Project
avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)
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Results for GGACGGA
Z-value: 0.20
Motif logo
miRNA associated with seed GGACGGA
| Name | miRBASE accession |
|---|---|
|
hsa-miR-184
|
MIMAT0000454 |
Activity profile of GGACGGA motif
Sorted Z-values of GGACGGA motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_56579555 | 0.08 |
ENST00000371250.4
|
PLPP3
|
phospholipid phosphatase 3 |
| chr5_-_173328407 | 0.08 |
ENST00000265087.9
|
STC2
|
stanniocalcin 2 |
| chr2_+_120013068 | 0.05 |
ENST00000443902.6
ENST00000263713.10 |
EPB41L5
|
erythrocyte membrane protein band 4.1 like 5 |
| chr11_+_117178728 | 0.01 |
ENST00000532960.5
ENST00000324225.9 |
SIDT2
|
SID1 transmembrane family member 2 |
| chr10_+_100535927 | 0.01 |
ENST00000299163.7
|
HIF1AN
|
hypoxia inducible factor 1 subunit alpha inhibitor |
| chr12_-_124495252 | 0.01 |
ENST00000405201.5
|
NCOR2
|
nuclear receptor corepressor 2 |
| chr1_-_18902520 | 0.01 |
ENST00000538839.5
ENST00000290597.9 ENST00000375341.8 |
ALDH4A1
|
aldehyde dehydrogenase 4 family member A1 |
| chr3_-_147406520 | 0.01 |
ENST00000463250.1
ENST00000383075.8 |
ZIC4
|
Zic family member 4 |
| chr22_-_38872206 | 0.01 |
ENST00000407418.8
ENST00000216083.6 |
CBX6
|
chromobox 6 |
| chr19_+_18683656 | 0.00 |
ENST00000338797.10
ENST00000321949.13 |
CRTC1
|
CREB regulated transcription coactivator 1 |
| chr22_+_40177917 | 0.00 |
ENST00000454349.7
ENST00000335727.13 |
TNRC6B
|
trinucleotide repeat containing adaptor 6B |
| chr4_-_173530219 | 0.00 |
ENST00000359562.4
|
HAND2
|
heart and neural crest derivatives expressed 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of GGACGGA
Gene Ontology Analysis
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |