Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ZBTB18 | hg38_v1_chr1_+_244051275_244051291 | -0.18 | 6.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_188974364 Show fit | 3.43 |
ENST00000304636.9
ENST00000317840.9 |
collagen type III alpha 1 chain |
|
chr1_-_168729187 Show fit | 1.91 |
ENST00000367817.4
|
dermatopontin |
|
chr2_+_151357583 Show fit | 1.78 |
ENST00000243347.5
|
TNF alpha induced protein 6 |
|
chr2_+_33134579 Show fit | 1.62 |
ENST00000418533.6
|
latent transforming growth factor beta binding protein 1 |
|
chr2_+_33134620 Show fit | 1.58 |
ENST00000402934.5
ENST00000404525.5 ENST00000407925.5 |
latent transforming growth factor beta binding protein 1 |
|
chr12_+_1629197 Show fit | 1.28 |
ENST00000397196.7
|
Wnt family member 5B |
|
chr2_-_162242998 Show fit | 1.11 |
ENST00000627638.2
ENST00000447386.5 |
fibroblast activation protein alpha |
|
chr11_+_15114912 Show fit | 1.09 |
ENST00000379556.8
|
INSC spindle orientation adaptor protein |
|
chr2_-_162243375 Show fit | 1.07 |
ENST00000188790.9
ENST00000443424.5 |
fibroblast activation protein alpha |
|
chr15_-_89815332 Show fit | 1.06 |
ENST00000559874.2
|
alanyl aminopeptidase, membrane |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.4 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
0.4 | 3.2 | GO:0035583 | sequestering of TGFbeta in extracellular matrix(GO:0035583) |
0.0 | 2.7 | GO:0006081 | cellular aldehyde metabolic process(GO:0006081) |
0.0 | 2.5 | GO:0043171 | peptide catabolic process(GO:0043171) |
0.5 | 2.2 | GO:0097325 | melanocyte proliferation(GO:0097325) |
0.1 | 2.1 | GO:0043476 | pigment accumulation(GO:0043476) cellular pigment accumulation(GO:0043482) |
0.0 | 1.9 | GO:0030199 | collagen fibril organization(GO:0030199) |
0.1 | 1.8 | GO:0030728 | ovulation(GO:0030728) |
0.1 | 1.4 | GO:0048739 | cardiac muscle fiber development(GO:0048739) |
0.1 | 1.3 | GO:0070307 | lens fiber cell development(GO:0070307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.1 | GO:0001527 | microfibril(GO:0001527) fibril(GO:0043205) |
0.2 | 3.4 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.1 | 2.2 | GO:0071438 | invadopodium membrane(GO:0071438) |
0.0 | 1.8 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.1 | 1.1 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
0.0 | 1.1 | GO:0043218 | compact myelin(GO:0043218) |
0.0 | 1.0 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.0 | 0.6 | GO:0001931 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
0.1 | 0.5 | GO:0000308 | cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308) |
0.0 | 0.4 | GO:0036020 | endolysosome membrane(GO:0036020) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.4 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.6 | 3.2 | GO:0050436 | microfibril binding(GO:0050436) |
0.4 | 2.7 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.1 | 2.5 | GO:0070006 | metalloaminopeptidase activity(GO:0070006) |
0.1 | 2.2 | GO:0008239 | dipeptidyl-peptidase activity(GO:0008239) |
0.0 | 1.8 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.0 | 1.4 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.1 | 1.2 | GO:0015280 | ligand-gated sodium channel activity(GO:0015280) |
0.0 | 1.1 | GO:0005109 | frizzled binding(GO:0005109) |
0.0 | 1.0 | GO:0003785 | actin monomer binding(GO:0003785) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.4 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 3.4 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 2.1 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 1.3 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 0.5 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.0 | 0.5 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 0.5 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.0 | 0.4 | PID ARF 3PATHWAY | Arf1 pathway |
0.0 | 0.3 | PID TRAIL PATHWAY | TRAIL signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.0 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.0 | 0.9 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.0 | 0.9 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.0 | 0.6 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.0 | 0.4 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.0 | 0.4 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.3 | REACTOME IRAK1 RECRUITS IKK COMPLEX | Genes involved in IRAK1 recruits IKK complex |
0.0 | 0.3 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.0 | 0.3 | REACTOME IL 6 SIGNALING | Genes involved in Interleukin-6 signaling |