Project
avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)
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Results for CAGUAAC
Z-value: 0.59
Motif logo
miRNA associated with seed CAGUAAC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-802
|
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr8_+_96493803 Show fit | 0.26 |
ENST00000518385.5
ENST00000302190.9 |
syndecan 2 |
|
| chr1_+_78004930 Show fit | 0.22 |
ENST00000370763.6
|
DnaJ heat shock protein family (Hsp40) member B4 |
|
| chr1_-_72282457 Show fit | 0.22 |
ENST00000357731.10
|
neuronal growth regulator 1 |
|
| chr4_+_144646145 Show fit | 0.20 |
ENST00000296575.8
ENST00000434550.2 |
hedgehog interacting protein |
|
| chr11_-_74398378 Show fit | 0.20 |
ENST00000298198.5
|
phosphoglucomutase 2 like 1 |
|
| chr5_-_128538230 Show fit | 0.14 |
ENST00000262464.9
|
fibrillin 2 |
|
| chr1_-_182391783 Show fit | 0.12 |
ENST00000331872.11
ENST00000339526.8 |
glutamate-ammonia ligase |
|
| chr16_-_73048104 Show fit | 0.12 |
ENST00000268489.10
|
zinc finger homeobox 3 |
|
| chr7_+_90596281 Show fit | 0.10 |
ENST00000380050.8
|
cyclin dependent kinase 14 |
|
| chr5_+_173888335 Show fit | 0.09 |
ENST00000265085.10
|
cytoplasmic polyadenylation element binding protein 4 |
Network of associatons between targets according to the STRING database.
First level regulatory network of CAGUAAC
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0008218 | bioluminescence(GO:0008218) |
| 0.0 | 0.2 | GO:0019388 | galactose catabolic process(GO:0019388) |
| 0.0 | 0.1 | GO:0006542 | glutamine biosynthetic process(GO:0006542) |
| 0.0 | 0.1 | GO:1904059 | regulation of locomotor rhythm(GO:1904059) |
| 0.0 | 0.1 | GO:0035583 | sequestering of TGFbeta in extracellular matrix(GO:0035583) |
| 0.0 | 0.1 | GO:0018008 | N-terminal peptidyl-glycine N-myristoylation(GO:0018008) |
| 0.0 | 0.0 | GO:0034402 | recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex(GO:0034402) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0000308 | cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0097108 | hedgehog family protein binding(GO:0097108) |
| 0.0 | 0.2 | GO:0004614 | phosphoglucomutase activity(GO:0004614) |
| 0.0 | 0.1 | GO:0016880 | glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880) |
| 0.0 | 0.1 | GO:0001069 | regulatory region RNA binding(GO:0001069) |
| 0.0 | 0.1 | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity(GO:0004379) myristoyltransferase activity(GO:0019107) |
| 0.0 | 0.1 | GO:0004157 | dihydropyrimidinase activity(GO:0004157) |
| 0.0 | 0.1 | GO:0030023 | extracellular matrix constituent conferring elasticity(GO:0030023) |
| 0.0 | 0.0 | GO:0030350 | iron-responsive element binding(GO:0030350) |