avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
UBP1 Links Ensembl NCBI GeneCards UniProt	ENSG00000153560.12	upstream binding protein 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
UBP1	hg38_v1_chr3_-_33440343_33440413	-0.50	2.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_-_151141631 Show fit	0.95	ENST00000523714.5 ENST00000521749.5	ANXA6 Links Ensembl NCBI GeneCards UniProt Show fit	annexin A6
chr14_-_91946989 Show fit	0.94	ENST00000556154.5	FBLN5 Links Ensembl NCBI GeneCards UniProt Show fit	fibulin 5
chr14_-_91947383 Show fit	0.85	ENST00000267620.14	FBLN5 Links Ensembl NCBI GeneCards UniProt Show fit	fibulin 5
chr5_-_111757549 Show fit	0.65	ENST00000419114.6	NREP Links Ensembl NCBI GeneCards UniProt Show fit	neuronal regeneration related protein
chr5_-_111758061 Show fit	0.65	ENST00000509979.5 ENST00000513100.5 ENST00000508161.5 ENST00000455559.6	NREP Links Ensembl NCBI GeneCards UniProt Show fit	neuronal regeneration related protein
chr5_-_111757643 Show fit	0.61	ENST00000508870.5	NREP Links Ensembl NCBI GeneCards UniProt Show fit	neuronal regeneration related protein
chr5_-_111757704 Show fit	0.55	ENST00000379671.7	NREP Links Ensembl NCBI GeneCards UniProt Show fit	neuronal regeneration related protein
chr1_-_168729187 Show fit	0.50	ENST00000367817.4	DPT Links Ensembl NCBI GeneCards UniProt Show fit	dermatopontin
chr16_+_29812150 Show fit	0.33	ENST00000647876.1 ENST00000567551.2 ENST00000567659.3 ENST00000637565.1 ENST00000358758.12 ENST00000636619.1	PRRT2 Links Ensembl NCBI GeneCards UniProt Show fit	proline rich transmembrane protein 2
chr2_-_178478541 Show fit	0.33	ENST00000424785.7	FKBP7 Links Ensembl NCBI GeneCards UniProt Show fit	FKBP prolyl isomerase 7
chr16_+_29812230 Show fit	0.33	ENST00000300797.7 ENST00000637403.1 ENST00000572820.2 ENST00000637064.1 ENST00000636246.1	PRRT2 Links Ensembl NCBI GeneCards UniProt Show fit	proline rich transmembrane protein 2
chr8_+_76681208 Show fit	0.24	ENST00000651372.2	ZFHX4 Links Ensembl NCBI GeneCards UniProt Show fit	zinc finger homeobox 4
chr3_+_29281552 Show fit	0.24	ENST00000452462.5 ENST00000456853.1	RBMS3 Links Ensembl NCBI GeneCards UniProt Show fit	RNA binding motif single stranded interacting protein 3
chr22_+_22375984 Show fit	0.24	ENST00000390296.2	IGLV5-45 Links Ensembl NCBI GeneCards UniProt Show fit	immunoglobulin lambda variable 5-45
chr12_+_99647749 Show fit	0.24	ENST00000324341.2	FAM71C Links Ensembl NCBI GeneCards UniProt Show fit	family with sequence similarity 71 member C
chr9_-_35685462 Show fit	0.23	ENST00000607559.1	TPM2 Links Ensembl NCBI GeneCards UniProt Show fit	tropomyosin 2
chrX_+_54920796 Show fit	0.21	ENST00000442098.5 ENST00000430420.5 ENST00000453081.5 ENST00000319167.12 ENST00000622017.4 ENST00000375022.8 ENST00000399736.5 ENST00000440072.5 ENST00000173898.12 ENST00000431115.5 ENST00000440759.5 ENST00000375041.6	TRO Links Ensembl NCBI GeneCards UniProt Show fit	trophinin
chr10_+_80132591 Show fit	0.19	ENST00000372267.6	PLAC9 Links Ensembl NCBI GeneCards UniProt Show fit	placenta associated 9
chr10_+_21524627 Show fit	0.18	ENST00000651097.1	MLLT10 Links Ensembl NCBI GeneCards UniProt Show fit	MLLT10 histone lysine methyltransferase DOT1L cofactor
chr5_-_94111627 Show fit	0.17	ENST00000505869.5 ENST00000395965.8 ENST00000509163.5	FAM172A Links Ensembl NCBI GeneCards UniProt Show fit	family with sequence similarity 172 member A
chr4_-_119300546 Show fit	0.17	ENST00000504110.2	C4orf3 Links Ensembl NCBI GeneCards UniProt Show fit	chromosome 4 open reading frame 3
chr3_-_56468346 Show fit	0.16	ENST00000288221.11	ERC2 Links Ensembl NCBI GeneCards UniProt Show fit	ELKS/RAB6-interacting/CAST family member 2
chrX_+_71254781 Show fit	0.14	ENST00000677446.1	NONO Links Ensembl NCBI GeneCards UniProt Show fit	non-POU domain containing octamer binding
chr9_-_21482313 Show fit	0.14	ENST00000448696.4	IFNE Links Ensembl NCBI GeneCards UniProt Show fit	interferon epsilon
chr1_+_45012691 Show fit	0.14	ENST00000469548.5	UROD Links Ensembl NCBI GeneCards UniProt Show fit	uroporphyrinogen decarboxylase
chr16_-_89719369 Show fit	0.13	ENST00000561976.5	VPS9D1 Links Ensembl NCBI GeneCards UniProt Show fit	VPS9 domain containing 1
chr9_-_127873462 Show fit	0.13	ENST00000223836.10	AK1 Links Ensembl NCBI GeneCards UniProt Show fit	adenylate kinase 1
chr1_-_182672232 Show fit	0.13	ENST00000508450.5	RGS8 Links Ensembl NCBI GeneCards UniProt Show fit	regulator of G protein signaling 8
chr1_-_182400660 Show fit	0.12	ENST00000367565.2	TEDDM1 Links Ensembl NCBI GeneCards UniProt Show fit	transmembrane epididymal protein 1
chr7_+_142800957 Show fit	0.12	ENST00000466254.1	TRBC2 Links Ensembl NCBI GeneCards UniProt Show fit	T cell receptor beta constant 2
chrX_-_66033664 Show fit	0.12	ENST00000427538.5	VSIG4 Links Ensembl NCBI GeneCards UniProt Show fit	V-set and immunoglobulin domain containing 4
chr21_+_42403874 Show fit	0.12	ENST00000319294.11 ENST00000398367.1	UBASH3A Links Ensembl NCBI GeneCards UniProt Show fit	ubiquitin associated and SH3 domain containing A
chr2_+_227813834 Show fit	0.12	ENST00000358813.5 ENST00000409189.7	CCL20 Links Ensembl NCBI GeneCards UniProt Show fit	C-C motif chemokine ligand 20
chr12_+_8914525 Show fit	0.11	ENST00000543824.5	PHC1 Links Ensembl NCBI GeneCards UniProt Show fit	polyhomeotic homolog 1
chr7_+_143132069 Show fit	0.11	ENST00000291009.4	PIP Links Ensembl NCBI GeneCards UniProt Show fit	prolactin induced protein
chr5_+_150671588 Show fit	0.11	ENST00000523553.1	MYOZ3 Links Ensembl NCBI GeneCards UniProt Show fit	myozenin 3
chr12_-_123233097 Show fit	0.11	ENST00000541437.5 ENST00000606320.6	MPHOSPH9 Links Ensembl NCBI GeneCards UniProt Show fit	M-phase phosphoprotein 9
chr22_-_36817510 Show fit	0.10	ENST00000443735.1	PVALB Links Ensembl NCBI GeneCards UniProt Show fit	parvalbumin
chrX_-_71255060 Show fit	0.10	ENST00000373988.5 ENST00000373998.5	ZMYM3 Links Ensembl NCBI GeneCards UniProt Show fit	zinc finger MYM-type containing 3
chr2_+_169694434 Show fit	0.10	ENST00000616481.4 ENST00000616524.4 ENST00000617738.4 ENST00000359744.8 ENST00000438838.5 ENST00000438710.5 ENST00000449906.5 ENST00000498202.6 ENST00000272797.8	PHOSPHO2 Links Ensembl NCBI GeneCards UniProt Show fit KLHL23 Links Ensembl NCBI GeneCards UniProt Show fit	phosphatase, orphan 2 kelch like family member 23
chr11_+_7485492 Show fit	0.10	ENST00000534244.1 ENST00000329293.4	OLFML1 Links Ensembl NCBI GeneCards UniProt Show fit	olfactomedin like 1
chr5_-_59430600 Show fit	0.10	ENST00000636120.1	PDE4D Links Ensembl NCBI GeneCards UniProt Show fit	phosphodiesterase 4D
chr17_-_5234801 Show fit	0.10	ENST00000571800.5 ENST00000574081.6 ENST00000399600.8 ENST00000574297.1	SCIMP Links Ensembl NCBI GeneCards UniProt Show fit	SLP adaptor and CSK interacting membrane protein
chr19_+_49361783 Show fit	0.10	ENST00000594268.1	DKKL1 Links Ensembl NCBI GeneCards UniProt Show fit	dickkopf like acrosomal protein 1
chr17_-_3292600 Show fit	0.10	ENST00000615105.1	OR3A1 Links Ensembl NCBI GeneCards UniProt Show fit	olfactory receptor family 3 subfamily A member 1
chr16_+_31108294 Show fit	0.10	ENST00000287507.7 ENST00000394950.7 ENST00000219794.11 ENST00000561755.1	BCKDK Links Ensembl NCBI GeneCards UniProt Show fit	branched chain keto acid dehydrogenase kinase
chr5_+_123512087 Show fit	0.09	ENST00000345990.8	CSNK1G3 Links Ensembl NCBI GeneCards UniProt Show fit	casein kinase 1 gamma 3
chrX_-_19970298 Show fit	0.09	ENST00000379687.7 ENST00000379682.8	BCLAF3 Links Ensembl NCBI GeneCards UniProt Show fit	BCLAF1 and THRAP3 family member 3
chr1_+_148889403 Show fit	0.09	ENST00000464103.5 ENST00000534536.5 ENST00000369356.8 ENST00000369354.7 ENST00000369347.8 ENST00000369349.7 ENST00000369351.7	PDE4DIP Links Ensembl NCBI GeneCards UniProt Show fit	phosphodiesterase 4D interacting protein
chr1_+_53014926 Show fit	0.09	ENST00000430330.6 ENST00000408941.7 ENST00000478274.6 ENST00000484100.5 ENST00000435345.6 ENST00000488965.1	SCP2 Links Ensembl NCBI GeneCards UniProt Show fit	sterol carrier protein 2
chr10_-_49134021 Show fit	0.09	ENST00000311787.6	FAM170B Links Ensembl NCBI GeneCards UniProt Show fit	family with sequence similarity 170 member B
chr3_+_37990768 Show fit	0.09	ENST00000383759.7	VILL Links Ensembl NCBI GeneCards UniProt Show fit	villin like
chr2_+_161231078 Show fit	0.08	ENST00000439442.1	TANK Links Ensembl NCBI GeneCards UniProt Show fit	TRAF family member associated NFKB activator
chr21_+_44646414 Show fit	0.07	ENST00000334670.9	KRTAP10-11 Links Ensembl NCBI GeneCards UniProt Show fit	keratin associated protein 10-11
chr22_+_22811737 Show fit	0.07	ENST00000390315.3	IGLV3-10 Links Ensembl NCBI GeneCards UniProt Show fit	immunoglobulin lambda variable 3-10
chr11_-_60855943 Show fit	0.07	ENST00000332539.5	PTGDR2 Links Ensembl NCBI GeneCards UniProt Show fit	prostaglandin D2 receptor 2
chr4_-_82430192 Show fit	0.07	ENST00000621267.4 ENST00000614627.4	HNRNPDL Links Ensembl NCBI GeneCards UniProt Show fit	heterogeneous nuclear ribonucleoprotein D like
chr5_-_131994225 Show fit	0.06	ENST00000543479.5 ENST00000431707.5	ACSL6 Links Ensembl NCBI GeneCards UniProt Show fit	acyl-CoA synthetase long chain family member 6
chr1_-_182672882 Show fit	0.06	ENST00000367557.8 ENST00000258302.8	RGS8 Links Ensembl NCBI GeneCards UniProt Show fit	regulator of G protein signaling 8
chr13_-_23375431 Show fit	0.06	ENST00000683270.1 ENST00000684163.1 ENST00000402364.1 ENST00000683367.1	SACS Links Ensembl NCBI GeneCards UniProt Show fit	sacsin molecular chaperone
chr1_+_17580474 Show fit	0.06	ENST00000375415.5	ARHGEF10L Links Ensembl NCBI GeneCards UniProt Show fit	Rho guanine nucleotide exchange factor 10 like
chr1_+_48222685 Show fit	0.06	ENST00000533824.5 ENST00000236495.9 ENST00000438567.7	SLC5A9 Links Ensembl NCBI GeneCards UniProt Show fit	solute carrier family 5 member 9
chr1_-_152360004 Show fit	0.05	ENST00000388718.5	FLG2 Links Ensembl NCBI GeneCards UniProt Show fit	filaggrin family member 2
chr12_+_123233420 Show fit	0.05	ENST00000253233.6 ENST00000366329.7 ENST00000546132.2 ENST00000536130.2	C12orf65 Links Ensembl NCBI GeneCards UniProt Show fit	chromosome 12 open reading frame 65
chr16_+_28846674 Show fit	0.05	ENST00000322610.12	SH2B1 Links Ensembl NCBI GeneCards UniProt Show fit	SH2B adaptor protein 1
chr1_-_150697128 Show fit	0.05	ENST00000427665.1 ENST00000271732.8	GOLPH3L Links Ensembl NCBI GeneCards UniProt Show fit	golgi phosphoprotein 3 like
chrX_+_75274060 Show fit	0.05	ENST00000373383.9 ENST00000373379.5	UPRT Links Ensembl NCBI GeneCards UniProt Show fit	uracil phosphoribosyltransferase homolog
chr6_+_31587185 Show fit	0.04	ENST00000376092.7 ENST00000376086.7 ENST00000303757.12 ENST00000376093.6	LST1 Links Ensembl NCBI GeneCards UniProt Show fit	leukocyte specific transcript 1
chr2_-_2331336 Show fit	0.04	ENST00000648933.1 ENST00000644820.1	MYT1L Links Ensembl NCBI GeneCards UniProt Show fit	myelin transcription factor 1 like
chr2_-_2331225 Show fit	0.04	ENST00000648627.1 ENST00000649663.1 ENST00000650560.1 ENST00000428368.7 ENST00000648316.1 ENST00000648665.1 ENST00000649313.1 ENST00000399161.7 ENST00000647738.2	MYT1L Links Ensembl NCBI GeneCards UniProt Show fit	myelin transcription factor 1 like
chr17_-_50373173 Show fit	0.04	ENST00000225969.9 ENST00000503633.5 ENST00000442592.3	MRPL27 Links Ensembl NCBI GeneCards UniProt Show fit	mitochondrial ribosomal protein L27
chr6_+_31587268 Show fit	0.04	ENST00000396101.7 ENST00000490742.5	LST1 Links Ensembl NCBI GeneCards UniProt Show fit	leukocyte specific transcript 1
chr19_-_54100792 Show fit	0.03	ENST00000391761.5 ENST00000356532.7 ENST00000616447.4 ENST00000359649.8 ENST00000358375.8 ENST00000391760.1 ENST00000351806.8	OSCAR Links Ensembl NCBI GeneCards UniProt Show fit	osteoclast associated Ig-like receptor
chr1_-_155244684 Show fit	0.03	ENST00000428024.3	GBA Links Ensembl NCBI GeneCards UniProt Show fit	glucosylceramidase beta
chr14_+_75522427 Show fit	0.03	ENST00000286639.8	BATF Links Ensembl NCBI GeneCards UniProt Show fit	basic leucine zipper ATF-like transcription factor
chrX_-_41923547 Show fit	0.03	ENST00000378163.7	CASK Links Ensembl NCBI GeneCards UniProt Show fit	calcium/calmodulin dependent serine protein kinase
chr1_+_40709316 Show fit	0.03	ENST00000372652.5	NFYC Links Ensembl NCBI GeneCards UniProt Show fit	nuclear transcription factor Y subunit gamma
chr2_-_227379297 Show fit	0.03	ENST00000304568.4	TM4SF20 Links Ensembl NCBI GeneCards UniProt Show fit	transmembrane 4 L six family member 20
chr9_-_6015607 Show fit	0.03	ENST00000485372.1 ENST00000259569.6 ENST00000623170.1	RANBP6 Links Ensembl NCBI GeneCards UniProt Show fit	RAN binding protein 6
chr6_+_6588082 Show fit	0.03	ENST00000379953.6	LY86 Links Ensembl NCBI GeneCards UniProt Show fit	lymphocyte antigen 86
chr7_+_133253064 Show fit	0.03	ENST00000393161.6 ENST00000253861.5	EXOC4 Links Ensembl NCBI GeneCards UniProt Show fit	exocyst complex component 4
chr2_-_89143133 Show fit	0.02	ENST00000492167.1	IGKV3-20 Links Ensembl NCBI GeneCards UniProt Show fit	immunoglobulin kappa variable 3-20
chr1_-_150236150 Show fit	0.02	ENST00000629042.2	ANP32E Links Ensembl NCBI GeneCards UniProt Show fit	acidic nuclear phosphoprotein 32 family member E
chr12_-_14938508 Show fit	0.02	ENST00000266397.7	ERP27 Links Ensembl NCBI GeneCards UniProt Show fit	endoplasmic reticulum protein 27
chr12_-_122422662 Show fit	0.02	ENST00000620786.5	CLIP1 Links Ensembl NCBI GeneCards UniProt Show fit	CAP-Gly domain containing linker protein 1
chr11_-_31803620 Show fit	0.02	ENST00000639006.1	PAX6 Links Ensembl NCBI GeneCards UniProt Show fit	paired box 6
chr1_-_150236064 Show fit	0.02	ENST00000532744.2 ENST00000369114.9 ENST00000369115.3 ENST00000583931.6	ANP32E Links Ensembl NCBI GeneCards UniProt Show fit	acidic nuclear phosphoprotein 32 family member E
chr11_-_31803663 Show fit	0.01	ENST00000638802.1 ENST00000638878.1	PAX6 Links Ensembl NCBI GeneCards UniProt Show fit	paired box 6
chr1_-_150235972 Show fit	0.01	ENST00000534220.1	ANP32E Links Ensembl NCBI GeneCards UniProt Show fit	acidic nuclear phosphoprotein 32 family member E
chr19_-_51372269 Show fit	0.01	ENST00000593572.5 ENST00000595157.1	NKG7 Links Ensembl NCBI GeneCards UniProt Show fit	natural killer cell granule protein 7
chr5_+_80035341 Show fit	0.01	ENST00000350881.6	THBS4 Links Ensembl NCBI GeneCards UniProt Show fit	thrombospondin 4
chr4_+_155666963 Show fit	0.01	ENST00000455639.6	GUCY1A1 Links Ensembl NCBI GeneCards UniProt Show fit	guanylate cyclase 1 soluble subunit alpha 1
chr3_+_111542134 Show fit	0.00	ENST00000438817.6	CD96 Links Ensembl NCBI GeneCards UniProt Show fit	CD96 molecule
chr17_+_42853232 Show fit	0.00	ENST00000617500.4	AOC3 Links Ensembl NCBI GeneCards UniProt Show fit	amine oxidase copper containing 3
chr3_-_48563774 Show fit	0.00	ENST00000273610.4	UCN2 Links Ensembl NCBI GeneCards UniProt Show fit	urocortin 2
chr1_-_150235943 Show fit	0.00	ENST00000533654.5	ANP32E Links Ensembl NCBI GeneCards UniProt Show fit	acidic nuclear phosphoprotein 32 family member E
chr1_+_155135807 Show fit	0.00	ENST00000368401.6 ENST00000622581.4	SLC50A1 Links Ensembl NCBI GeneCards UniProt Show fit	solute carrier family 50 member 1
chr1_-_150235995 Show fit	0.00	ENST00000436748.6	ANP32E Links Ensembl NCBI GeneCards UniProt Show fit	acidic nuclear phosphoprotein 32 family member E

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.8	GO:0048251	elastic fiber assembly(GO:0048251)
0.0	0.1	GO:0045362	regulation of interleukin-1 biosynthetic process(GO:0045360) positive regulation of interleukin-1 biosynthetic process(GO:0045362)
0.0	0.7	GO:0050884	neuromuscular process controlling posture(GO:0050884)
0.0	1.0	GO:0051560	mitochondrial calcium ion homeostasis(GO:0051560)
0.0	0.1	GO:2000255	negative regulation of male germ cell proliferation(GO:2000255)
0.0	0.1	GO:0080154	regulation of fertilization(GO:0080154)
0.0	0.1	GO:1903377	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903377)
0.0	0.1	GO:2000158	positive regulation of ubiquitin-specific protease activity(GO:2000158)
0.0	0.1	GO:0032383	regulation of intracellular lipid transport(GO:0032377) regulation of intracellular sterol transport(GO:0032380) regulation of intracellular cholesterol transport(GO:0032383)
0.0	0.0	GO:1901805	beta-glucoside metabolic process(GO:1901804) beta-glucoside catabolic process(GO:1901805) positive regulation of neuronal action potential(GO:1904457)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	1.8	GO:0071953	elastic fiber(GO:0071953)
0.0	0.2	GO:0005862	muscle thin filament tropomyosin(GO:0005862)
0.0	0.1	GO:0002081	outer acrosomal membrane(GO:0002081)
0.0	0.1	GO:0005947	mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)
0.0	0.1	GO:0042382	paraspeckles(GO:0042382)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0031731	CCR6 chemokine receptor binding(GO:0031731)
0.0	0.1	GO:0004853	uroporphyrinogen decarboxylase activity(GO:0004853)
0.0	0.1	GO:0070538	oleic acid binding(GO:0070538)
0.0	0.1	GO:0004958	prostaglandin F receptor activity(GO:0004958)
0.0	0.1	GO:0051373	FATZ binding(GO:0051373)
0.0	0.1	GO:0035800	deubiquitinase activator activity(GO:0035800)
0.0	1.0	GO:0015485	cholesterol binding(GO:0015485)
0.0	0.3	GO:0005528	macrolide binding(GO:0005527) FK506 binding(GO:0005528)