hg38_v1_chr8_+_103372388_103372433	0.595542	FOXA3_FOXC2	ENST00000520337.1|CTHRC1|ENSG00000164932.13|collagen triple helix repeat containing 1
hg38_v1_chr2_+_127418420_127418448	0.557974	FOXA3_FOXC2	ENST00000234071.8|PROC|ENSG00000115718.18|protein C, inactivator of coagulation factors Va and VIIIa	ENST00000429925.5|PROC|ENSG00000115718.18|protein C, inactivator of coagulation factors Va and VIIIa	ENST00000442644.5|PROC|ENSG00000115718.18|protein C, inactivator of coagulation factors Va and VIIIa
hg38_v1_chr8_+_96584920_96584945	0.52011	FOXA3_FOXC2	ENST00000521590.5|SDC2|ENSG00000169439.12|syndecan 2
hg38_v1_chr9_-_92424427_92424480	0.495682	FOXA3_FOXC2	ENST00000375550.5|OMD|ENSG00000127083.8|osteomodulin
hg38_v1_chr17_-_19387170_19387197	0.466376	FOXA3_FOXC2	ENST00000395592.6|MFAP4|ENSG00000166482.12|microfibril associated protein 4	ENST00000299610.5|MFAP4|ENSG00000166482.12|microfibril associated protein 4
hg38_v1_chr12_-_14885845_14885864	0.422419	FOXA3_FOXC2	ENST00000539261.6|MGP|ENSG00000111341.10|matrix Gla protein	ENST00000228938.5|MGP|ENSG00000111341.10|matrix Gla protein
hg38_v1_chr17_-_68955332_68955409	0.422184	FOXA3_FOXC2	ENST00000269080.6|ABCA8|ENSG00000141338.14|ATP binding cassette subfamily A member 8	ENST00000615593.4|ABCA8|ENSG00000141338.14|ATP binding cassette subfamily A member 8	ENST00000586539.6|ABCA8|ENSG00000141338.14|ATP binding cassette subfamily A member 8	ENST00000430352.6|ABCA8|ENSG00000141338.14|ATP binding cassette subfamily A member 8
hg38_v1_chr2_-_144516154_144516173	0.419809	FOXA3_FOXC2	ENST00000637304.1|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2
hg38_v1_chr2_-_144516397_144516485	0.416144	FOXA3_FOXC2	ENST00000638128.1|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2
hg38_v1_chr8_-_119638780_119638851	0.346828	FOXA3_FOXC2	ENST00000522826.5|ENPP2|ENSG00000136960.13|ectonucleotide pyrophosphatase/phosphodiesterase 2	ENST00000520066.5|ENPP2|ENSG00000136960.13|ectonucleotide pyrophosphatase/phosphodiesterase 2	ENST00000259486.10|ENPP2|ENSG00000136960.13|ectonucleotide pyrophosphatase/phosphodiesterase 2	ENST00000075322.11|ENPP2|ENSG00000136960.13|ectonucleotide pyrophosphatase/phosphodiesterase 2
hg38_v1_chr9_-_20382461_20382495	0.258326	FOXA3_FOXC2	ENST00000380321.5|MLLT3|ENSG00000171843.17|MLLT3 super elongation complex subunit	ENST00000629733.3|MLLT3|ENSG00000171843.17|MLLT3 super elongation complex subunit
hg38_v1_chr18_-_28036585_28036614	0.256585	FOXA3_FOXC2	ENST00000399380.7|CDH2|ENSG00000170558.10|cadherin 2
hg38_v1_chrX_+_86714623_86714661	0.242787	FOXA3_FOXC2	ENST00000484479.1|DACH2|ENSG00000126733.21|dachshund family transcription factor 2
hg38_v1_chr2_-_174846405_174846430	0.235889	FOXA3_FOXC2	ENST00000409597.5|CHN1|ENSG00000128656.15|chimerin 1	ENST00000413882.6|CHN1|ENSG00000128656.15|chimerin 1
hg38_v1_chr4_-_137532452_137532519	0.207989	FOXA3_FOXC2	ENST00000412923.6|PCDH18|ENSG00000189184.12|protocadherin 18	ENST00000511115.5|PCDH18|ENSG00000189184.12|protocadherin 18	ENST00000344876.9|PCDH18|ENSG00000189184.12|protocadherin 18	ENST00000507846.5|PCDH18|ENSG00000189184.12|protocadherin 18	ENST00000510305.5|PCDH18|ENSG00000189184.12|protocadherin 18	ENST00000611581.1|PCDH18|ENSG00000189184.12|protocadherin 18
hg38_v1_chr3_+_69936583_69936600	0.2064	FOXA3_FOXC2	ENST00000314557.10|MITF|ENSG00000187098.17|melanocyte inducing transcription factor	ENST00000394351.9|MITF|ENSG00000187098.17|melanocyte inducing transcription factor
hg38_v1_chr3_+_148730100_148730124	0.205501	FOXA3_FOXC2	ENST00000474935.5|AGTR1|ENSG00000144891.19|angiotensin II receptor type 1	ENST00000475347.5|AGTR1|ENSG00000144891.19|angiotensin II receptor type 1	ENST00000461609.1|AGTR1|ENSG00000144891.19|angiotensin II receptor type 1
hg38_v1_chr21_-_26843063_26843075	0.179334	FOXA3_FOXC2	ENST00000678221.1|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr7_+_107168961_107169010	0.1767	FOXA3_FOXC2	ENST00000468410.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000478930.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000464009.1|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000222574.9|HBP1|ENSG00000105856.14|HMG-box transcription factor 1
hg38_v1_chr10_+_69088096_69088117	0.174952	FOXA3_FOXC2	ENST00000242465.4|SRGN|ENSG00000122862.5|serglycin
hg38_v1_chr21_-_26843012_26843029	0.173421	FOXA3_FOXC2	ENST00000517777.6|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr18_-_54959391_54959479	0.169967	FOXA3_FOXC2	ENST00000591504.6|CCDC68|ENSG00000166510.14|coiled-coil domain containing 68
hg38_v1_chr14_+_20688756_20688783	0.168807	FOXA3_FOXC2	ENST00000397990.5|ANG|ENSG00000214274.10|angiogenin	ENST00000555597.1|RNASE4|ENSG00000258818.4|ribonuclease A family member 4
hg38_v1_chr10_-_20897288_20897318	0.168163	FOXA3_FOXC2	ENST00000377122.9|NEBL|ENSG00000078114.19|nebulette
hg38_v1_chr3_+_114294020_114294041	0.167379	FOXA3_FOXC2	ENST00000383671.8|TIGIT|ENSG00000181847.12|T cell immunoreceptor with Ig and ITIM domains
hg38_v1_chr10_+_94089067_94089095	0.167235	FOXA3_FOXC2	ENST00000371375.1|PLCE1|ENSG00000138193.16|phospholipase C epsilon 1	ENST00000675218.1|PLCE1|ENSG00000138193.16|phospholipase C epsilon 1
hg38_v1_chr6_+_72212887_72212902	0.164253	FOXA3_FOXC2	ENST00000523963.5|RIMS1|ENSG00000079841.18|regulating synaptic membrane exocytosis 1
hg38_v1_chr6_+_72212802_72212813	0.16322	FOXA3_FOXC2	ENST00000401910.7|RIMS1|ENSG00000079841.18|regulating synaptic membrane exocytosis 1
hg38_v1_chr4_-_185775271_185775297	0.159427	FOXA3_FOXC2	ENST00000430503.5|SORBS2|ENSG00000154556.18|sorbin and SH3 domain containing 2	ENST00000319454.10|SORBS2|ENSG00000154556.18|sorbin and SH3 domain containing 2	ENST00000450341.5|SORBS2|ENSG00000154556.18|sorbin and SH3 domain containing 2
hg38_v1_chr10_+_94089034_94089061	0.157179	FOXA3_FOXC2	ENST00000676102.1|PLCE1|ENSG00000138193.16|phospholipase C epsilon 1	ENST00000371385.8|PLCE1|ENSG00000138193.16|phospholipase C epsilon 1
hg38_v1_chr20_+_33235987_33236003	0.145885	FOXA3_FOXC2	ENST00000375422.6|BPIFA1|ENSG00000198183.12|BPI fold containing family A member 1	ENST00000375413.8|BPIFA1|ENSG00000198183.12|BPI fold containing family A member 1	ENST00000354297.9|BPIFA1|ENSG00000198183.12|BPI fold containing family A member 1
hg38_v1_chr5_+_40841308_40841387	0.143778	FOXA3_FOXC2	ENST00000381677.4|CARD6|ENSG00000132357.14|caspase recruitment domain family member 6	ENST00000254691.10|CARD6|ENSG00000132357.14|caspase recruitment domain family member 6
hg38_v1_chr2_-_174847015_174847030	0.140161	FOXA3_FOXC2	ENST00000650938.1|CHN1|ENSG00000128656.15|chimerin 1
hg38_v1_chr2_+_108607140_108607161	0.139917	FOXA3_FOXC2	ENST00000410093.5|LIMS1|ENSG00000169756.16|LIM zinc finger domain containing 1
hg38_v1_chr3_-_186362223_186362241	0.132494	FOXA3_FOXC2	ENST00000265022.8|DGKG|ENSG00000058866.15|diacylglycerol kinase gamma
hg38_v1_chr6_+_52420992_52421042	0.126186	FOXA3_FOXC2	ENST00000636954.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000636566.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000638075.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1
hg38_v1_chr6_+_122471913_122471942	0.111595	FOXA3_FOXC2	ENST00000615438.4|PKIB|ENSG00000135549.15|cAMP-dependent protein kinase inhibitor beta	ENST00000392491.6|PKIB|ENSG00000135549.15|cAMP-dependent protein kinase inhibitor beta
hg38_v1_chr10_-_48274567_48274710	0.110746	FOXA3_FOXC2	ENST00000636244.1|FRMPD2|ENSG00000170324.21|FERM and PDZ domain containing 2	ENST00000374201.8|FRMPD2|ENSG00000170324.21|FERM and PDZ domain containing 2
hg38_v1_chr2_+_87748087_87748087	0.106895	FOXA3_FOXC2	ENST00000359481.9|PLGLB2|ENSG00000125551.19|plasminogen like B2
hg38_v1_chr7_+_134891566_134891625	0.101766	FOXA3_FOXC2	ENST00000424922.5|CALD1|ENSG00000122786.20|caldesmon 1	ENST00000495522.1|CALD1|ENSG00000122786.20|caldesmon 1
hg38_v1_chr16_-_87936529_87936580	0.0983727	FOXA3_FOXC2	ENST00000649794.3|CA5A|ENSG00000174990.8|carbonic anhydrase 5A	ENST00000649158.1|CA5A|ENSG00000174990.8|carbonic anhydrase 5A	ENST00000648177.1|CA5A|ENSG00000174990.8|carbonic anhydrase 5A
hg38_v1_chr14_-_100569780_100569797	0.097363	FOXA3_FOXC2	ENST00000355173.7|BEGAIN|ENSG00000183092.17|brain enriched guanylate kinase associated
hg38_v1_chr11_-_82997394_82997432	0.0955358	FOXA3_FOXC2	ENST00000525117.5|RAB30|ENSG00000137502.10|RAB30, member RAS oncogene family	ENST00000532548.5|RAB30|ENSG00000137502.10|RAB30, member RAS oncogene family
hg38_v1_chr6_-_117425905_117425947	0.0945379	FOXA3_FOXC2	ENST00000368507.8|ROS1|ENSG00000047936.11|ROS proto-oncogene 1, receptor tyrosine kinase
hg38_v1_chr6_-_117425855_117425885	0.0942157	FOXA3_FOXC2	ENST00000368508.7|ROS1|ENSG00000047936.11|ROS proto-oncogene 1, receptor tyrosine kinase
hg38_v1_chr7_+_134745460_134745486	0.0927352	FOXA3_FOXC2	ENST00000436461.6|CALD1|ENSG00000122786.20|caldesmon 1
hg38_v1_chr12_-_76486061_76486108	0.0905728	FOXA3_FOXC2	ENST00000548341.5|OSBPL8|ENSG00000091039.17|oxysterol binding protein like 8
hg38_v1_chr17_-_28368012_28368029	0.0883268	FOXA3_FOXC2	ENST00000555059.2|ENSG00000273171.1|ENSG00000273171.1|novel protein, readthrough between VTN and SEBOX
hg38_v1_chr4_+_85475131_85475163	0.08685	FOXA3_FOXC2	ENST00000395184.6|ARHGAP24|ENSG00000138639.18|Rho GTPase activating protein 24
hg38_v1_chr9_-_107489754_107489776	0.0851218	FOXA3_FOXC2	ENST00000610832.1|KLF4|ENSG00000136826.15|Kruppel like factor 4	ENST00000374672.5|KLF4|ENSG00000136826.15|Kruppel like factor 4
hg38_v1_chrX_+_81202066_81202150	0.0849433	FOXA3_FOXC2	ENST00000373212.6|SH3BGRL|ENSG00000131171.13|SH3 domain binding glutamate rich protein like
hg38_v1_chr1_-_56966133_56966141	0.0849357	FOXA3_FOXC2	ENST00000535057.5|C8B|ENSG00000021852.13|complement C8 beta chain	ENST00000543257.5|C8B|ENSG00000021852.13|complement C8 beta chain
hg38_v1_chr2_-_144517663_144518026	0.0848199	FOXA3_FOXC2	ENST00000427902.5|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000462355.2|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000470879.5|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000409487.7|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000435831.5|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000630572.2|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2
hg38_v1_chr1_-_56966006_56966023	0.0847819	FOXA3_FOXC2	ENST00000371237.9|C8B|ENSG00000021852.13|complement C8 beta chain
hg38_v1_chr6_+_101398788_101398823	0.0846513	FOXA3_FOXC2	ENST00000369138.5|GRIK2|ENSG00000164418.22|glutamate ionotropic receptor kainate type subunit 2	ENST00000413795.5|GRIK2|ENSG00000164418.22|glutamate ionotropic receptor kainate type subunit 2	ENST00000358361.7|GRIK2|ENSG00000164418.22|glutamate ionotropic receptor kainate type subunit 2
hg38_v1_chr3_-_114624193_114624238	0.0843157	FOXA3_FOXC2	ENST00000481632.5|ZBTB20|ENSG00000181722.17|zinc finger and BTB domain containing 20
hg38_v1_chr1_+_222928415_222928434	0.0842056	FOXA3_FOXC2	ENST00000284476.7|DISP1|ENSG00000154309.9|dispatched RND transporter family member 1
hg38_v1_chr14_-_74084393_74084468	0.0836777	FOXA3_FOXC2	ENST00000350259.8|ALDH6A1|ENSG00000119711.13|aldehyde dehydrogenase 6 family member A1	ENST00000553458.6|ALDH6A1|ENSG00000119711.13|aldehyde dehydrogenase 6 family member A1
hg38_v1_chr11_-_82997477_82997481	0.0808569	FOXA3_FOXC2	ENST00000534301.5|RAB30|ENSG00000137502.10|RAB30, member RAS oncogene family
hg38_v1_chr4_-_151325488_151325638	0.0788208	FOXA3_FOXC2	ENST00000604030.7|SH3D19|ENSG00000109686.19|SH3 domain containing 19
hg38_v1_chr2_-_87021844_87021852	0.0783098	FOXA3_FOXC2	ENST00000355705.4|PLGLB1|ENSG00000183281.15|plasminogen like B1	ENST00000409310.6|PLGLB1|ENSG00000183281.15|plasminogen like B1
hg38_v1_chr19_+_926001_926047	0.0764098	FOXA3_FOXC2	ENST00000263620.8|ARID3A|ENSG00000116017.11|AT-rich interaction domain 3A
hg38_v1_chr6_-_87095059_87095113	0.0726663	FOXA3_FOXC2	ENST00000369582.6|CGA|ENSG00000135346.9|glycoprotein hormones, alpha polypeptide	ENST00000610310.3|CGA|ENSG00000135346.9|glycoprotein hormones, alpha polypeptide	ENST00000630630.2|CGA|ENSG00000135346.9|glycoprotein hormones, alpha polypeptide	ENST00000627148.3|CGA|ENSG00000135346.9|glycoprotein hormones, alpha polypeptide	ENST00000625577.1|CGA|ENSG00000135346.9|glycoprotein hormones, alpha polypeptide
hg38_v1_chr17_-_31314066_31314110	0.0712751	FOXA3_FOXC2	ENST00000577894.1|EVI2B|ENSG00000185862.7|ecotropic viral integration site 2B
hg38_v1_chr2_+_165294031_165294085	0.0684658	FOXA3_FOXC2	ENST00000283256.10|SCN2A|ENSG00000136531.19|sodium voltage-gated channel alpha subunit 2
hg38_v1_chr7_+_143132069_143132084	0.0678621	FOXA3_FOXC2	ENST00000291009.4|PIP|ENSG00000159763.4|prolactin induced protein
hg38_v1_chr6_+_108560906_108560970	0.0654651	FOXA3_FOXC2	ENST00000406360.2|FOXO3|ENSG00000118689.15|forkhead box O3
hg38_v1_chr10_+_61901678_61901706	0.0646155	FOXA3_FOXC2	ENST00000644638.1|ARID5B|ENSG00000150347.17|AT-rich interaction domain 5B	ENST00000681100.1|ARID5B|ENSG00000150347.17|AT-rich interaction domain 5B	ENST00000279873.12|ARID5B|ENSG00000150347.17|AT-rich interaction domain 5B
hg38_v1_chr2_+_174395721_174395808	0.0632034	FOXA3_FOXC2	ENST00000272732.11|SCRN3|ENSG00000144306.15|secernin 3	ENST00000458563.5|SCRN3|ENSG00000144306.15|secernin 3	ENST00000409673.7|SCRN3|ENSG00000144306.15|secernin 3	ENST00000435964.1|SCRN3|ENSG00000144306.15|secernin 3	ENST00000424069.5|SCRN3|ENSG00000144306.15|secernin 3	ENST00000427038.5|SCRN3|ENSG00000144306.15|secernin 3
hg38_v1_chr10_+_122980448_122980480	0.0616099	FOXA3_FOXC2	ENST00000405485.2|PSTK|ENSG00000179988.15|phosphoseryl-tRNA kinase
hg38_v1_chr15_+_22094522_22094522	0.060623	FOXA3_FOXC2	ENST00000328795.5|OR4N4|ENSG00000183706.5|olfactory receptor family 4 subfamily N member 4
hg38_v1_chr4_-_69961007_69961007	0.0602319	FOXA3_FOXC2	ENST00000353151.3|CSN2|ENSG00000135222.6|casein beta
hg38_v1_chr11_+_65890627_65890680	0.0586108	FOXA3_FOXC2	ENST00000312579.4|CCDC85B|ENSG00000175602.4|coiled-coil domain containing 85B
hg38_v1_chr10_+_122980392_122980440	0.058451	FOXA3_FOXC2	ENST00000406217.8|PSTK|ENSG00000179988.15|phosphoseryl-tRNA kinase
hg38_v1_chr3_-_187737943_187737954	0.0552414	FOXA3_FOXC2	ENST00000438077.1|BCL6|ENSG00000113916.18|BCL6 transcription repressor
hg38_v1_chr13_-_74133892_74133941	0.0550016	FOXA3_FOXC2	ENST00000377669.7|KLF12|ENSG00000118922.18|Kruppel like factor 12
hg38_v1_chr1_+_74235377_74235415	0.0546179	FOXA3_FOXC2	ENST00000326637.8|TNNI3K|ENSG00000116783.15|TNNI3 interacting kinase
hg38_v1_chr7_-_138627444_138627444	0.0544591	FOXA3_FOXC2	ENST00000463557.1|SVOPL|ENSG00000157703.16|SVOP like
hg38_v1_chr4_-_21948733_21948815	0.0539797	FOXA3_FOXC2	ENST00000447367.6|KCNIP4|ENSG00000185774.16|potassium voltage-gated channel interacting protein 4	ENST00000382152.7|KCNIP4|ENSG00000185774.16|potassium voltage-gated channel interacting protein 4
hg38_v1_chr15_+_60004305_60004319	0.0537258	FOXA3_FOXC2	ENST00000396057.6|FOXB1|ENSG00000171956.7|forkhead box B1
hg38_v1_chr1_+_18631513_18631529	0.0527838	FOXA3_FOXC2	ENST00000400661.3|PAX7|ENSG00000009709.12|paired box 7
hg38_v1_chr1_+_151766655_151766701	0.0524431	FOXA3_FOXC2	ENST00000400999.7|OAZ3|ENSG00000143450.19|ornithine decarboxylase antizyme 3
hg38_v1_chr3_+_69936629_69936723	0.0524036	FOXA3_FOXC2	ENST00000394348.2|MITF|ENSG00000187098.17|melanocyte inducing transcription factor	ENST00000531774.1|MITF|ENSG00000187098.17|melanocyte inducing transcription factor
hg38_v1_chr5_+_141330494_141330571	0.0522677	FOXA3_FOXC2	ENST00000517417.3|PCDHGA1|ENSG00000204956.6|protocadherin gamma subfamily A, 1	ENST00000378105.4|PCDHGA1|ENSG00000204956.6|protocadherin gamma subfamily A, 1
hg38_v1_chr2_-_65366650_65366683	0.0518852	FOXA3_FOXC2	ENST00000443619.6|SPRED2|ENSG00000198369.10|sprouty related EVH1 domain containing 2
hg38_v1_chr18_+_3449413_3449619	0.0518797	FOXA3_FOXC2	ENST00000549253.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr2_-_105438503_105438520	0.0512063	FOXA3_FOXC2	ENST00000393352.7|FHL2|ENSG00000115641.19|four and a half LIM domains 2	ENST00000607522.1|FHL2|ENSG00000115641.19|four and a half LIM domains 2
hg38_v1_chr6_+_37929959_37930061	0.0508161	FOXA3_FOXC2	ENST00000373389.5|ZFAND3|ENSG00000156639.12|zinc finger AN1-type containing 3
hg38_v1_chr19_+_49877660_49877682	0.0505096	FOXA3_FOXC2	ENST00000535102.6|TBC1D17|ENSG00000104946.13|TBC1 domain family member 17
hg38_v1_chr1_-_150629470_150629619	0.0498836	FOXA3_FOXC2	ENST00000638926.1|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000503241.1|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000369016.8|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000339643.9|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000271690.12|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000356527.9|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000362052.7|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000503345.1|ENSA|ENSG00000143420.19|endosulfine alpha	ENST00000369014.10|ENSA|ENSG00000143420.19|endosulfine alpha
hg38_v1_chr13_-_49401497_49401599	0.0496646	FOXA3_FOXC2	ENST00000457041.5|CAB39L|ENSG00000102547.19|calcium binding protein 39 like	ENST00000355854.8|CAB39L|ENSG00000102547.19|calcium binding protein 39 like
hg38_v1_chr4_+_85475167_85475239	0.0496492	FOXA3_FOXC2	ENST00000503995.5|ARHGAP24|ENSG00000138639.18|Rho GTPase activating protein 24
hg38_v1_chr19_+_49877694_49877722	0.0490173	FOXA3_FOXC2	ENST00000221543.10|TBC1D17|ENSG00000104946.13|TBC1 domain family member 17
hg38_v1_chr7_-_107803215_107803230	0.0484741	FOXA3_FOXC2	ENST00000340010.10|SLC26A3|ENSG00000091138.13|solute carrier family 26 member 3	ENST00000453332.1|SLC26A3|ENSG00000091138.13|solute carrier family 26 member 3
hg38_v1_chr8_+_74824526_74824543	0.0476945	FOXA3_FOXC2	ENST00000649643.1|PI15|ENSG00000137558.9|peptidase inhibitor 15	ENST00000260113.7|PI15|ENSG00000137558.9|peptidase inhibitor 15
hg38_v1_chr7_+_151341764_151341829	0.0475372	FOXA3_FOXC2	ENST00000413040.7|NUB1|ENSG00000013374.17|negative regulator of ubiquitin like proteins 1	ENST00000470229.6|NUB1|ENSG00000013374.17|negative regulator of ubiquitin like proteins 1	ENST00000568733.6|NUB1|ENSG00000013374.17|negative regulator of ubiquitin like proteins 1
hg38_v1_chr2_-_187448244_187448259	0.0475212	FOXA3_FOXC2	ENST00000392370.8|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor	ENST00000410068.5|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor	ENST00000447403.5|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor	ENST00000410102.5|CALCRL|ENSG00000064989.13|calcitonin receptor like receptor
hg38_v1_chr9_-_41189310_41189436	0.0470257	FOXA3_FOXC2	ENST00000456520.5|CBWD6|ENSG00000215126.11|COBW domain containing 6	ENST00000377391.8|CBWD6|ENSG00000215126.11|COBW domain containing 6	ENST00000613716.4|CBWD6|ENSG00000215126.11|COBW domain containing 6	ENST00000617933.1|CBWD6|ENSG00000215126.11|COBW domain containing 6
hg38_v1_chr18_+_75210789_75210807	0.0455593	FOXA3_FOXC2	ENST00000580243.3|TSHZ1|ENSG00000179981.11|teashirt zinc finger homeobox 1
hg38_v1_chr5_+_143812161_143812161	0.04462	FOXA3_FOXC2	ENST00000289448.4|HMHB1|ENSG00000158497.6|histocompatibility minor HB-1
hg38_v1_chr1_+_18631006_18631129	0.044295	FOXA3_FOXC2	ENST00000375375.7|PAX7|ENSG00000009709.12|paired box 7
hg38_v1_chr4_-_169757873_169757951	0.0437825	FOXA3_FOXC2	ENST00000393381.3|HPF1|ENSG00000056050.7|histone PARylation factor 1
hg38_v1_chr4_-_151227881_151228030	0.0421079	FOXA3_FOXC2	ENST00000652233.1|SH3D19|ENSG00000109686.19|SH3 domain containing 19	ENST00000514152.5|SH3D19|ENSG00000109686.19|SH3 domain containing 19
hg38_v1_chr15_-_40307825_40307860	0.0418799	FOXA3_FOXC2	ENST00000456256.6|PLCB2|ENSG00000137841.12|phospholipase C beta 2	ENST00000557821.5|PLCB2|ENSG00000137841.12|phospholipase C beta 2
hg38_v1_chr6_-_160664270_160664276	0.0417265	FOXA3_FOXC2	ENST00000316300.10|LPA|ENSG00000198670.12|lipoprotein(a)
hg38_v1_chr14_+_104801082_104801111	0.0413836	FOXA3_FOXC2	ENST00000342537.8|ZBTB42|ENSG00000179627.10|zinc finger and BTB domain containing 42
hg38_v1_chr20_+_45406560_45406650	0.041134	FOXA3_FOXC2	ENST00000372717.5|DBNDD2|ENSG00000244274.9|dysbindin domain containing 2	ENST00000360981.8|DBNDD2|ENSG00000244274.9|dysbindin domain containing 2
hg38_v1_chr17_+_4710622_4710712	0.0405533	FOXA3_FOXC2	ENST00000574954.5|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000269260.7|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000346341.6|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000572457.5|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000381488.10|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000412477.7|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000571428.5|ARRB2|ENSG00000141480.18|arrestin beta 2	ENST00000575877.5|ARRB2|ENSG00000141480.18|arrestin beta 2
hg38_v1_chr19_-_18791297_18791313	0.0402981	FOXA3_FOXC2	ENST00000542601.6|COMP|ENSG00000105664.11|cartilage oligomeric matrix protein	ENST00000222271.7|COMP|ENSG00000105664.11|cartilage oligomeric matrix protein	ENST00000425807.1|COMP|ENSG00000105664.11|cartilage oligomeric matrix protein
hg38_v1_chr3_+_119597874_119597892	0.040109	FOXA3_FOXC2	ENST00000488919.5|PLA1A|ENSG00000144837.9|phospholipase A1 member A	ENST00000273371.9|PLA1A|ENSG00000144837.9|phospholipase A1 member A	ENST00000495992.5|PLA1A|ENSG00000144837.9|phospholipase A1 member A
hg38_v1_chr6_-_112254485_112254553	0.0397103	FOXA3_FOXC2	ENST00000521398.5|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000424408.6|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000243219.7|LAMA4|ENSG00000112769.20|laminin subunit alpha 4
hg38_v1_chr7_+_134779625_134779662	0.0392757	FOXA3_FOXC2	ENST00000454108.5|CALD1|ENSG00000122786.20|caldesmon 1	ENST00000361675.7|CALD1|ENSG00000122786.20|caldesmon 1
hg38_v1_chr6_+_36676489_36676531	0.0392538	FOXA3_FOXC2	ENST00000448526.6|CDKN1A|ENSG00000124762.14|cyclin dependent kinase inhibitor 1A
hg38_v1_chr2_+_134838610_134838623	0.0388026	FOXA3_FOXC2	ENST00000356140.10|ACMSD|ENSG00000153086.14|aminocarboxymuconate semialdehyde decarboxylase	ENST00000392928.5|ACMSD|ENSG00000153086.14|aminocarboxymuconate semialdehyde decarboxylase
hg38_v1_chr5_+_76875177_76875301	0.038782	FOXA3_FOXC2	ENST00000613039.1|S100Z|ENSG00000171643.14|S100 calcium binding protein Z
hg38_v1_chr1_+_50105666_50105693	0.0384675	FOXA3_FOXC2	ENST00000651347.1|ELAVL4|ENSG00000162374.18|ELAV like RNA binding protein 4
hg38_v1_chr3_-_100114488_100114513	0.03735	FOXA3_FOXC2	ENST00000477258.2|FILIP1L|ENSG00000168386.19|filamin A interacting protein 1 like	ENST00000354552.7|FILIP1L|ENSG00000168386.19|filamin A interacting protein 1 like	ENST00000331335.9|FILIP1L|ENSG00000168386.19|filamin A interacting protein 1 like	ENST00000398326.2|FILIP1L|ENSG00000168386.19|filamin A interacting protein 1 like
hg38_v1_chr19_+_49877425_49877565	0.0368387	FOXA3_FOXC2	ENST00000622860.4|TBC1D17|ENSG00000104946.13|TBC1 domain family member 17
hg38_v1_chr11_+_8019193_8019293	0.0363549	FOXA3_FOXC2	ENST00000534099.5|TUB|ENSG00000166402.9|TUB bipartite transcription factor
hg38_v1_chr11_+_20022550_20022570	0.0363403	FOXA3_FOXC2	ENST00000533917.5|NAV2|ENSG00000166833.22|neuron navigator 2
hg38_v1_chr7_+_134779663_134779678	0.0363285	FOXA3_FOXC2	ENST00000361901.6|CALD1|ENSG00000122786.20|caldesmon 1
hg38_v1_chr16_+_14708944_14708944	0.0358013	FOXA3_FOXC2	ENST00000526520.5|NPIPA3|ENSG00000224712.12|nuclear pore complex interacting protein family member A3	ENST00000531598.6|NPIPA3|ENSG00000224712.12|nuclear pore complex interacting protein family member A3
hg38_v1_chr3_-_108222362_108222380	0.035258	FOXA3_FOXC2	ENST00000492106.1|IFT57|ENSG00000114446.5|intraflagellar transport 57
hg38_v1_chr10_+_35195124_35195148	0.0346076	FOXA3_FOXC2	ENST00000487763.5|CREM|ENSG00000095794.19|cAMP responsive element modulator	ENST00000473940.5|CREM|ENSG00000095794.19|cAMP responsive element modulator	ENST00000488328.5|CREM|ENSG00000095794.19|cAMP responsive element modulator	ENST00000356917.9|CREM|ENSG00000095794.19|cAMP responsive element modulator
hg38_v1_chr2_-_174395640_174395722	0.034576	FOXA3_FOXC2	ENST00000342016.8|CIR1|ENSG00000138433.16|corepressor interacting with RBPJ, CIR1
hg38_v1_chr1_-_177969907_177969919	0.0345752	FOXA3_FOXC2	ENST00000308284.10|SEC16B|ENSG00000120341.18|SEC16 homolog B, endoplasmic reticulum export factor
hg38_v1_chr2_+_46617180_46617245	0.0343922	FOXA3_FOXC2	ENST00000238892.4|CRIPT|ENSG00000119878.6|CXXC repeat containing interactor of PDZ3 domain
hg38_v1_chr1_-_43389768_43389832	0.0342563	FOXA3_FOXC2	ENST00000372455.4|MED8|ENSG00000159479.17|mediator complex subunit 8	ENST00000372457.9|MED8|ENSG00000159479.17|mediator complex subunit 8	ENST00000290663.10|MED8|ENSG00000159479.17|mediator complex subunit 8
hg38_v1_chr10_+_113709261_113709383	0.0340939	FOXA3_FOXC2	ENST00000672138.1|CASP7|ENSG00000165806.21|caspase 7	ENST00000452490.3|CASP7|ENSG00000165806.21|caspase 7
hg38_v1_chr1_+_84144260_84144341	0.0338825	FOXA3_FOXC2	ENST00000370685.7|PRKACB|ENSG00000142875.19|protein kinase cAMP-activated catalytic subunit beta
hg38_v1_chr6_-_26056460_26056479	0.0338603	FOXA3_FOXC2	ENST00000343677.4|H1-2|ENSG00000187837.4|H1.2 linker histone, cluster member
hg38_v1_chr7_-_13988863_13988891	0.033718	FOXA3_FOXC2	ENST00000405358.8|ETV1|ENSG00000006468.14|ETS variant transcription factor 1
hg38_v1_chr1_+_246566422_246566511	0.0333209	FOXA3_FOXC2	ENST00000366513.9|CNST|ENSG00000162852.14|consortin, connexin sorting protein	ENST00000366512.7|CNST|ENSG00000162852.14|consortin, connexin sorting protein
hg38_v1_chrX_-_102155790_102155995	0.032958	FOXA3_FOXC2	ENST00000543160.5|BEX5|ENSG00000184515.11|brain expressed X-linked 5	ENST00000333643.4|BEX5|ENSG00000184515.11|brain expressed X-linked 5
hg38_v1_chr9_+_68241854_68241983	0.0327843	FOXA3_FOXC2	ENST00000616550.4|CBWD3|ENSG00000196873.16|COBW domain containing 3	ENST00000618217.4|CBWD3|ENSG00000196873.16|COBW domain containing 3	ENST00000377342.9|CBWD3|ENSG00000196873.16|COBW domain containing 3	ENST00000478048.5|CBWD3|ENSG00000196873.16|COBW domain containing 3	ENST00000360171.11|CBWD3|ENSG00000196873.16|COBW domain containing 3
hg38_v1_chr18_+_63907948_63907963	0.0327212	FOXA3_FOXC2	ENST00000238508.8|SERPINB10|ENSG00000242550.6|serpin family B member 10
hg38_v1_chr12_-_71157872_71157899	0.0321623	FOXA3_FOXC2	ENST00000546561.2|TSPAN8|ENSG00000127324.9|tetraspanin 8
hg38_v1_chr2_+_113437691_113437788	0.0321215	FOXA3_FOXC2	ENST00000259199.9|CBWD2|ENSG00000136682.15|COBW domain containing 2	ENST00000416503.6|CBWD2|ENSG00000136682.15|COBW domain containing 2	ENST00000433343.6|CBWD2|ENSG00000136682.15|COBW domain containing 2
hg38_v1_chr6_+_12717660_12717671	0.0315575	FOXA3_FOXC2	ENST00000674637.1|PHACTR1|ENSG00000112137.18|phosphatase and actin regulator 1
hg38_v1_chr3_-_108222383_108222461	0.0310987	FOXA3_FOXC2	ENST00000264538.4|IFT57|ENSG00000114446.5|intraflagellar transport 57
hg38_v1_chr4_-_139302516_139302551	0.0303939	FOXA3_FOXC2	ENST00000394228.5|NDUFC1|ENSG00000109390.13|NADH:ubiquinone oxidoreductase subunit C1	ENST00000539387.5|NDUFC1|ENSG00000109390.13|NADH:ubiquinone oxidoreductase subunit C1
hg38_v1_chr1_+_40508776_40508807	0.0300215	FOXA3_FOXC2	ENST00000443729.6|EXO5|ENSG00000164002.12|exonuclease 5	ENST00000419161.2|EXO5|ENSG00000164002.12|exonuclease 5
hg38_v1_chr2_-_21044063_21044080	0.029936	FOXA3_FOXC2	ENST00000233242.5|APOB|ENSG00000084674.15|apolipoprotein B
hg38_v1_chr3_+_159273235_159273294	0.0298475	FOXA3_FOXC2	ENST00000638749.1|IQCJ-SCHIP1|ENSG00000283154.2|IQCJ-SCHIP1 readthrough
hg38_v1_chr2_+_68365274_68365292	0.0298173	FOXA3_FOXC2	ENST00000234313.8|PLEK|ENSG00000115956.10|pleckstrin
hg38_v1_chr2_+_28395511_28395743	0.0295197	FOXA3_FOXC2	ENST00000436647.1|FOSL2|ENSG00000075426.12|FOS like 2, AP-1 transcription factor subunit
hg38_v1_chr3_+_159852933_159852945	0.0288913	FOXA3_FOXC2	ENST00000482804.1|SCHIP1|ENSG00000151967.18|schwannomin interacting protein 1
hg38_v1_chr8_+_66667572_66667652	0.0286714	FOXA3_FOXC2	ENST00000520044.5|C8orf44-SGK3|ENSG00000288602.1|C8orf44-SGK3 readthrough	ENST00000521113.1|C8orf44|ENSG00000288596.2|chromosome 8 open reading frame 44	ENST00000519289.1|C8orf44-SGK3|ENSG00000288602.1|C8orf44-SGK3 readthrough	ENST00000661636.1|C8orf44|ENSG00000288596.2|chromosome 8 open reading frame 44	ENST00000521889.5|C8orf44|ENSG00000288596.2|chromosome 8 open reading frame 44
hg38_v1_chr10_-_30999469_30999526	0.0282169	FOXA3_FOXC2	ENST00000538351.6|ZNF438|ENSG00000183621.15|zinc finger protein 438
hg38_v1_chrX_-_81201886_81201935	0.0274915	FOXA3_FOXC2	ENST00000451455.1|HMGN5|ENSG00000198157.11|high mobility group nucleosome binding domain 5	ENST00000358130.7|HMGN5|ENSG00000198157.11|high mobility group nucleosome binding domain 5	ENST00000436386.5|HMGN5|ENSG00000198157.11|high mobility group nucleosome binding domain 5
hg38_v1_chr3_+_141387801_141387840	0.0268725	FOXA3_FOXC2	ENST00000514251.5|ZBTB38|ENSG00000177311.12|zinc finger and BTB domain containing 38
hg38_v1_chr13_-_48413105_48413124	0.0268599	FOXA3_FOXC2	ENST00000620633.5|LPAR6|ENSG00000139679.16|lysophosphatidic acid receptor 6
hg38_v1_chr8_-_144529048_144529118	0.0265869	FOXA3_FOXC2	ENST00000527462.1|C8orf82|ENSG00000213563.7|chromosome 8 open reading frame 82	ENST00000313465.5|C8orf82|ENSG00000213563.7|chromosome 8 open reading frame 82	ENST00000524821.6|C8orf82|ENSG00000213563.7|chromosome 8 open reading frame 82
hg38_v1_chr12_+_80099535_80099538	0.026452	FOXA3_FOXC2	ENST00000646859.1|OTOGL|ENSG00000165899.12|otogelin like	ENST00000547103.7|OTOGL|ENSG00000165899.12|otogelin like
hg38_v1_chr1_-_119811458_119811580	0.0263875	FOXA3_FOXC2	ENST00000256585.10|REG4|ENSG00000134193.15|regenerating family member 4	ENST00000354219.5|REG4|ENSG00000134193.15|regenerating family member 4	ENST00000369401.4|REG4|ENSG00000134193.15|regenerating family member 4
hg38_v1_chr12_+_57694118_57694164	0.0262911	FOXA3_FOXC2	ENST00000315970.12|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000547079.5|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000439210.6|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000389146.10|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000413095.6|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000551035.5|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000257966.12|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000435406.6|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000550372.5|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin	ENST00000389142.9|OS9|ENSG00000135506.16|OS9 endoplasmic reticulum lectin
hg38_v1_chr21_-_34615103_34615197	0.0262879	FOXA3_FOXC2	ENST00000313806.9|RCAN1|ENSG00000159200.18|regulator of calcineurin 1
hg38_v1_chr7_-_139716980_139717022	0.0255688	FOXA3_FOXC2	ENST00000342645.7|HIPK2|ENSG00000064393.16|homeodomain interacting protein kinase 2
hg38_v1_chr15_+_75043263_75043292	0.0252317	FOXA3_FOXC2	ENST00000563393.1|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase
hg38_v1_chr19_-_46654657_46654723	0.0246155	FOXA3_FOXC2	ENST00000300875.4|DACT3|ENSG00000197380.11|dishevelled binding antagonist of beta catenin 3
hg38_v1_chr1_+_207104226_207104241	0.0237335	FOXA3_FOXC2	ENST00000367070.8|C4BPA|ENSG00000123838.11|complement component 4 binding protein alpha
hg38_v1_chr12_+_59596010_59596093	0.0234346	FOXA3_FOXC2	ENST00000547379.6|SLC16A7|ENSG00000118596.12|solute carrier family 16 member 7	ENST00000552432.5|SLC16A7|ENSG00000118596.12|solute carrier family 16 member 7
hg38_v1_chr1_-_53940100_53940186	0.023363	FOXA3_FOXC2	ENST00000371376.1|HSPB11|ENSG00000081870.12|heat shock protein family B (small) member 11
hg38_v1_chr9_+_2017572_2017643	0.0233545	FOXA3_FOXC2	ENST00000637806.1|SMARCA2|ENSG00000080503.24|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg38_v1_chr3_+_155870623_155870726	0.023247	FOXA3_FOXC2	ENST00000295920.7|GMPS|ENSG00000163655.16|guanine monophosphate synthase	ENST00000496455.7|GMPS|ENSG00000163655.16|guanine monophosphate synthase
hg38_v1_chr12_+_92702843_92702974	0.0231964	FOXA3_FOXC2	ENST00000397833.3|PLEKHG7|ENSG00000187510.11|pleckstrin homology and RhoGEF domain containing G7
hg38_v1_chr3_+_14178808_14178863	0.0231922	FOXA3_FOXC2	ENST00000306024.4|LSM3|ENSG00000170860.4|LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
hg38_v1_chr1_+_113929350_113929380	0.0229198	FOXA3_FOXC2	ENST00000369559.8|HIPK1|ENSG00000163349.22|homeodomain interacting protein kinase 1	ENST00000626993.2|HIPK1|ENSG00000163349.22|homeodomain interacting protein kinase 1
hg38_v1_chr2_-_182427014_182427048	0.0228903	FOXA3_FOXC2	ENST00000409365.5|PDE1A|ENSG00000115252.18|phosphodiesterase 1A	ENST00000351439.9|PDE1A|ENSG00000115252.18|phosphodiesterase 1A
hg38_v1_chr19_-_49877279_49877361	0.0220696	FOXA3_FOXC2	ENST00000391832.7|AKT1S1|ENSG00000204673.11|AKT1 substrate 1	ENST00000344175.10|AKT1S1|ENSG00000204673.11|AKT1 substrate 1
hg38_v1_chr1_-_150697128_150697167	0.0219223	FOXA3_FOXC2	ENST00000427665.1|GOLPH3L|ENSG00000143457.11|golgi phosphoprotein 3 like	ENST00000271732.8|GOLPH3L|ENSG00000143457.11|golgi phosphoprotein 3 like
hg38_v1_chr7_+_134891400_134891421	0.0216884	FOXA3_FOXC2	ENST00000393118.6|CALD1|ENSG00000122786.20|caldesmon 1
hg38_v1_chr21_-_42366525_42366541	0.0212195	FOXA3_FOXC2	ENST00000291527.3|TFF1|ENSG00000160182.3|trefoil factor 1
hg38_v1_chr14_-_69797232_69797258	0.0211818	FOXA3_FOXC2	ENST00000216540.5|SLC10A1|ENSG00000100652.5|solute carrier family 10 member 1
hg38_v1_chr17_-_352784_352842	0.0210279	FOXA3_FOXC2	ENST00000577079.5|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000331302.12|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000618002.4|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000536489.6|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)
hg38_v1_chr4_+_164877164_164877204	0.0204948	FOXA3_FOXC2	ENST00000507152.6|APELA|ENSG00000248329.6|apelin receptor early endogenous ligand	ENST00000515275.1|APELA|ENSG00000248329.6|apelin receptor early endogenous ligand
hg38_v1_chr6_+_160702238_160702246	0.020475	FOXA3_FOXC2	ENST00000366924.6|PLG|ENSG00000122194.19|plasminogen	ENST00000308192.14|PLG|ENSG00000122194.19|plasminogen	ENST00000418964.1|PLG|ENSG00000122194.19|plasminogen
hg38_v1_chrX_-_41665766_41665857	0.0204457	FOXA3_FOXC2	ENST00000643043.2|CASK|ENSG00000147044.23|calcium/calmodulin dependent serine protein kinase	ENST00000486402.1|CASK|ENSG00000147044.23|calcium/calmodulin dependent serine protein kinase	ENST00000646087.2|CASK|ENSG00000147044.23|calcium/calmodulin dependent serine protein kinase
hg38_v1_chr1_+_113929304_113929338	0.0203787	FOXA3_FOXC2	ENST00000426820.7|HIPK1|ENSG00000163349.22|homeodomain interacting protein kinase 1
hg38_v1_chr1_+_61082553_61082627	0.0202762	FOXA3_FOXC2	ENST00000403491.8|NFIA|ENSG00000162599.17|nuclear factor I A	ENST00000371187.7|NFIA|ENSG00000162599.17|nuclear factor I A
hg38_v1_chr1_-_154178174_154178214	0.0200783	FOXA3_FOXC2	ENST00000302206.9|TPM3|ENSG00000143549.21|tropomyosin 3
hg38_v1_chrX_-_48003949_48004013	0.0198061	FOXA3_FOXC2	ENST00000396965.5|ZNF182|ENSG00000147118.12|zinc finger protein 182	ENST00000376943.8|ZNF182|ENSG00000147118.12|zinc finger protein 182
hg38_v1_chr6_-_112254647_112254729	0.0197678	FOXA3_FOXC2	ENST00000455073.1|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000522006.5|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000519932.5|LAMA4|ENSG00000112769.20|laminin subunit alpha 4
hg38_v1_chrX_+_10156960_10156992	0.0197462	FOXA3_FOXC2	ENST00000380833.9|CLCN4|ENSG00000073464.13|chloride voltage-gated channel 4
hg38_v1_chr12_+_92702983_92703028	0.0197303	FOXA3_FOXC2	ENST00000344636.6|PLEKHG7|ENSG00000187510.11|pleckstrin homology and RhoGEF domain containing G7	ENST00000544406.2|PLEKHG7|ENSG00000187510.11|pleckstrin homology and RhoGEF domain containing G7
hg38_v1_chr9_+_65675834_65675938	0.0195503	FOXA3_FOXC2	ENST00000377392.9|CBWD5|ENSG00000147996.17|COBW domain containing 5	ENST00000377384.5|CBWD5|ENSG00000147996.17|COBW domain containing 5	ENST00000430059.6|CBWD5|ENSG00000147996.17|COBW domain containing 5	ENST00000429800.6|CBWD5|ENSG00000147996.17|COBW domain containing 5	ENST00000382405.8|CBWD5|ENSG00000147996.17|COBW domain containing 5	ENST00000377395.8|CBWD5|ENSG00000147996.17|COBW domain containing 5
hg38_v1_chr6_-_122471774_122471825	0.0189295	FOXA3_FOXC2	ENST00000339697.5|SERINC1|ENSG00000111897.7|serine incorporator 1
hg38_v1_chr11_-_57390636_57390656	0.0187013	FOXA3_FOXC2	ENST00000525955.1|PRG2|ENSG00000186652.10|proteoglycan 2, pro eosinophil major basic protein	ENST00000533605.5|PRG2|ENSG00000186652.10|proteoglycan 2, pro eosinophil major basic protein	ENST00000311862.10|PRG2|ENSG00000186652.10|proteoglycan 2, pro eosinophil major basic protein
hg38_v1_chr15_+_96325935_96325954	0.0186162	FOXA3_FOXC2	ENST00000421109.6|NR2F2|ENSG00000185551.15|nuclear receptor subfamily 2 group F member 2
hg38_v1_chr14_-_23057506_23057529	0.0185013	FOXA3_FOXC2	ENST00000487137.7|CDH24|ENSG00000139880.20|cadherin 24
hg38_v1_chr8_+_54616078_54616114	0.0184257	FOXA3_FOXC2	ENST00000220676.2|RP1|ENSG00000104237.11|RP1 axonemal microtubule associated
hg38_v1_chr14_-_23057530_23057557	0.0183947	FOXA3_FOXC2	ENST00000397359.7|CDH24|ENSG00000139880.20|cadherin 24	ENST00000610348.1|CDH24|ENSG00000139880.20|cadherin 24
hg38_v1_chr5_+_138338256_138338272	0.0183633	FOXA3_FOXC2	ENST00000513056.5|FAM53C|ENSG00000120709.11|family with sequence similarity 53 member C	ENST00000239906.10|FAM53C|ENSG00000120709.11|family with sequence similarity 53 member C	ENST00000511276.1|FAM53C|ENSG00000120709.11|family with sequence similarity 53 member C
hg38_v1_chr6_-_25830557_25830616	0.0182481	FOXA3_FOXC2	ENST00000468082.1|SLC17A1|ENSG00000124568.12|solute carrier family 17 member 1
hg38_v1_chr10_-_116273009_116273215	0.01807	FOXA3_FOXC2	ENST00000439649.8|GFRA1|ENSG00000151892.16|GDNF family receptor alpha 1	ENST00000369234.5|GFRA1|ENSG00000151892.16|GDNF family receptor alpha 1	ENST00000682194.1|GFRA1|ENSG00000151892.16|GDNF family receptor alpha 1	ENST00000355422.11|GFRA1|ENSG00000151892.16|GDNF family receptor alpha 1
hg38_v1_chr11_+_20363685_20363775	0.017438	FOXA3_FOXC2	ENST00000530266.5|HTATIP2|ENSG00000109854.14|HIV-1 Tat interactive protein 2	ENST00000451739.7|HTATIP2|ENSG00000109854.14|HIV-1 Tat interactive protein 2	ENST00000421577.6|HTATIP2|ENSG00000109854.14|HIV-1 Tat interactive protein 2	ENST00000443524.6|HTATIP2|ENSG00000109854.14|HIV-1 Tat interactive protein 2	ENST00000419348.6|HTATIP2|ENSG00000109854.14|HIV-1 Tat interactive protein 2
hg38_v1_chr19_-_45584769_45584809	0.0173876	FOXA3_FOXC2	ENST00000263275.5|OPA3|ENSG00000125741.5|outer mitochondrial membrane lipid metabolism regulator OPA3
hg38_v1_chr14_-_25010604_25010640	0.0171688	FOXA3_FOXC2	ENST00000550887.5|STXBP6|ENSG00000168952.15|syntaxin binding protein 6
hg38_v1_chr20_+_33283205_33283223	0.017028	FOXA3_FOXC2	ENST00000253354.2|BPIFB1|ENSG00000125999.11|BPI fold containing family B member 1
hg38_v1_chr12_-_49187369_49187405	0.0166505	FOXA3_FOXC2	ENST00000547939.6|TUBA1A|ENSG00000167552.15|tubulin alpha 1a
hg38_v1_chr13_-_38990824_38990836	0.0166307	FOXA3_FOXC2	ENST00000379631.9|STOML3|ENSG00000133115.12|stomatin like 3
hg38_v1_chr6_-_159045010_159045034	0.016439	FOXA3_FOXC2	ENST00000338313.5|TAGAP|ENSG00000164691.18|T cell activation RhoGTPase activating protein
hg38_v1_chr1_-_169586539_169586588	0.0160706	FOXA3_FOXC2	ENST00000367796.3|F5|ENSG00000198734.12|coagulation factor V
hg38_v1_chr8_+_119067239_119067261	0.0159844	FOXA3_FOXC2	ENST00000332843.3|COLEC10|ENSG00000184374.3|collectin subfamily member 10
hg38_v1_chr6_+_30136130_30136146	0.015809	FOXA3_FOXC2	ENST00000396581.6|TRIM40|ENSG00000204614.9|tripartite motif containing 40
hg38_v1_chr4_-_69495861_69495882	0.0155045	FOXA3_FOXC2	ENST00000512583.5|UGT2B4|ENSG00000156096.14|UDP glucuronosyltransferase family 2 member B4
hg38_v1_chr17_-_46192767_46192894	0.0153502	FOXA3_FOXC2	ENST00000262419.10|KANSL1|ENSG00000120071.15|KAT8 regulatory NSL complex subunit 1
hg38_v1_chr1_-_177970213_177970260	0.0149535	FOXA3_FOXC2	ENST00000464631.6|SEC16B|ENSG00000120341.18|SEC16 homolog B, endoplasmic reticulum export factor
hg38_v1_chr10_-_45535346_45535376	0.0148222	FOXA3_FOXC2	ENST00000453424.7|MARCHF8|ENSG00000165406.16|membrane associated ring-CH-type finger 8	ENST00000395769.6|MARCHF8|ENSG00000165406.16|membrane associated ring-CH-type finger 8
hg38_v1_chr22_-_30471986_30472017	0.01435	FOXA3_FOXC2	ENST00000401751.5|SEC14L3|ENSG00000100012.12|SEC14 like lipid binding 3	ENST00000402286.5|SEC14L3|ENSG00000100012.12|SEC14 like lipid binding 3	ENST00000403066.5|SEC14L3|ENSG00000100012.12|SEC14 like lipid binding 3	ENST00000215812.9|SEC14L3|ENSG00000100012.12|SEC14 like lipid binding 3
hg38_v1_chr18_+_3449620_3449651	0.0143117	FOXA3_FOXC2	ENST00000405385.7|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr11_-_6440980_6441024	0.0142702	FOXA3_FOXC2	ENST00000265983.8|HPX|ENSG00000110169.11|hemopexin	ENST00000615166.1|HPX|ENSG00000110169.11|hemopexin
hg38_v1_chr6_+_168017873_168017873	0.0141973	FOXA3_FOXC2	ENST00000351261.4|KIF25|ENSG00000125337.20|kinesin family member 25	ENST00000354419.6|KIF25|ENSG00000125337.20|kinesin family member 25
hg38_v1_chr5_+_141408032_141408203	0.0139993	FOXA3_FOXC2	ENST00000520790.1|PCDHGB6|ENSG00000253305.2|protocadherin gamma subfamily B, 6
hg38_v1_chr1_-_120100688_120100688	0.0138695	FOXA3_FOXC2	ENST00000652264.1|NOTCH2|ENSG00000134250.20|notch receptor 2
hg38_v1_chr4_-_69495897_69495914	0.0138601	FOXA3_FOXC2	ENST00000305107.7|UGT2B4|ENSG00000156096.14|UDP glucuronosyltransferase family 2 member B4	ENST00000639621.1|UGT2B4|ENSG00000156096.14|UDP glucuronosyltransferase family 2 member B4
hg38_v1_chr4_-_139302460_139302513	0.013796	FOXA3_FOXC2	ENST00000394223.2|NDUFC1|ENSG00000109390.13|NADH:ubiquinone oxidoreductase subunit C1	ENST00000676245.1|NDUFC1|ENSG00000109390.13|NADH:ubiquinone oxidoreductase subunit C1
hg38_v1_chr12_-_124422523_124422565	0.0134863	FOXA3_FOXC2	ENST00000404121.6|NCOR2|ENSG00000196498.13|nuclear receptor corepressor 2	ENST00000356219.7|NCOR2|ENSG00000196498.13|nuclear receptor corepressor 2
hg38_v1_chr3_-_71064964_71064983	0.0133704	FOXA3_FOXC2	ENST00000650387.1|FOXP1|ENSG00000114861.23|forkhead box P1
hg38_v1_chr3_-_71064915_71064963	0.0133027	FOXA3_FOXC2	ENST00000614176.5|FOXP1|ENSG00000114861.23|forkhead box P1	ENST00000485326.7|FOXP1|ENSG00000114861.23|forkhead box P1
hg38_v1_chr12_+_21372899_21372928	0.0132133	FOXA3_FOXC2	ENST00000240652.8|IAPP|ENSG00000121351.8|islet amyloid polypeptide	ENST00000542023.1|IAPP|ENSG00000121351.8|islet amyloid polypeptide	ENST00000537593.1|IAPP|ENSG00000121351.8|islet amyloid polypeptide
hg38_v1_chr3_+_136930469_136930519	0.0131296	FOXA3_FOXC2	ENST00000469404.1|NCK1|ENSG00000158092.7|NCK adaptor protein 1	ENST00000467911.1|NCK1|ENSG00000158092.7|NCK adaptor protein 1
hg38_v1_chr2_+_73892967_73893015	0.013037	FOXA3_FOXC2	ENST00000409731.7|ACTG2|ENSG00000163017.14|actin gamma 2, smooth muscle	ENST00000409918.5|ACTG2|ENSG00000163017.14|actin gamma 2, smooth muscle	ENST00000442912.5|ACTG2|ENSG00000163017.14|actin gamma 2, smooth muscle	ENST00000345517.8|ACTG2|ENSG00000163017.14|actin gamma 2, smooth muscle	ENST00000409624.1|ACTG2|ENSG00000163017.14|actin gamma 2, smooth muscle
hg38_v1_chr13_-_38990856_38990866	0.0129484	FOXA3_FOXC2	ENST00000423210.1|STOML3|ENSG00000133115.12|stomatin like 3
hg38_v1_chr1_-_169586471_169586492	0.0128193	FOXA3_FOXC2	ENST00000367797.9|F5|ENSG00000198734.12|coagulation factor V
hg38_v1_chr6_-_112254555_112254578	0.0126844	FOXA3_FOXC2	ENST00000230538.12|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000389463.9|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000368638.5|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000431543.6|LAMA4|ENSG00000112769.20|laminin subunit alpha 4	ENST00000453937.2|LAMA4|ENSG00000112769.20|laminin subunit alpha 4
hg38_v1_chr20_+_45407207_45407240	0.0126786	FOXA3_FOXC2	ENST00000372712.6|DBNDD2|ENSG00000244274.9|dysbindin domain containing 2
hg38_v1_chr7_+_106865474_106865486	0.0123365	FOXA3_FOXC2	ENST00000359195.3|PIK3CG|ENSG00000105851.11|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
hg38_v1_chr3_+_172040554_172040569	0.0119782	FOXA3_FOXC2	ENST00000336824.8|FNDC3B|ENSG00000075420.13|fibronectin type III domain containing 3B	ENST00000423424.5|FNDC3B|ENSG00000075420.13|fibronectin type III domain containing 3B
hg38_v1_chr1_-_151459169_151459193	0.0119737	FOXA3_FOXC2	ENST00000368863.6|POGZ|ENSG00000143442.22|pogo transposable element derived with ZNF domain	ENST00000409503.5|POGZ|ENSG00000143442.22|pogo transposable element derived with ZNF domain	ENST00000491586.5|POGZ|ENSG00000143442.22|pogo transposable element derived with ZNF domain	ENST00000533351.5|POGZ|ENSG00000143442.22|pogo transposable element derived with ZNF domain
hg38_v1_chr1_+_23691742_23691813	0.0118933	FOXA3_FOXC2	ENST00000374550.8|RPL11|ENSG00000142676.14|ribosomal protein L11	ENST00000643754.2|RPL11|ENSG00000142676.14|ribosomal protein L11
hg38_v1_chr2_-_171066936_171066977	0.0118495	FOXA3_FOXC2	ENST00000453628.1|TLK1|ENSG00000198586.14|tousled like kinase 1	ENST00000434911.6|TLK1|ENSG00000198586.14|tousled like kinase 1
hg38_v1_chr1_-_152360004_152360008	0.0117555	FOXA3_FOXC2	ENST00000388718.5|FLG2|ENSG00000143520.6|filaggrin family member 2
hg38_v1_chr4_-_88284747_88284769	0.0113024	FOXA3_FOXC2	ENST00000514204.1|PPM1K|ENSG00000163644.15|protein phosphatase, Mg2+/Mn2+ dependent 1K
hg38_v1_chr14_+_74084947_74084978	0.0111256	FOXA3_FOXC2	ENST00000674221.1|LIN52|ENSG00000205659.11|lin-52 DREAM MuvB core complex component	ENST00000554938.2|LIN52|ENSG00000205659.11|lin-52 DREAM MuvB core complex component
hg38_v1_chr19_-_45584810_45584842	0.0108617	FOXA3_FOXC2	ENST00000323060.3|OPA3|ENSG00000125741.5|outer mitochondrial membrane lipid metabolism regulator OPA3
hg38_v1_chr2_+_219178266_219178289	0.0107486	FOXA3_FOXC2	ENST00000430297.7|RETREG2|ENSG00000144567.11|reticulophagy regulator family member 2
hg38_v1_chrX_+_66162663_66162678	0.0106144	FOXA3_FOXC2	ENST00000519389.6|HEPH|ENSG00000089472.17|hephaestin
hg38_v1_chr22_+_25111810_25111870	0.0105797	FOXA3_FOXC2	ENST00000637069.1|KIAA1671|ENSG00000197077.14|KIAA1671
hg38_v1_chr17_-_7043906_7043934	0.0105782	FOXA3_FOXC2	ENST00000308009.5|SLC16A11|ENSG00000174326.14|solute carrier family 16 member 11	ENST00000447225.1|SLC16A11|ENSG00000174326.14|solute carrier family 16 member 11
hg38_v1_chr20_+_11917859_11917905	0.0105144	FOXA3_FOXC2	ENST00000618296.4|BTBD3|ENSG00000132640.15|BTB domain containing 3	ENST00000378226.7|BTBD3|ENSG00000132640.15|BTB domain containing 3
hg38_v1_chr17_-_7044091_7044094	0.01037	FOXA3_FOXC2	ENST00000574600.3|SLC16A11|ENSG00000174326.14|solute carrier family 16 member 11	ENST00000662352.3|SLC16A11|ENSG00000174326.14|solute carrier family 16 member 11	ENST00000673828.2|SLC16A11|ENSG00000174326.14|solute carrier family 16 member 11
hg38_v1_chr17_-_59151794_59151837	0.0103521	FOXA3_FOXC2	ENST00000584089.1|SKA2|ENSG00000182628.13|spindle and kinetochore associated complex subunit 2
hg38_v1_chr11_+_126327863_126327888	0.0100876	FOXA3_FOXC2	ENST00000648516.1|DCPS|ENSG00000110063.10|decapping enzyme, scavenger
hg38_v1_chr7_-_122144231_122144296	0.0100774	FOXA3_FOXC2	ENST00000679511.1|AASS|ENSG00000008311.16|aminoadipate-semialdehyde synthase	ENST00000417368.7|AASS|ENSG00000008311.16|aminoadipate-semialdehyde synthase	ENST00000473553.5|AASS|ENSG00000008311.16|aminoadipate-semialdehyde synthase
hg38_v1_chr6_+_112054075_112054220	0.00994287	FOXA3_FOXC2	ENST00000230529.9|CCN6|ENSG00000112761.21|cellular communication network factor 6	ENST00000604763.5|CCN6|ENSG00000112761.21|cellular communication network factor 6	ENST00000368666.7|CCN6|ENSG00000112761.21|cellular communication network factor 6	ENST00000674325.1|CCN6|ENSG00000112761.21|cellular communication network factor 6	ENST00000483439.1|CCN6|ENSG00000112761.21|cellular communication network factor 6	ENST00000409166.5|CCN6|ENSG00000112761.21|cellular communication network factor 6
hg38_v1_chr15_+_75724034_75724051	0.00992459	FOXA3_FOXC2	ENST00000332145.3|ODF3L1|ENSG00000182950.3|outer dense fiber of sperm tails 3 like 1
hg38_v1_chr1_-_246193727_246193741	0.0094591	FOXA3_FOXC2	ENST00000391836.3|SMYD3|ENSG00000185420.19|SET and MYND domain containing 3
hg38_v1_chr11_+_102112445_102112514	0.00940822	FOXA3_FOXC2	ENST00000524575.5|YAP1|ENSG00000137693.14|Yes1 associated transcriptional regulator
hg38_v1_chr3_-_45915698_45915731	0.00912274	FOXA3_FOXC2	ENST00000539217.5|LZTFL1|ENSG00000163818.19|leucine zipper transcription factor like 1
hg38_v1_chr1_+_12746192_12746251	0.00903789	FOXA3_FOXC2	ENST00000614859.5|C1orf158|ENSG00000157330.10|chromosome 1 open reading frame 158
hg38_v1_chr1_-_151459471_151459511	0.00902896	FOXA3_FOXC2	ENST00000271715.7|POGZ|ENSG00000143442.22|pogo transposable element derived with ZNF domain
hg38_v1_chr9_-_4300049_4300120	0.00883529	FOXA3_FOXC2	ENST00000381971.8|GLIS3|ENSG00000107249.24|GLIS family zinc finger 3
hg38_v1_chr1_+_18630839_18630881	0.00874772	FOXA3_FOXC2	ENST00000420770.7|PAX7|ENSG00000009709.12|paired box 7
hg38_v1_chr3_+_136022734_136022759	0.00855641	FOXA3_FOXC2	ENST00000334546.6|PPP2R3A|ENSG00000073711.11|protein phosphatase 2 regulatory subunit B''alpha
hg38_v1_chr15_+_70892809_70892876	0.00829914	FOXA3_FOXC2	ENST00000260382.10|LRRC49|ENSG00000137821.12|leucine rich repeat containing 49	ENST00000560755.5|LRRC49|ENSG00000137821.12|leucine rich repeat containing 49
hg38_v1_chr15_-_50119215_50119240	0.00828579	FOXA3_FOXC2	ENST00000284509.11|ATP8B4|ENSG00000104043.15|ATPase phospholipid transporting 8B4 (putative)	ENST00000674213.1|ATP8B4|ENSG00000104043.15|ATPase phospholipid transporting 8B4 (putative)
hg38_v1_chr11_-_41459592_41459773	0.00812644	FOXA3_FOXC2	ENST00000528697.6|LRRC4C|ENSG00000148948.8|leucine rich repeat containing 4C	ENST00000530763.5|LRRC4C|ENSG00000148948.8|leucine rich repeat containing 4C
hg38_v1_chr5_+_136132772_136132936	0.00793859	FOXA3_FOXC2	ENST00000545279.6|SMAD5|ENSG00000113658.18|SMAD family member 5	ENST00000507118.5|SMAD5|ENSG00000113658.18|SMAD family member 5	ENST00000511116.5|SMAD5|ENSG00000113658.18|SMAD family member 5	ENST00000545620.5|SMAD5|ENSG00000113658.18|SMAD family member 5	ENST00000509297.6|SMAD5|ENSG00000113658.18|SMAD family member 5
hg38_v1_chr19_+_13795434_13795460	0.00779925	FOXA3_FOXC2	ENST00000254323.6|ZSWIM4|ENSG00000132003.9|zinc finger SWIM-type containing 4
hg38_v1_chr12_+_93677556_93677717	0.00761948	FOXA3_FOXC2	ENST00000542893.2|CRADD|ENSG00000169372.13|CASP2 and RIPK1 domain containing adaptor with death domain
hg38_v1_chr12_+_120302316_120302321	0.00748405	FOXA3_FOXC2	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg38_v1_chr10_+_122560639_122560665	0.00744589	FOXA3_FOXC2	ENST00000344338.7|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000330163.8|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000652446.2|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000666315.1|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000368955.7|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000368909.7|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000368956.6|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000619379.1|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1
hg38_v1_chr5_+_148394712_148394787	0.00735085	FOXA3_FOXC2	ENST00000513826.1|FBXO38|ENSG00000145868.17|F-box protein 38
hg38_v1_chr2_+_167248638_167248682	0.00733219	FOXA3_FOXC2	ENST00000295237.10|XIRP2|ENSG00000163092.21|xin actin binding repeat containing 2
hg38_v1_chr17_-_41047267_41047316	0.00726311	FOXA3_FOXC2	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg38_v1_chr7_-_108003122_108003214	0.00711328	FOXA3_FOXC2	ENST00000393559.2|LAMB1|ENSG00000091136.15|laminin subunit beta 1	ENST00000222399.11|LAMB1|ENSG00000091136.15|laminin subunit beta 1	ENST00000676777.1|LAMB1|ENSG00000091136.15|laminin subunit beta 1	ENST00000439976.6|LAMB1|ENSG00000091136.15|laminin subunit beta 1	ENST00000393560.5|LAMB1|ENSG00000091136.15|laminin subunit beta 1	ENST00000677793.1|LAMB1|ENSG00000091136.15|laminin subunit beta 1	ENST00000679244.1|LAMB1|ENSG00000091136.15|laminin subunit beta 1
hg38_v1_chr6_-_24666591_24666732	0.00706835	FOXA3_FOXC2	ENST00000341060.3|TDP2|ENSG00000111802.14|tyrosyl-DNA phosphodiesterase 2
hg38_v1_chr10_-_69416912_69416923	0.00689332	FOXA3_FOXC2	ENST00000373306.5|TACR2|ENSG00000075073.15|tachykinin receptor 2
hg38_v1_chr14_-_24195334_24195484	0.00675395	FOXA3_FOXC2	ENST00000530563.1|TM9SF1|ENSG00000100926.15|transmembrane 9 superfamily member 1	ENST00000528895.5|TM9SF1|ENSG00000100926.15|transmembrane 9 superfamily member 1	ENST00000528669.5|TM9SF1|ENSG00000100926.15|transmembrane 9 superfamily member 1	ENST00000532632.1|TM9SF1|ENSG00000100926.15|transmembrane 9 superfamily member 1	ENST00000261789.9|TM9SF1|ENSG00000100926.15|transmembrane 9 superfamily member 1
hg38_v1_chr1_+_154567820_154567851	0.00640191	FOXA3_FOXC2	ENST00000637900.1|CHRNB2|ENSG00000160716.6|cholinergic receptor nicotinic beta 2 subunit
hg38_v1_chr12_+_93677352_93677399	0.00603871	FOXA3_FOXC2	ENST00000552983.5|CRADD|ENSG00000169372.13|CASP2 and RIPK1 domain containing adaptor with death domain	ENST00000332896.8|CRADD|ENSG00000169372.13|CASP2 and RIPK1 domain containing adaptor with death domain	ENST00000552033.5|CRADD|ENSG00000169372.13|CASP2 and RIPK1 domain containing adaptor with death domain	ENST00000548483.5|CRADD|ENSG00000169372.13|CASP2 and RIPK1 domain containing adaptor with death domain
hg38_v1_chr1_+_43389874_43389886	0.00595642	FOXA3_FOXC2	ENST00000372450.8|SZT2|ENSG00000198198.17|SZT2 subunit of KICSTOR complex
hg38_v1_chrX_-_15384402_15384418	0.00577634	FOXA3_FOXC2	ENST00000297904.4|VEGFD|ENSG00000165197.5|vascular endothelial growth factor D
hg38_v1_chr5_-_150086511_150086569	0.00562431	FOXA3_FOXC2	ENST00000675795.1|CSF1R|ENSG00000182578.14|colony stimulating factor 1 receptor
hg38_v1_chr2_+_168802610_168802647	0.00559371	FOXA3_FOXC2	ENST00000397206.6|NOSTRIN|ENSG00000163072.16|nitric oxide synthase trafficking	ENST00000317647.12|NOSTRIN|ENSG00000163072.16|nitric oxide synthase trafficking	ENST00000397209.6|NOSTRIN|ENSG00000163072.16|nitric oxide synthase trafficking
hg38_v1_chr16_-_48610150_48610230	0.00522309	FOXA3_FOXC2	ENST00000262384.4|N4BP1|ENSG00000102921.8|NEDD4 binding protein 1
hg38_v1_chr1_+_43389889_43389942	0.00512339	FOXA3_FOXC2	ENST00000562955.2|SZT2|ENSG00000198198.17|SZT2 subunit of KICSTOR complex	ENST00000634258.3|SZT2|ENSG00000198198.17|SZT2 subunit of KICSTOR complex
hg38_v1_chr12_-_102197827_102197838	0.0050079	FOXA3_FOXC2	ENST00000329406.5|PMCH|ENSG00000183395.5|pro-melanin concentrating hormone
hg38_v1_chr2_-_36966503_36966616	0.00491399	FOXA3_FOXC2	ENST00000263918.9|STRN|ENSG00000115808.12|striatin
hg38_v1_chr2_-_46617020_46617070	0.00468963	FOXA3_FOXC2	ENST00000474980.1|PIGF|ENSG00000151665.13|phosphatidylinositol glycan anchor biosynthesis class F	ENST00000281382.11|PIGF|ENSG00000151665.13|phosphatidylinositol glycan anchor biosynthesis class F	ENST00000306465.8|PIGF|ENSG00000151665.13|phosphatidylinositol glycan anchor biosynthesis class F
hg38_v1_chrX_+_26138343_26138343	0.00456408	FOXA3_FOXC2	ENST00000325250.2|MAGEB18|ENSG00000176774.6|MAGE family member B18
hg38_v1_chr5_+_96662969_96663009	0.00439429	FOXA3_FOXC2	ENST00000514845.5|CAST|ENSG00000153113.24|calpastatin	ENST00000675663.1|CAST|ENSG00000153113.24|calpastatin
hg38_v1_chr22_-_21227637_21227637	0.00431087	FOXA3_FOXC2	ENST00000401924.5|GGT2|ENSG00000133475.17|gamma-glutamyltransferase 2
hg38_v1_chr7_+_28412511_28412536	0.00393045	FOXA3_FOXC2	ENST00000357727.7|CREB5|ENSG00000146592.17|cAMP responsive element binding protein 5
hg38_v1_chr7_+_88759690_88759716	0.00350423	FOXA3_FOXC2	ENST00000333190.5|ZNF804B|ENSG00000182348.7|zinc finger protein 804B
hg38_v1_chr17_-_41315706_41315711	0.00349964	FOXA3_FOXC2	ENST00000334202.5|KRTAP17-1|ENSG00000186860.5|keratin associated protein 17-1
hg38_v1_chr2_+_168802563_168802604	0.00344408	FOXA3_FOXC2	ENST00000445023.6|NOSTRIN|ENSG00000163072.16|nitric oxide synthase trafficking
hg38_v1_chr5_+_32531786_32531825	0.00313509	FOXA3_FOXC2	ENST00000512913.5|SUB1|ENSG00000113387.12|SUB1 regulator of transcription
hg38_v1_chr10_+_122560679_122560699	0.00268031	FOXA3_FOXC2	ENST00000657942.1|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1
hg38_v1_chr2_-_178702479_178702532	0.00260814	FOXA3_FOXC2	ENST00000414766.5|TTN|ENSG00000155657.28|titin
hg38_v1_chr4_-_134201773_134201799	0.00256164	FOXA3_FOXC2	ENST00000421491.4|PABPC4L|ENSG00000254535.4|poly(A) binding protein cytoplasmic 4 like
hg38_v1_chr9_-_72953047_72953061	0.00180581	FOXA3_FOXC2	ENST00000297785.8|ALDH1A1|ENSG00000165092.13|aldehyde dehydrogenase 1 family member A1	ENST00000376939.5|ALDH1A1|ENSG00000165092.13|aldehyde dehydrogenase 1 family member A1
hg38_v1_chr2_+_135586250_135586327	0.00169484	FOXA3_FOXC2	ENST00000410054.5|R3HDM1|ENSG00000048991.17|R3H domain containing 1	ENST00000628915.2|R3HDM1|ENSG00000048991.17|R3H domain containing 1
hg38_v1_chr7_+_106865263_106865344	0.00166722	FOXA3_FOXC2	ENST00000440650.6|PIK3CG|ENSG00000105851.11|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma	ENST00000496166.6|PIK3CG|ENSG00000105851.11|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma	ENST00000473541.5|PIK3CG|ENSG00000105851.11|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
hg38_v1_chr3_+_148827800_148827822	0.00151143	FOXA3_FOXC2	ENST00000282957.9|CPB1|ENSG00000153002.12|carboxypeptidase B1	ENST00000468341.1|CPB1|ENSG00000153002.12|carboxypeptidase B1
hg38_v1_chr6_-_159044980_159044998	0.00133879	FOXA3_FOXC2	ENST00000367066.8|TAGAP|ENSG00000164691.18|T cell activation RhoGTPase activating protein
hg38_v1_chr10_+_122560751_122560771	0.00130558	FOXA3_FOXC2	ENST00000338354.10|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000664692.1|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000653442.1|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1	ENST00000664974.1|DMBT1|ENSG00000187908.20|deleted in malignant brain tumors 1
hg38_v1_chr6_+_44387686_44387730	0.000938294	FOXA3_FOXC2	ENST00000371477.4|CDC5L|ENSG00000096401.8|cell division cycle 5 like
hg38_v1_chr17_-_40984297_40984328	0.000810467	FOXA3_FOXC2	ENST00000377755.9|KRT40|ENSG00000204889.11|keratin 40
hg38_v1_chr7_+_114414809_114414822	0.000518877	FOXA3_FOXC2	ENST00000350908.9|FOXP2|ENSG00000128573.26|forkhead box P2
hg38_v1_chr16_+_20763990_20764031	0.000469625	FOXA3_FOXC2	ENST00000289416.10|ACSM3|ENSG00000005187.12|acyl-CoA synthetase medium chain family member 3
hg38_v1_chr6_+_146027662_146027782	0.000343349	FOXA3_FOXC2	ENST00000492807.6|GRM1|ENSG00000152822.14|glutamate metabotropic receptor 1	ENST00000361719.6|GRM1|ENSG00000152822.14|glutamate metabotropic receptor 1
