extrinsic apoptotic signaling pathway via death domain receptors(GO:0008625) |
0.1 | 2.2 | GO:0007288 | sperm axoneme assembly(GO:0007288) |
0.5 | 2.0 | GO:2000314 | regulation of neural crest formation(GO:0090299) negative regulation of neural crest formation(GO:0090301) negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation(GO:2000314) |
0.6 | 1.7 | GO:0090341 | negative regulation of secretion of lysosomal enzymes(GO:0090341) |
0.3 | 1.7 | GO:0003065 | positive regulation of heart rate by epinephrine(GO:0003065) |
0.0 | 1.7 | GO:0061418 | regulation of transcription from RNA polymerase II promoter in response to hypoxia(GO:0061418) |
0.0 | 1.6 | GO:0070125 | mitochondrial translational elongation(GO:0070125) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
0.0 | 3.2 | GO:0005747 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 3.2 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.2 | 2.5 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 2.4 | GO:0000313 | organellar ribosome(GO:0000313) mitochondrial ribosome(GO:0005761) |
0.2 | 2.3 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
0.2 | 1.6 | GO:0002177 | manchette(GO:0002177) |
0.0 | 1.6 | GO:0000421 | autophagosome membrane(GO:0000421) |
0.0 | 1.4 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.4 | 1.3 | GO:0060987 | lipid tube(GO:0060987) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.8 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 3.1 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.0 | 2.3 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 1.8 | GO:0070513 | death domain binding(GO:0070513) |
0.3 | 1.7 | GO:0032810 | sterol response element binding(GO:0032810) |
0.0 | 1.6 | GO:0035064 | methylated histone binding(GO:0035064) |
0.1 | 1.5 | GO:0048156 | tau protein binding(GO:0048156) |
0.0 | 1.4 | GO:0061631 | ubiquitin conjugating enzyme activity(GO:0061631) |
0.0 | 1.4 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.0 | 1.3 | GO:0030544 | Hsp70 protein binding(GO:0030544) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | PID IGF1 PATHWAY | IGF1 pathway |
0.0 | 2.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.3 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 2.2 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 2.1 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 2.0 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
0.0 | 1.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.3 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.2 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 1.1 | PID LKB1 PATHWAY | LKB1 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 4.5 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 2.7 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 2.5 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.5 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 2.0 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.5 | REACTOME AUTODEGRADATION OF CDH1 BY CDH1 APC C | Genes involved in Autodegradation of Cdh1 by Cdh1:APC/C |
0.0 | 1.4 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.0 | 1.2 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.0 | 1.2 | REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN | Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen |