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avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)

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Results for REST

Z-value: 0.02

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Transcription factors associated with REST

Gene Symbol Gene ID Gene Info
ENSG00000084093.19 RE1 silencing transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
RESThg38_v1_chr4_+_56908894_56909016,
hg38_v1_chr4_+_56907876_56907947
-0.561.5e-01Click!

Activity profile of REST motif

Sorted Z-values of REST motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_155070317 0.22 ENST00000287907.3
5-hydroxytryptamine receptor 5A
chr1_+_209938207 0.14 ENST00000472886.5
synaptotagmin 14
chr12_+_71439976 0.13 ENST00000536515.5
ENST00000540815.2
leucine rich repeat containing G protein-coupled receptor 5
chr1_+_209938169 0.13 ENST00000367019.5
ENST00000537238.5
ENST00000637265.1
synaptotagmin 14
chr12_+_71439789 0.11 ENST00000266674.10
leucine rich repeat containing G protein-coupled receptor 5
chr9_-_101594995 0.11 ENST00000636434.1
protein phosphatase 3 regulatory subunit B, beta
chr17_-_3433841 0.10 ENST00000248384.1
olfactory receptor family 1 subfamily E member 2
chr2_-_47570905 0.09 ENST00000327876.5
potassium two pore domain channel subfamily K member 12
chr20_+_5911501 0.08 ENST00000378961.9
ENST00000455042.1
chromogranin B
chr11_+_20599602 0.08 ENST00000525748.6
solute carrier family 6 member 5
chr12_+_113358542 0.08 ENST00000545182.6
ENST00000280800.5
phospholipase B domain containing 2
chr14_+_92923143 0.08 ENST00000216492.10
ENST00000334654.4
chromogranin A
chr15_-_72320149 0.07 ENST00000287202.10
CUGBP Elav-like family member 6
chr17_+_32486975 0.07 ENST00000313401.4
cyclin dependent kinase 5 regulatory subunit 1
chr3_+_194136138 0.07 ENST00000232424.4
hes family bHLH transcription factor 1
chr1_+_154567820 0.06 ENST00000637900.1
cholinergic receptor nicotinic beta 2 subunit
chr11_-_6655788 0.06 ENST00000299441.5
dachsous cadherin-related 1
chr3_+_120908072 0.06 ENST00000273666.10
ENST00000471454.6
ENST00000472879.5
ENST00000497029.5
ENST00000492541.5
syntaxin binding protein 5 like
chr11_-_125903190 0.06 ENST00000227474.8
ENST00000613398.4
ENST00000534158.5
ENST00000529801.1
pseudouridine synthase 3
chr11_+_62613236 0.05 ENST00000278833.4
retinal outer segment membrane protein 1
chr11_+_92969651 0.05 ENST00000257068.3
ENST00000528076.1
melatonin receptor 1B
chr16_+_285680 0.05 ENST00000435833.1
protein disulfide isomerase family A member 2
chr11_-_93197932 0.05 ENST00000326402.9
solute carrier family 36 member 4
chrX_-_49200174 0.05 ENST00000472598.5
ENST00000263233.9
ENST00000479808.5
synaptophysin
chr14_+_93430927 0.05 ENST00000393151.6
unc-79 homolog, NALCN channel complex subunit
chr9_+_132582581 0.05 ENST00000263610.7
BarH like homeobox 1
chr2_-_51032390 0.05 ENST00000404971.5
neurexin 1
chrX_+_7147675 0.05 ENST00000674429.1
steroid sulfatase
chr19_+_39268394 0.05 ENST00000331982.6
interferon lambda 2
chr11_+_637244 0.05 ENST00000176183.6
dopamine receptor D4
chr2_+_225399684 0.05 ENST00000636099.1
neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
chr8_-_90082871 0.05 ENST00000265431.7
calbindin 1
chrX_+_7147237 0.04 ENST00000666110.2
steroid sulfatase
chr9_-_101594918 0.04 ENST00000374806.2
protein phosphatase 3 regulatory subunit B, beta
chr2_-_51032151 0.04 ENST00000628515.2
neurexin 1
chr3_-_114179052 0.04 ENST00000383673.5
ENST00000295881.9
dopamine receptor D3
chr16_+_2969270 0.04 ENST00000293978.12
progestin and adipoQ receptor family member 4
chr10_-_101031095 0.04 ENST00000645349.1
ENST00000619208.6
ENST00000644782.1
ENST00000370215.7
ENST00000646029.1
PDZ domain containing 7
chr16_+_2969307 0.03 ENST00000576565.1
ENST00000318782.9
progestin and adipoQ receptor family member 4
chr5_+_175871570 0.03 ENST00000512824.5
ENST00000393745.8
complexin 2
chr12_-_29783798 0.03 ENST00000552618.5
ENST00000551659.5
ENST00000539277.6
transmembrane O-mannosyltransferase targeting cadherins 1
chr9_-_133609325 0.03 ENST00000673969.1
family with sequence similarity 163 member B
chr2_-_51032091 0.03 ENST00000637511.1
ENST00000405472.7
ENST00000405581.3
ENST00000401669.7
neurexin 1
chr12_-_57050102 0.03 ENST00000300119.8
myosin IA
chr2_-_27308445 0.03 ENST00000296099.2
urocortin
chr6_+_154039102 0.03 ENST00000360422.8
ENST00000330432.12
opioid receptor mu 1
chr3_-_114178698 0.03 ENST00000467632.5
dopamine receptor D3
chr1_+_32886456 0.03 ENST00000373467.4
hippocalcin
chr1_+_37793865 0.03 ENST00000397631.7
mannosidase endo-alpha like
chr14_+_93430853 0.03 ENST00000553484.5
unc-79 homolog, NALCN channel complex subunit
chr1_-_151716782 0.03 ENST00000420342.1
ENST00000290583.9
CUGBP Elav-like family member 3
chr17_+_58148384 0.03 ENST00000268912.6
ENST00000641449.1
olfactory receptor family 4 subfamily D member 1
chr8_+_6708626 0.03 ENST00000285518.11
1-acylglycerol-3-phosphate O-acyltransferase 5
chr4_-_174829212 0.03 ENST00000340217.5
ENST00000274093.8
glycine receptor alpha 3
chr19_+_40530464 0.03 ENST00000392023.1
spectrin beta, non-erythrocytic 4
chr2_+_130756291 0.03 ENST00000458606.5
ENST00000423981.1
APC membrane recruitment protein 3
chr12_+_66755 0.03 ENST00000538872.6
IQ motif and Sec7 domain ArfGEF 3
chr19_-_55180010 0.02 ENST00000589172.5
synaptotagmin 5
chr6_+_158536398 0.02 ENST00000367090.4
transmembrane protein 181
chr3_+_75906666 0.02 ENST00000487694.7
ENST00000602589.5
roundabout guidance receptor 2
chr10_-_49762335 0.02 ENST00000419399.4
ENST00000432695.2
oxoglutarate dehydrogenase L
chr1_-_101996919 0.02 ENST00000370103.9
olfactomedin 3
chr3_+_62319037 0.02 ENST00000494481.5
chromosome 3 open reading frame 14
chr19_-_3971051 0.02 ENST00000545797.7
ENST00000596311.5
death associated protein kinase 3
chr1_+_37793787 0.02 ENST00000373045.11
mannosidase endo-alpha like
chr1_+_212432891 0.02 ENST00000366988.5
neudesin neurotrophic factor
chr17_-_3398410 0.02 ENST00000322608.2
olfactory receptor family 1 subfamily E member 1
chr3_+_62318983 0.02 ENST00000232519.9
ENST00000462069.6
ENST00000465142.5
chromosome 3 open reading frame 14
chr4_+_157220654 0.02 ENST00000393815.6
glutamate ionotropic receptor AMPA type subunit 2
chr10_-_44385043 0.02 ENST00000374426.6
ENST00000395794.2
ENST00000374429.6
ENST00000395793.7
ENST00000343575.10
ENST00000395795.5
C-X-C motif chemokine ligand 12
chr10_-_49762276 0.02 ENST00000374103.9
oxoglutarate dehydrogenase L
chr9_-_121050264 0.02 ENST00000223642.3
complement C5
chr20_+_37383648 0.02 ENST00000373567.6
SRC proto-oncogene, non-receptor tyrosine kinase
chr9_+_135714582 0.01 ENST00000630792.2
potassium sodium-activated channel subfamily T member 1
chr16_+_4958289 0.01 ENST00000251170.12
SEC14 like lipid binding 5
chr9_+_135714425 0.01 ENST00000473941.5
ENST00000486577.6
potassium sodium-activated channel subfamily T member 1
chr5_+_71719267 0.01 ENST00000296777.5
CART prepropeptide
chr17_-_7315084 0.01 ENST00000570780.5
G protein pathway suppressor 2
chr2_-_51032536 0.01 ENST00000626899.1
ENST00000406316.6
neurexin 1
chr10_+_59177161 0.01 ENST00000373878.3
phytanoyl-CoA 2-hydroxylase interacting protein like
chr4_+_157220691 0.01 ENST00000509417.5
ENST00000645636.1
ENST00000296526.12
ENST00000264426.14
glutamate ionotropic receptor AMPA type subunit 2
chr11_+_45885625 0.01 ENST00000241014.6
mitogen-activated protein kinase 8 interacting protein 1
chr16_+_31459950 0.01 ENST00000564900.1
armadillo repeat containing 5
chr6_+_109978256 0.01 ENST00000414000.3
G protein-coupled receptor 6
chr1_+_154567770 0.01 ENST00000368476.4
cholinergic receptor nicotinic beta 2 subunit
chr1_-_175743529 0.01 ENST00000367674.7
ENST00000263525.6
tenascin R
chrX_-_47619850 0.01 ENST00000295987.13
ENST00000340666.5
synapsin I
chr16_+_24256313 0.01 ENST00000005284.4
calcium voltage-gated channel auxiliary subunit gamma 3
chr18_-_43277482 0.01 ENST00000255224.8
ENST00000590752.5
ENST00000596867.1
synaptotagmin 4
chr21_-_32728030 0.01 ENST00000382499.7
ENST00000433931.7
ENST00000382491.7
synaptojanin 1
chr6_+_109978297 0.01 ENST00000275169.5
G protein-coupled receptor 6
chr7_+_8433602 0.00 ENST00000405863.6
neurexophilin 1
chr14_-_94293071 0.00 ENST00000554723.5
serpin family A member 10
chr14_-_94293024 0.00 ENST00000393096.5
serpin family A member 10
chr14_-_94293260 0.00 ENST00000261994.9
serpin family A member 10
chr3_-_132035004 0.00 ENST00000429747.6
copine 4
chr6_+_138404206 0.00 ENST00000607197.6
ENST00000367697.7
heme binding protein 2
chr3_-_48662877 0.00 ENST00000164024.5
cadherin EGF LAG seven-pass G-type receptor 3
chrX_-_153971810 0.00 ENST00000310441.12
host cell factor C1
chr1_+_171781635 0.00 ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
eEF1A lysine and N-terminal methyltransferase
chr9_+_137139481 0.00 ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
glutamate ionotropic receptor NMDA type subunit 1
chr5_-_151924824 0.00 ENST00000455880.2
glycine receptor alpha 1
chr17_+_44308573 0.00 ENST00000590941.5
ENST00000225441.11
ENST00000426726.8
RUN domain containing 3A

Network of associatons between targets according to the STRING database.

First level regulatory network of REST

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway(GO:0007198)
0.0 0.1 GO:0003192 mitral valve formation(GO:0003192)
0.0 0.1 GO:0036233 glycine import(GO:0036233)
0.0 0.1 GO:1901899 positive regulation of relaxation of cardiac muscle(GO:1901899)
0.0 0.1 GO:0021722 superior olivary nucleus development(GO:0021718) superior olivary nucleus maturation(GO:0021722)
0.0 0.1 GO:0060164 trochlear nerve development(GO:0021558) auditory receptor cell fate determination(GO:0042668) negative regulation of auditory receptor cell differentiation(GO:0045608) regulation of timing of neuron differentiation(GO:0060164) negative regulation of pro-B cell differentiation(GO:2000974)
0.0 0.1 GO:0050883 musculoskeletal movement, spinal reflex action(GO:0050883)
0.0 0.2 GO:2001013 epithelial cell proliferation involved in renal tubule morphogenesis(GO:2001013)
0.0 0.0 GO:0051944 positive regulation of dopamine uptake involved in synaptic transmission(GO:0051586) positive regulation of catecholamine uptake involved in synaptic transmission(GO:0051944)
0.0 0.1 GO:0060084 synaptic transmission involved in micturition(GO:0060084)
0.0 0.0 GO:0035483 gastric motility(GO:0035482) gastric emptying(GO:0035483)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0016533 cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0016534 cyclin-dependent protein kinase 5 activator activity(GO:0016534)
0.0 0.1 GO:0004773 steryl-sulfatase activity(GO:0004773)
0.0 0.1 GO:0015375 glycine:sodium symporter activity(GO:0015375)
0.0 0.2 GO:0051378 amine binding(GO:0043176) serotonin binding(GO:0051378)
0.0 0.1 GO:0008502 melatonin receptor activity(GO:0008502)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.1 GO:0001591 dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors