avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Name	miRBASE accession
hsa-miR-490-3p Links miRBase	MIMAT0002806

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_-_190120881 Show fit	0.06	ENST00000319332.10	P3H2 Links Ensembl NCBI GeneCards UniProt Show fit	prolyl 3-hydroxylase 2
chr11_-_115504389 Show fit	0.03	ENST00000545380.5 ENST00000452722.7 ENST00000331581.11 ENST00000537058.5 ENST00000536727.5 ENST00000542447.6	CADM1 Links Ensembl NCBI GeneCards UniProt Show fit	cell adhesion molecule 1
chr7_-_140176970 Show fit	0.02	ENST00000397560.7	KDM7A Links Ensembl NCBI GeneCards UniProt Show fit	lysine demethylase 7A
chrX_-_130268883 Show fit	0.02	ENST00000447817.1 ENST00000370978.9	ZNF280C Links Ensembl NCBI GeneCards UniProt Show fit	zinc finger protein 280C
chr11_+_76860859 Show fit	0.01	ENST00000679754.1 ENST00000534206.5 ENST00000680583.1 ENST00000532485.6 ENST00000526597.5 ENST00000533873.1	ACER3 Links Ensembl NCBI GeneCards UniProt Show fit	alkaline ceramidase 3
chrX_+_123961304 Show fit	0.01	ENST00000371160.5 ENST00000435103.5	STAG2 Links Ensembl NCBI GeneCards UniProt Show fit	stromal antigen 2
chr6_-_90296824 Show fit	0.01	ENST00000257749.9	BACH2 Links Ensembl NCBI GeneCards UniProt Show fit	BTB domain and CNC homolog 2
chrX_-_110795765 Show fit	0.01	ENST00000372045.5 ENST00000394797.8 ENST00000372042.6 ENST00000482160.5 ENST00000444321.2	CHRDL1 Links Ensembl NCBI GeneCards UniProt Show fit	chordin like 1
chr2_+_170715317 Show fit	0.01	ENST00000375281.4	SP5 Links Ensembl NCBI GeneCards UniProt Show fit	Sp5 transcription factor
chr13_-_40666600 Show fit	0.01	ENST00000379561.6	FOXO1 Links Ensembl NCBI GeneCards UniProt Show fit	forkhead box O1
chr19_+_34428353 Show fit	0.01	ENST00000590048.6 ENST00000246548.9	UBA2 Links Ensembl NCBI GeneCards UniProt Show fit	ubiquitin like modifier activating enzyme 2
chr7_+_77537258 Show fit	0.01	ENST00000248594.11	PTPN12 Links Ensembl NCBI GeneCards UniProt Show fit	protein tyrosine phosphatase non-receptor type 12
chr17_-_50707855 Show fit	0.01	ENST00000285243.7	ANKRD40 Links Ensembl NCBI GeneCards UniProt Show fit	ankyrin repeat domain 40
chr8_+_93754879 Show fit	0.00	ENST00000453906.6 ENST00000683362.1 ENST00000682036.1 ENST00000453321.8 ENST00000409623.8 ENST00000520680.2 ENST00000521517.6 ENST00000452276.6	TMEM67 Links Ensembl NCBI GeneCards UniProt Show fit	transmembrane protein 67
chr19_+_4007714 Show fit	0.00	ENST00000262971.3	PIAS4 Links Ensembl NCBI GeneCards UniProt Show fit	protein inhibitor of activated STAT 4
chr11_-_93741479 Show fit	0.00	ENST00000448108.7 ENST00000532455.1	TAF1D Links Ensembl NCBI GeneCards UniProt Show fit	TATA-box binding protein associated factor, RNA polymerase I subunit D
chr19_+_42284483 Show fit	0.00	ENST00000575354.6	CIC Links Ensembl NCBI GeneCards UniProt Show fit	capicua transcriptional repressor
chr8_-_102864155 Show fit	0.00	ENST00000682725.1 ENST00000337198.10 ENST00000681985.1 ENST00000684566.1 ENST00000683787.1 ENST00000682014.1 ENST00000682969.1 ENST00000684721.1 ENST00000347770.8	AZIN1 Links Ensembl NCBI GeneCards UniProt Show fit	antizyme inhibitor 1
chr9_-_38069220 Show fit	0.00	ENST00000377707.4	SHB Links Ensembl NCBI GeneCards UniProt Show fit	SH2 domain containing adaptor protein B
chr18_-_36067524 Show fit	0.00	ENST00000590898.5 ENST00000357384.8 ENST00000399022.9 ENST00000588737.5	RPRD1A Links Ensembl NCBI GeneCards UniProt Show fit	regulation of nuclear pre-mRNA domain containing 1A
chr1_-_246931326 Show fit	0.00	ENST00000366508.5 ENST00000326225.3	AHCTF1 Links Ensembl NCBI GeneCards UniProt Show fit	AT-hook containing transcription factor 1
chr12_+_67269328 Show fit	0.00	ENST00000545606.6	CAND1 Links Ensembl NCBI GeneCards UniProt Show fit	cullin associated and neddylation dissociated 1
chr17_-_10697501 Show fit	0.00	ENST00000577427.1 ENST00000255390.10	SCO1 Links Ensembl NCBI GeneCards UniProt Show fit	synthesis of cytochrome C oxidase 1
chr6_-_87702221 Show fit	0.00	ENST00000257787.6	AKIRIN2 Links Ensembl NCBI GeneCards UniProt Show fit	akirin 2
chr15_+_51829644 Show fit	0.00	ENST00000308580.12	TMOD3 Links Ensembl NCBI GeneCards UniProt Show fit	tropomodulin 3
chr9_-_121201836 Show fit	0.00	ENST00000373840.9	RAB14 Links Ensembl NCBI GeneCards UniProt Show fit	RAB14, member RAS oncogene family
chr5_+_109689915 Show fit	0.00	ENST00000261483.5	MAN2A1 Links Ensembl NCBI GeneCards UniProt Show fit	mannosidase alpha class 2A member 1
chr7_-_26200734 Show fit	0.00	ENST00000354667.8 ENST00000618183.5	HNRNPA2B1 Links Ensembl NCBI GeneCards UniProt Show fit	heterogeneous nuclear ribonucleoprotein A2/B1
chr8_-_67343768 Show fit	0.00	ENST00000262215.8	ARFGEF1 Links Ensembl NCBI GeneCards UniProt Show fit	ADP ribosylation factor guanine nucleotide exchange factor 1
chr15_-_26773022 Show fit	0.00	ENST00000311550.10 ENST00000622697.4	GABRB3 Links Ensembl NCBI GeneCards UniProt Show fit	gamma-aminobutyric acid type A receptor subunit beta3
chr12_-_122526929 Show fit	0.00	ENST00000331738.12 ENST00000528279.1 ENST00000344591.8 ENST00000526560.6	RSRC2 Links Ensembl NCBI GeneCards UniProt Show fit	arginine and serine rich coiled-coil 2
chr4_+_48341505 Show fit	0.00	ENST00000264313.11	SLAIN2 Links Ensembl NCBI GeneCards UniProt Show fit	SLAIN motif family member 2
chr17_-_29294141 Show fit	0.00	ENST00000225388.9	NUFIP2 Links Ensembl NCBI GeneCards UniProt Show fit	nuclear FMR1 interacting protein 2

View svg image
View png image

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0019797	procollagen-proline 3-dioxygenase activity(GO:0019797)