Project
avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)
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Results for UAGUGUU
Z-value: 0.34
Motif logo
miRNA associated with seed UAGUGUU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-142-3p.2
|
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_56579555 Show fit | 0.26 |
ENST00000371250.4
|
phospholipid phosphatase 3 |
|
| chr1_-_72282457 Show fit | 0.23 |
ENST00000357731.10
|
neuronal growth regulator 1 |
|
| chr4_+_113049616 Show fit | 0.19 |
ENST00000504454.5
ENST00000357077.9 ENST00000394537.7 ENST00000672779.1 ENST00000264366.10 |
ankyrin 2 |
|
| chr4_+_144646145 Show fit | 0.17 |
ENST00000296575.8
ENST00000434550.2 |
hedgehog interacting protein |
|
| chr5_+_83471736 Show fit | 0.16 |
ENST00000265077.8
|
versican |
|
| chr9_-_111038037 Show fit | 0.15 |
ENST00000374431.7
|
lysophosphatidic acid receptor 1 |
|
| chr4_+_15002443 Show fit | 0.13 |
ENST00000538197.7
|
cytoplasmic polyadenylation element binding protein 2 |
|
| chr8_-_92103217 Show fit | 0.13 |
ENST00000615601.4
ENST00000523629.5 |
RUNX1 partner transcriptional co-repressor 1 |
|
| chr7_+_44748832 Show fit | 0.11 |
ENST00000309315.9
ENST00000457123.5 |
zinc finger MIZ-type containing 2 |
|
| chr5_-_180353317 Show fit | 0.09 |
ENST00000253778.13
|
glutamine-fructose-6-phosphate transaminase 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of UAGUGUU
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
| 0.0 | 0.2 | GO:0008354 | germ cell migration(GO:0008354) |
| 0.0 | 0.1 | GO:1900247 | cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248) |
| 0.0 | 0.1 | GO:1904566 | response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566) |
| 0.0 | 0.1 | GO:2001025 | positive regulation of response to drug(GO:2001025) |
| 0.0 | 0.1 | GO:1904059 | regulation of locomotor rhythm(GO:1904059) |
| 0.0 | 0.1 | GO:0097676 | histone H3-K36 dimethylation(GO:0097676) |
| 0.0 | 0.1 | GO:0018032 | protein amidation(GO:0018032) |
| 0.0 | 0.0 | GO:0015993 | L-ascorbic acid transport(GO:0015882) molecular hydrogen transport(GO:0015993) transepithelial L-ascorbic acid transport(GO:0070904) |
| 0.0 | 0.0 | GO:0001544 | initiation of primordial ovarian follicle growth(GO:0001544) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0071062 | alphav-beta3 integrin-vitronectin complex(GO:0071062) |
| 0.0 | 0.1 | GO:0097149 | centralspindlin complex(GO:0097149) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |
| 0.0 | 0.2 | GO:0097108 | hedgehog family protein binding(GO:0097108) |
| 0.0 | 0.1 | GO:0004360 | glutamine-fructose-6-phosphate transaminase (isomerizing) activity(GO:0004360) |
| 0.0 | 0.1 | GO:0003829 | beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity(GO:0003829) |
| 0.0 | 0.1 | GO:0035727 | lysophosphatidic acid binding(GO:0035727) |
| 0.0 | 0.1 | GO:0004598 | peptidylglycine monooxygenase activity(GO:0004504) peptidylamidoglycolate lyase activity(GO:0004598) |
| 0.0 | 0.1 | GO:0045322 | unmethylated CpG binding(GO:0045322) |
| 0.0 | 0.1 | GO:0043023 | ribosomal large subunit binding(GO:0043023) |
| 0.0 | 0.0 | GO:0008523 | L-ascorbate:sodium symporter activity(GO:0008520) sodium-dependent multivitamin transmembrane transporter activity(GO:0008523) L-ascorbic acid transporter activity(GO:0015229) sodium-dependent L-ascorbate transmembrane transporter activity(GO:0070890) |