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avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)

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Results for IRF9

Z-value: 0.78

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Transcription factors associated with IRF9

Gene Symbol Gene ID Gene Info
ENSG00000213928.9 interferon regulatory factor 9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
IRF9hg38_v1_chr14_+_24161257_241613220.695.8e-02Click!

Activity profile of IRF9 motif

Sorted Z-values of IRF9 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr6_+_72212887 0.91 ENST00000523963.5
regulating synaptic membrane exocytosis 1
chr6_+_72212802 0.90 ENST00000401910.7
regulating synaptic membrane exocytosis 1
chr11_+_114060204 0.88 ENST00000683318.1
zinc finger and BTB domain containing 16
chr17_+_6756035 0.72 ENST00000361842.8
ENST00000574907.5
XIAP associated factor 1
chr17_+_6755834 0.67 ENST00000346752.8
XIAP associated factor 1
chr13_-_42992165 0.64 ENST00000398762.7
ENST00000313640.11
ENST00000313624.12
epithelial stromal interaction 1
chr5_+_32710630 0.64 ENST00000326958.5
natriuretic peptide receptor 3
chr1_+_78649818 0.57 ENST00000370747.9
ENST00000438486.1
interferon induced protein 44
chr18_-_28036585 0.55 ENST00000399380.7
cadherin 2
chr1_+_162632454 0.54 ENST00000367921.8
ENST00000367922.7
discoidin domain receptor tyrosine kinase 2
chr6_-_81752671 0.45 ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
terminal nucleotidyltransferase 5A
chr1_+_220879434 0.44 ENST00000366903.8
H2.0 like homeobox
chr3_-_122564232 0.41 ENST00000471785.5
ENST00000466126.1
poly(ADP-ribose) polymerase family member 9
chr14_+_24161257 0.41 ENST00000396864.8
ENST00000557894.5
ENST00000559284.5
ENST00000560275.5
interferon regulatory factor 9
chr3_-_122564577 0.39 ENST00000477522.6
ENST00000360356.6
poly(ADP-ribose) polymerase family member 9
chr11_-_86672114 0.34 ENST00000393324.7
malic enzyme 3
chr11_-_86672630 0.33 ENST00000543262.5
malic enzyme 3
chr11_-_86672419 0.32 ENST00000524826.7
ENST00000532471.1
malic enzyme 3
chr11_-_57567617 0.31 ENST00000287156.9
ubiquitin conjugating enzyme E2 L6
chr7_+_134866831 0.30 ENST00000435928.1
caldesmon 1
chr2_-_151289613 0.28 ENST00000243346.10
N-myc and STAT interactor
chr15_+_91100194 0.28 ENST00000394232.6
synaptic vesicle glycoprotein 2B
chr1_+_1013485 0.27 ENST00000649529.1
ISG15 ubiquitin like modifier
chr9_-_92536031 0.27 ENST00000344604.9
ENST00000375540.5
extracellular matrix protein 2
chr4_+_186069144 0.27 ENST00000513189.1
ENST00000296795.8
toll like receptor 3
chr10_+_89332484 0.26 ENST00000371811.4
ENST00000680037.1
ENST00000679583.1
ENST00000679897.1
interferon induced protein with tetratricopeptide repeats 3
chr3_-_121660892 0.26 ENST00000428394.6
ENST00000314583.8
hematopoietic cell-specific Lyn substrate 1
chr19_-_17405554 0.23 ENST00000252593.7
bone marrow stromal cell antigen 2
chr3_+_187368367 0.22 ENST00000259030.3
receptor transporter protein 4
chrX_-_63785510 0.22 ENST00000437457.6
ENST00000374878.5
ENST00000623517.3
Cdc42 guanine nucleotide exchange factor 9
chr4_+_159241016 0.21 ENST00000644902.1
Rap guanine nucleotide exchange factor 2
chr6_-_24935942 0.20 ENST00000645100.1
ENST00000643898.2
ENST00000613507.4
RHO family interacting cell polarization regulator 2
chr17_+_48831021 0.20 ENST00000509507.5
ENST00000448105.6
ENST00000570513.5
ENST00000509415.5
ENST00000513119.5
ENST00000416445.6
ENST00000508679.5
ENST00000258947.8
ENST00000505071.5
calcium binding and coiled-coil domain 2
chr10_+_89414555 0.20 ENST00000371795.5
ENST00000681422.1
interferon induced protein with tetratricopeptide repeats 5
chr7_+_101085464 0.19 ENST00000306085.11
ENST00000412507.1
tripartite motif containing 56
chr17_+_80260826 0.19 ENST00000508628.6
ENST00000582970.5
ENST00000319921.4
ring finger protein 213
chr1_+_241532121 0.18 ENST00000366558.7
kynurenine 3-monooxygenase
chr10_+_89301932 0.18 ENST00000371826.4
ENST00000679755.1
interferon induced protein with tetratricopeptide repeats 2
chr14_+_100065400 0.17 ENST00000555706.5
ENST00000392920.8
ENST00000555048.5
Enah/Vasp-like
chr9_-_21995301 0.16 ENST00000498628.6
cyclin dependent kinase inhibitor 2A
chr16_-_15643024 0.16 ENST00000540441.6
meiosis regulator and mRNA stability factor 1
chr3_-_179451387 0.15 ENST00000675901.1
ENST00000232564.8
ENST00000674862.1
ENST00000497513.1
G protein subunit beta 4
chr11_-_615570 0.15 ENST00000649187.1
ENST00000647801.1
ENST00000397566.5
ENST00000397570.5
interferon regulatory factor 7
chr4_-_76213724 0.15 ENST00000639738.1
scavenger receptor class B member 2
chr4_-_76213846 0.15 ENST00000639145.1
scavenger receptor class B member 2
chr3_-_146544538 0.13 ENST00000462666.5
phospholipid scramblase 1
chr15_+_73994694 0.13 ENST00000268058.8
ENST00000395132.6
ENST00000268059.10
ENST00000354026.10
ENST00000565898.5
ENST00000569477.5
ENST00000569965.5
ENST00000567543.5
ENST00000436891.7
ENST00000435786.6
ENST00000564428.5
ENST00000359928.8
PML nuclear body scaffold
chr3_-_146544850 0.13 ENST00000472349.1
phospholipid scramblase 1
chr2_-_151261839 0.13 ENST00000331426.6
RNA binding motif protein 43
chr9_-_21995262 0.13 ENST00000494262.5
cyclin dependent kinase inhibitor 2A
chr17_-_4263847 0.13 ENST00000570535.5
ENST00000574367.5
ENST00000341657.9
ankyrin repeat and FYVE domain containing 1
chr4_-_76213817 0.12 ENST00000264896.8
ENST00000640640.1
ENST00000640957.1
scavenger receptor class B member 2
chr6_+_125919296 0.12 ENST00000444128.2
nuclear receptor coactivator 7
chr3_-_146544636 0.12 ENST00000486631.5
phospholipid scramblase 1
chr6_+_3068487 0.12 ENST00000259808.9
receptor interacting serine/threonine kinase 1
chr4_-_76213589 0.12 ENST00000638603.1
ENST00000452464.6
scavenger receptor class B member 2
chr12_-_121039204 0.12 ENST00000620239.5
2'-5'-oligoadenylate synthetase like
chr14_+_22462932 0.12 ENST00000390477.2
T cell receptor delta constant
chr12_-_56360084 0.12 ENST00000314128.9
ENST00000557235.5
ENST00000651915.1
signal transducer and activator of transcription 2
chr3_-_146544701 0.12 ENST00000487389.5
phospholipid scramblase 1
chr1_+_154405193 0.12 ENST00000622330.4
ENST00000344086.8
interleukin 6 receptor
chr16_+_28863812 0.11 ENST00000684370.1
SH2B adaptor protein 1
chr6_+_125919210 0.11 ENST00000438495.6
nuclear receptor coactivator 7
chr12_-_121039236 0.11 ENST00000257570.9
2'-5'-oligoadenylate synthetase like
chr10_+_113679523 0.11 ENST00000345633.8
ENST00000614447.4
ENST00000369321.6
caspase 7
chr20_-_49278034 0.11 ENST00000371744.5
ENST00000396105.6
ENST00000371752.5
zinc finger NFX1-type containing 1
chr12_-_121039156 0.11 ENST00000339275.10
2'-5'-oligoadenylate synthetase like
chr10_+_113679839 0.11 ENST00000369318.8
ENST00000369315.5
caspase 7
chr5_+_134526100 0.11 ENST00000395003.5
jade family PHD finger 2
chr11_+_67023085 0.10 ENST00000527043.6
synaptotagmin 12
chrX_-_49002197 0.10 ENST00000622231.1
ENST00000617369.4
ENST00000593475.5
ENST00000622599.4
GRIP1 associated protein 1
chr3_+_122680802 0.10 ENST00000474629.7
poly(ADP-ribose) polymerase family member 14
chr19_+_17405685 0.10 ENST00000646744.1
ENST00000635536.2
ENST00000635060.2
ENST00000634291.2
ENST00000645298.1
ENST00000528911.5
BST2 interferon stimulated positive regulator
multivesicular body subunit 12A
chrX_-_49002256 0.10 ENST00000611705.4
ENST00000376423.8
GRIP1 associated protein 1
chr3_-_146544578 0.10 ENST00000342435.9
ENST00000448787.6
phospholipid scramblase 1
chr3_-_122564253 0.10 ENST00000492382.5
ENST00000682323.1
ENST00000462315.5
poly(ADP-ribose) polymerase family member 9
chr11_-_615921 0.09 ENST00000348655.11
ENST00000525445.6
ENST00000330243.9
interferon regulatory factor 7
chr2_+_33476640 0.09 ENST00000425210.5
ENST00000444784.5
ENST00000423159.5
ENST00000403687.8
RAS guanyl releasing protein 3
chr3_-_28348805 0.09 ENST00000457172.5
ENST00000479665.6
5-azacytidine induced 2
chr1_-_182589239 0.08 ENST00000367559.7
ENST00000539397.1
ribonuclease L
chr1_+_236524581 0.08 ENST00000526634.5
galectin 8
chr6_-_117573571 0.08 ENST00000467125.1
novel protein, GOPC-ROS1 readthrough
chr6_-_110415539 0.08 ENST00000368923.8
ENST00000368924.9
D-aspartate oxidase
chrX_-_40097403 0.08 ENST00000397354.7
BCL6 corepressor
chr13_+_49495941 0.08 ENST00000378319.8
ENST00000496623.5
ENST00000426879.5
PHD finger protein 11
chr3_-_71360753 0.07 ENST00000648783.1
forkhead box P1
chr13_+_49496355 0.07 ENST00000496612.5
ENST00000357596.7
ENST00000485919.5
ENST00000442195.5
PHD finger protein 11
chr3_-_71581540 0.07 ENST00000650068.1
forkhead box P1
chr1_-_206946448 0.06 ENST00000356495.5
polymeric immunoglobulin receptor
chr1_+_241532370 0.06 ENST00000366559.9
ENST00000366557.8
kynurenine 3-monooxygenase
chr12_+_6772512 0.06 ENST00000441671.6
ENST00000203629.3
lymphocyte activating 3
chr12_-_121038967 0.06 ENST00000680620.1
ENST00000679655.1
ENST00000543677.2
2'-5'-oligoadenylate synthetase like
chr17_+_27631148 0.06 ENST00000313648.10
ENST00000395473.7
ENST00000577392.5
ENST00000584661.5
galectin 9
chr12_-_27014300 0.06 ENST00000535819.1
ENST00000543803.5
ENST00000535423.5
ENST00000539741.5
ENST00000343028.9
ENST00000545600.1
ENST00000543088.5
transmembrane 7 superfamily member 3
chr1_-_161631032 0.06 ENST00000534776.1
ENST00000613418.4
ENST00000614870.4
Fc fragment of IgG receptor IIIb
chr3_+_63911929 0.06 ENST00000487717.5
ataxin 7
chr19_+_17406099 0.05 ENST00000634942.2
ENST00000634568.1
ENST00000600514.5
BST2 interferon stimulated positive regulator
multivesicular body subunit 12A
chr19_+_17405734 0.05 ENST00000635572.1
ENST00000634675.1
ENST00000634813.1
ENST00000647283.1
ENST00000635435.2
ENST00000634731.2
ENST00000635339.1
ENST00000528604.5
BST2 interferon stimulated positive regulator
multivesicular body subunit 12A
chr3_+_63912588 0.05 ENST00000522345.2
ataxin 7
chr8_-_143986425 0.05 ENST00000313059.9
ENST00000524918.5
ENST00000313028.12
ENST00000525773.5
poly(ADP-ribose) polymerase family member 10
chr9_+_99906646 0.05 ENST00000259400.11
ENST00000531035.5
ENST00000525640.5
ENST00000534052.1
ENST00000526607.1
syntaxin 17
chr20_+_62804794 0.05 ENST00000290291.10
opioid growth factor receptor
chr9_-_33264559 0.04 ENST00000473781.1
ENST00000379704.7
ENST00000488499.1
BAG cochaperone 1
chr1_-_161631152 0.04 ENST00000421702.3
ENST00000650385.1
Fc fragment of IgG receptor IIIb
chr3_-_28348924 0.04 ENST00000414162.5
ENST00000420543.6
5-azacytidine induced 2
chr4_+_37891060 0.04 ENST00000261439.9
ENST00000508802.5
ENST00000402522.1
TBC1 domain family member 1
chr22_+_18150162 0.04 ENST00000215794.8
ubiquitin specific peptidase 18
chr6_-_105137147 0.04 ENST00000314641.10
blood vessel epicardial substance
chr17_+_40140500 0.03 ENST00000264645.12
CASC3 exon junction complex subunit
chr18_-_69956924 0.03 ENST00000581982.5
ENST00000280200.8
CD226 molecule
chr19_+_16143678 0.03 ENST00000613986.4
ENST00000593031.1
hematopoietic SH2 domain containing
chr1_+_156082563 0.03 ENST00000368301.6
lamin A/C
chr13_-_40982880 0.03 ENST00000635415.1
E74 like ETS transcription factor 1
chr21_-_33931607 0.03 ENST00000429238.2
novel protein similar to ATP synthase delta (OSCP) subunit domain
chr3_-_28348629 0.02 ENST00000334100.10
5-azacytidine induced 2
chr20_+_11917859 0.02 ENST00000618296.4
ENST00000378226.7
BTB domain containing 3
chr3_-_142028617 0.02 ENST00000477292.5
ENST00000478006.5
ENST00000495310.5
ENST00000486111.5
transcription factor Dp-2
chr14_-_67515153 0.02 ENST00000555994.6
transmembrane protein 229B
chr3_-_123980727 0.02 ENST00000620893.4
rhophilin associated tail protein 1
chr15_+_73994777 0.02 ENST00000563500.5
PML nuclear body scaffold
chr4_+_87006988 0.01 ENST00000307808.10
AF4/FMR2 family member 1
chr4_-_74794514 0.01 ENST00000395743.8
betacellulin
chr1_+_159009886 0.01 ENST00000340979.10
ENST00000368131.8
ENST00000295809.12
ENST00000368132.7
interferon gamma inducible protein 16
chr6_-_33314247 0.01 ENST00000475304.5
ENST00000489157.5
TAP binding protein
chr6_-_33314202 0.01 ENST00000426633.6
ENST00000467025.1
TAP binding protein
chr17_-_42112674 0.01 ENST00000251642.8
ENST00000591220.5
DExH-box helicase 58
chr4_-_76213520 0.00 ENST00000640634.1
scavenger receptor class B member 2
chr5_+_90640718 0.00 ENST00000640403.1
adhesion G protein-coupled receptor V1
chr4_-_168318743 0.00 ENST00000393743.8
DExD/H-box helicase 60
chr3_+_122564327 0.00 ENST00000296161.9
ENST00000383661.3
deltex E3 ubiquitin ligase 3L
chr18_+_3262956 0.00 ENST00000584539.1
myosin light chain 12B
chr9_+_68356603 0.00 ENST00000396396.6
phosphoglucomutase 5
chr11_+_5624987 0.00 ENST00000429814.3
tripartite motif containing 34

Network of associatons between targets according to the STRING database.

First level regulatory network of IRF9

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 GO:0051138 positive regulation of NK T cell differentiation(GO:0051138)
0.1 1.0 GO:0072592 oxygen metabolic process(GO:0072592)
0.1 0.9 GO:0070212 protein poly-ADP-ribosylation(GO:0070212)
0.1 0.3 GO:1902524 positive regulation of protein K48-linked ubiquitination(GO:1902524)
0.1 1.8 GO:0098828 positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828)
0.1 0.5 GO:1905123 regulation of glucosylceramidase activity(GO:1905123)
0.1 0.2 GO:1901253 negative regulation of intracellular transport of viral material(GO:1901253)
0.1 0.6 GO:0006659 phosphatidylserine biosynthetic process(GO:0006659)
0.1 0.4 GO:0045629 negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.1 0.6 GO:1902897 regulation of postsynaptic density protein 95 clustering(GO:1902897)
0.1 0.3 GO:0045356 microglial cell activation involved in immune response(GO:0002282) positive regulation of interferon-alpha biosynthetic process(GO:0045356)
0.1 0.3 GO:2000670 positive regulation of dendritic cell apoptotic process(GO:2000670)
0.0 0.2 GO:0019805 quinolinate biosynthetic process(GO:0019805)
0.0 0.2 GO:0034124 regulation of MyD88-dependent toll-like receptor signaling pathway(GO:0034124)
0.0 0.2 GO:0019075 virus maturation(GO:0019075)
0.0 0.2 GO:1903904 negative regulation of establishment of T cell polarity(GO:1903904) negative regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001107)
0.0 0.6 GO:0002158 osteoclast proliferation(GO:0002158)
0.0 0.2 GO:2000051 negative regulation of non-canonical Wnt signaling pathway(GO:2000051)
0.0 0.5 GO:0090091 positive regulation of extracellular matrix disassembly(GO:0090091)
0.0 0.2 GO:1905244 regulation of modification of synaptic structure(GO:1905244)
0.0 0.3 GO:0035986 senescence-associated heterochromatin focus assembly(GO:0035986)
0.0 0.1 GO:0032242 regulation of nucleoside transport(GO:0032242) positive regulation of necroptotic process(GO:0060545)
0.0 1.1 GO:0035456 response to interferon-beta(GO:0035456)
0.0 0.1 GO:0044565 dendritic cell proliferation(GO:0044565)
0.0 0.1 GO:0002384 hepatic immune response(GO:0002384)
0.0 0.4 GO:0035457 cellular response to interferon-alpha(GO:0035457)
0.0 0.2 GO:0072734 response to staurosporine(GO:0072733) cellular response to staurosporine(GO:0072734)
0.0 0.1 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.0 0.3 GO:0032020 ISG15-protein conjugation(GO:0032020)
0.0 0.1 GO:0048549 positive regulation of pinocytosis(GO:0048549)
0.0 0.1 GO:0002415 immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415)
0.0 0.1 GO:1904977 lymphatic endothelial cell migration(GO:1904977)
0.0 0.1 GO:0000415 negative regulation of histone H3-K36 methylation(GO:0000415)
0.0 0.3 GO:0045651 positive regulation of macrophage differentiation(GO:0045651)
0.0 0.1 GO:1901098 positive regulation of autophagosome maturation(GO:1901098)
0.0 0.0 GO:0060369 positive regulation of Fc receptor mediated stimulatory signaling pathway(GO:0060369)
0.0 0.1 GO:0045085 negative regulation of interleukin-2 biosynthetic process(GO:0045085)
0.0 0.2 GO:1900028 negative regulation of ruffle assembly(GO:1900028)
0.0 0.0 GO:0060931 sinoatrial node cell development(GO:0060931)
0.0 0.2 GO:1902083 negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0035985 senescence-associated heterochromatin focus(GO:0035985)
0.0 1.8 GO:0048786 presynaptic active zone(GO:0048786)
0.0 0.2 GO:0098837 postsynaptic recycling endosome(GO:0098837)
0.0 0.6 GO:0016342 catenin complex(GO:0016342)
0.0 0.1 GO:0005896 interleukin-6 receptor complex(GO:0005896)
0.0 0.3 GO:0030478 actin cap(GO:0030478)
0.0 0.2 GO:0060171 stereocilium membrane(GO:0060171)
0.0 0.2 GO:0008385 IkappaB kinase complex(GO:0008385)
0.0 0.2 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.3 GO:0036020 endolysosome membrane(GO:0036020)
0.0 0.1 GO:0044352 pinosome(GO:0044352) macropinosome(GO:0044354)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0004473 malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471) malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.6 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.1 0.5 GO:0038062 protein tyrosine kinase collagen receptor activity(GO:0038062)
0.1 0.3 GO:0070052 collagen V binding(GO:0070052)
0.1 0.9 GO:0001206 transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206)
0.0 0.1 GO:0070119 ciliary neurotrophic factor binding(GO:0070119)
0.0 0.2 GO:0031849 olfactory receptor binding(GO:0031849)
0.0 0.6 GO:0042609 CD4 receptor binding(GO:0042609)
0.0 0.8 GO:0070403 NAD+ binding(GO:0070403)
0.0 0.6 GO:0045294 alpha-catenin binding(GO:0045294)
0.0 0.2 GO:0016174 NAD(P)H oxidase activity(GO:0016174)
0.0 0.3 GO:0031386 protein tag(GO:0031386)
0.0 0.2 GO:0017034 Rap guanyl-nucleotide exchange factor activity(GO:0017034)
0.0 0.3 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861)
0.0 0.3 GO:0005523 tropomyosin binding(GO:0005523)
0.0 0.1 GO:0042289 MHC class II protein binding(GO:0042289)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 ST TYPE I INTERFERON PATHWAY Type I Interferon (alpha/beta IFN) Pathway
0.0 0.3 SA REG CASCADE OF CYCLIN EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.8 REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Norepinephrine Neurotransmitter Release Cycle
0.0 0.4 REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 Genes involved in IKK complex recruitment mediated by RIP1
0.0 0.2 REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
0.0 0.2 REACTOME TRYPTOPHAN CATABOLISM Genes involved in Tryptophan catabolism
0.0 0.6 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions