Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GLI1 | hg38_v1_chr12_+_57459782_57459796, hg38_v1_chr12_+_57460127_57460151 | 0.19 | 6.4e-01 | Click! |
ZIC2 | hg38_v1_chr13_+_99981775_99981791 | 0.16 | 7.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_44809053 Show fit | 0.57 |
ENST00000611077.5
|
basal cell adhesion molecule (Lutheran blood group) |
|
chr7_+_69598465 Show fit | 0.52 |
ENST00000342771.10
|
activator of transcription and developmental regulator AUTS2 |
|
chr19_+_44809089 Show fit | 0.51 |
ENST00000270233.12
ENST00000591520.6 |
basal cell adhesion molecule (Lutheran blood group) |
|
chr8_+_31639222 Show fit | 0.45 |
ENST00000519301.6
ENST00000652698.1 |
neuregulin 1 |
|
chr8_+_31639291 Show fit | 0.45 |
ENST00000651149.1
ENST00000650866.1 |
neuregulin 1 |
|
chr5_+_53480619 Show fit | 0.44 |
ENST00000396947.7
ENST00000256759.8 |
follistatin |
|
chr9_-_122227525 Show fit | 0.41 |
ENST00000373755.6
ENST00000373754.6 |
LIM homeobox 6 |
|
chr8_-_17697654 Show fit | 0.40 |
ENST00000297488.10
|
microtubule associated scaffold protein 1 |
|
chr18_+_23949847 Show fit | 0.38 |
ENST00000588004.1
|
laminin subunit alpha 3 |
|
chr8_+_31639755 Show fit | 0.36 |
ENST00000520407.5
|
neuregulin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | GO:0021842 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) |
0.0 | 0.7 | GO:0071420 | cellular response to histamine(GO:0071420) |
0.0 | 0.6 | GO:0032926 | negative regulation of activin receptor signaling pathway(GO:0032926) |
0.0 | 0.6 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.1 | 0.5 | GO:0098582 | innate vocalization behavior(GO:0098582) positive regulation of histone H4-K16 acetylation(GO:2000620) |
0.0 | 0.5 | GO:0021853 | cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936) |
0.1 | 0.4 | GO:0010157 | response to chlorate(GO:0010157) |
0.0 | 0.4 | GO:0045162 | clustering of voltage-gated sodium channels(GO:0045162) |
0.0 | 0.3 | GO:0048387 | negative regulation of retinoic acid receptor signaling pathway(GO:0048387) |
0.0 | 0.3 | GO:0009235 | cobalamin metabolic process(GO:0009235) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 0.7 | GO:1902711 | GABA-A receptor complex(GO:1902711) |
0.1 | 0.4 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.0 | 0.4 | GO:0044294 | dendritic growth cone(GO:0044294) |
0.0 | 0.4 | GO:0043194 | axon initial segment(GO:0043194) |
0.0 | 0.3 | GO:0042622 | photoreceptor outer segment membrane(GO:0042622) |
0.0 | 0.3 | GO:0016580 | Sin3 complex(GO:0016580) |
0.0 | 0.2 | GO:0043256 | laminin complex(GO:0043256) |
0.0 | 0.2 | GO:0000839 | Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839) |
0.0 | 0.2 | GO:0097129 | cyclin D2-CDK4 complex(GO:0097129) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.4 | 1.1 | GO:0005055 | laminin receptor activity(GO:0005055) |
0.0 | 0.7 | GO:0008503 | benzodiazepine receptor activity(GO:0008503) |
0.0 | 0.6 | GO:0048185 | activin binding(GO:0048185) |
0.0 | 0.4 | GO:0086080 | protein binding involved in heterotypic cell-cell adhesion(GO:0086080) |
0.1 | 0.3 | GO:0097108 | smoothened binding(GO:0005119) hedgehog family protein binding(GO:0097108) |
0.0 | 0.3 | GO:0052650 | NADP-retinol dehydrogenase activity(GO:0052650) |
0.0 | 0.3 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
0.0 | 0.3 | GO:0001222 | transcription corepressor binding(GO:0001222) |
0.1 | 0.2 | GO:0036487 | nitric-oxide synthase inhibitor activity(GO:0036487) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 0.6 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 0.7 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 0.5 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.0 | 0.1 | REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY | Genes involved in Regulation of the Fanconi anemia pathway |
0.0 | 0.0 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |