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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G06180

Z-value: 0.64

Transcription factors associated with AT1G06180

Gene Symbol Gene ID Gene Info
AT1G06180
AT1G06180 myb domain protein 13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB13arTal_v1_Chr1_+_1889362_1889362-0.144.9e-01Click!

Activity profile of AT1G06180 motif

Sorted Z-values of AT1G06180 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_+_14215473_14215473 1.30 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_+_4488476_4488476 1.28 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
arTal_v1_Chr1_-_20648891_20648891 1.26 AT1G55330.1
AGP21
arabinogalactan protein 21
arTal_v1_Chr2_-_17827648_17827648 1.20 AT2G42840.1
PDF1
protodermal factor 1
arTal_v1_Chr3_-_8589754_8589754 1.19 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr5_+_18528267_18528267 1.18 AT5G45670.1
AT5G45670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_-_9062093_9062093 1.17 AT2G21140.1
PRP2
proline-rich protein 2
arTal_v1_Chr3_-_7796310_7796460 1.08 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
arTal_v1_Chr4_+_14304921_14304921 1.05 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
arTal_v1_Chr1_+_27452748_27452766 0.99 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr2_+_8940833_8940833 0.95 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
arTal_v1_Chr2_-_14322082_14322082 0.94 AT2G33850.1
AT2G33850
E6-like protein
arTal_v1_Chr5_+_1563286_1563308 0.92 AT5G05270.1
AT5G05270.2
CHIL
Chalcone-flavanone isomerase family protein
arTal_v1_Chr5_-_671687_671687 0.92 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
arTal_v1_Chr4_+_18291218_18291218 0.88 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
arTal_v1_Chr1_-_22317070_22317070 0.87 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_6399621_6399621 0.87 AT2G14890.2
AGP9
arabinogalactan protein 9
arTal_v1_Chr1_-_1063809_1063809 0.82 AT1G04110.1
SDD1
Subtilase family protein
arTal_v1_Chr2_+_6399405_6399405 0.81 AT2G14890.1
AGP9
arabinogalactan protein 9
arTal_v1_Chr1_+_16575759_16575759 0.78 AT1G43790.1
TED6
tracheary element differentiation-related 6
arTal_v1_Chr4_-_10278794_10278794 0.76 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_17918207_17918207 0.75 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr1_-_3518035_3518035 0.74 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_15445294_15445294 0.74 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
arTal_v1_Chr3_+_3012094_3012094 0.71 AT3G09820.2
ADK1
adenosine kinase 1
arTal_v1_Chr3_+_3011780_3011780 0.68 AT3G09820.1
ADK1
adenosine kinase 1
arTal_v1_Chr5_-_6112039_6112039 0.67 AT5G18430.1
AT5G18430
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_-_373805_373805 0.67 AT3G02110.1
scpl25
serine carboxypeptidase-like 25
arTal_v1_Chr1_-_11548016_11548016 0.67 AT1G32100.1
PRR1
pinoresinol reductase 1
arTal_v1_Chr3_+_19713799_19713799 0.67 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
arTal_v1_Chr3_+_1258519_1258546 0.66 AT3G04630.2
AT3G04630.1
WDL1
WVD2-like 1
arTal_v1_Chr4_-_9133161_9133161 0.65 AT4G16141.1
AT4G16141
GATA type zinc finger transcription factor family protein
arTal_v1_Chr1_+_9259750_9259750 0.65 AT1G26770.2
EXPA10
expansin A10
arTal_v1_Chr2_-_15560755_15560755 0.65 AT2G37040.1
PAL1
PHE ammonia lyase 1
arTal_v1_Chr3_-_197564_197564 0.64 AT3G01500.4
CA1
carbonic anhydrase 1
arTal_v1_Chr1_+_9259432_9259432 0.63 AT1G26770.1
EXPA10
expansin A10
arTal_v1_Chr5_-_6842946_6842946 0.63 AT5G20270.1
HHP1
heptahelical transmembrane protein1
arTal_v1_Chr2_+_7301334_7301334 0.61 AT2G16850.1
PIP2%3B8
plasma membrane intrinsic protein 2;8
arTal_v1_Chr3_+_18049571_18049571 0.61 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
arTal_v1_Chr1_+_23911024_23911024 0.61 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr3_-_198160_198160 0.60 AT3G01500.2
CA1
carbonic anhydrase 1
arTal_v1_Chr3_-_197974_197974 0.60 AT3G01500.1
CA1
carbonic anhydrase 1
arTal_v1_Chr1_-_8235019_8235019 0.60 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_-_198664_198664 0.60 AT3G01500.3
CA1
carbonic anhydrase 1
arTal_v1_Chr2_-_12785037_12785037 0.60 AT2G29980.2
FAD3
fatty acid desaturase 3
arTal_v1_Chr3_+_1258830_1258830 0.60 AT3G04630.3
WDL1
WVD2-like 1
arTal_v1_Chr4_+_7758275_7758275 0.60 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_-_26129547_26129547 0.59 AT5G65390.1
AGP7
arabinogalactan protein 7
arTal_v1_Chr2_-_12785190_12785190 0.59 AT2G29980.1
FAD3
fatty acid desaturase 3
arTal_v1_Chr2_-_18914739_18914739 0.59 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
arTal_v1_Chr4_-_8188811_8188811 0.58 AT4G14200.1
AT4G14200
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr2_-_5675995_5675995 0.58 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
arTal_v1_Chr3_+_20780175_20780175 0.58 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
arTal_v1_Chr2_-_17161293_17161294 0.58 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
arTal_v1_Chr3_+_251868_251868 0.57 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
arTal_v1_Chr4_+_620691_620697 0.57 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_-_24171502_24171635 0.57 AT1G65060.2
AT1G65060.1
4CL3
4-coumarate:CoA ligase 3
arTal_v1_Chr3_-_6980523_6980523 0.57 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_+_17527167_17527167 0.56 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
arTal_v1_Chr1_+_18290942_18290979 0.56 AT1G49430.1
AT1G49430.2
LACS2
long-chain acyl-CoA synthetase 2
arTal_v1_Chr2_-_9224432_9224496 0.55 AT2G21540.2
AT2G21540.3
AT2G21540.4
AT2G21540.5
SFH3
SEC14-like 3
arTal_v1_Chr4_-_17777445_17777445 0.54 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
arTal_v1_Chr5_+_5038563_5038563 0.53 AT5G15530.1
BCCP2
biotin carboxyl carrier protein 2
arTal_v1_Chr5_+_20303334_20303334 0.52 AT5G49910.1
cpHsc70-2
chloroplast heat shock protein 70-2
arTal_v1_Chr1_+_22444307_22444307 0.52 AT1G60950.1
FED A
2Fe-2S ferredoxin-like superfamily protein
arTal_v1_Chr3_-_19821505_19821519 0.52 AT3G53460.1
AT3G53460.2
AT3G53460.3
AT3G53460.4
CP29
chloroplast RNA-binding protein 29
arTal_v1_Chr2_+_19534473_19534503 0.52 AT2G47630.1
AT2G47630.2
AT2G47630
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_-_13958107_13958107 0.51 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_20301759_20301759 0.51 AT3G54820.1
PIP2%3B5
plasma membrane intrinsic protein 2;5
arTal_v1_Chr5_-_24987811_24987811 0.50 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
arTal_v1_Chr5_+_7529292_7529357 0.50 AT5G22640.3
AT5G22640.1
AT5G22640.2
emb1211
MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
arTal_v1_Chr4_-_18080083_18080228 0.49 AT4G38710.2
AT4G38710.1
AT4G38710
glycine-rich protein
arTal_v1_Chr5_-_20510810_20510810 0.49 AT5G50370.1
AT5G50370.2
AT5G50370
Adenylate kinase family protein
arTal_v1_Chr5_-_345457_345457 0.48 AT5G01890.1
AT5G01890
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr4_+_2449434_2449434 0.48 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
arTal_v1_Chr3_-_3513379_3513379 0.47 AT3G11210.1
AT3G11210
SGNH hydrolase-type esterase superfamily protein
arTal_v1_Chr3_+_5116021_5116021 0.47 AT3G15190.1
PRPS20
chloroplast 30S ribosomal protein S20
arTal_v1_Chr2_+_18145439_18145439 0.47 AT2G43800.1
AT2G43800
Actin-binding FH2 (formin homology 2) family protein
arTal_v1_Chr4_+_10069458_10069458 0.47 AT4G18195.1
PUP8
purine permease 8
arTal_v1_Chr1_-_26515188_26515255 0.47 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr4_-_9715648_9715648 0.46 AT4G17390.1
AT4G17390
Ribosomal protein L23/L15e family protein
arTal_v1_Chr2_+_19535143_19535143 0.46 AT2G47630.3
AT2G47630
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_-_17040127_17040204 0.46 AT2G40820.2
AT2G40820.1
AT2G40820.3
AT2G40820.5
AT2G40820
stomatal closure actin-binding-like protein
arTal_v1_Chr5_-_5741500_5741500 0.46 AT5G17420.1
IRX3
Cellulose synthase family protein
arTal_v1_Chr3_+_957112_957123 0.46 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
arTal_v1_Chr5_+_7676938_7676938 0.45 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
arTal_v1_Chr3_+_2612175_2612175 0.45 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)
arTal_v1_Chr3_+_956862_956862 0.45 AT3G03780.2
MS2
methionine synthase 2
arTal_v1_Chr5_-_7890180_7890180 0.45 AT5G23420.2
HMGB6
high-mobility group box 6
arTal_v1_Chr3_+_22798984_22798984 0.45 AT3G61610.1
AT3G61610.2
AT3G61610
Galactose mutarotase-like superfamily protein
arTal_v1_Chr5_+_23144947_23144947 0.45 AT5G57130.1
AT5G57130
Clp amino terminal domain-containing protein
arTal_v1_Chr2_+_19394106_19394106 0.44 AT2G47240.4
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr2_+_19393584_19393584 0.44 AT2G47240.3
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr5_+_26462506_26462506 0.44 AT5G66230.1
AT5G66230
Chalcone-flavanone isomerase family protein
arTal_v1_Chr1_+_12026936_12026936 0.44 AT1G33170.1
AT1G33170
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_-_9719594_9719594 0.44 AT2G22810.1
ACS4
1-aminocyclopropane-1-carboxylate synthase 4
arTal_v1_Chr3_+_8586359_8586359 0.44 AT3G23805.1
RALFL24
ralf-like 24
arTal_v1_Chr2_-_15955752_15955752 0.44 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
arTal_v1_Chr2_+_10072057_10072057 0.43 AT2G23690.1
AT2G23690
HTH-type transcriptional regulator
arTal_v1_Chr1_-_9890875_9891015 0.43 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31
arTal_v1_Chr3_-_7984833_7984833 0.43 AT3G22540.1
AT3G22540
hypothetical protein (DUF1677)
arTal_v1_Chr1_+_13208683_13208683 0.43 AT1G35680.1
RPL21C
Ribosomal protein L21
arTal_v1_Chr2_-_12338836_12338933 0.43 AT2G28760.3
AT2G28760.1
AT2G28760.4
UXS6
UDP-XYL synthase 6
arTal_v1_Chr5_+_7676662_7676662 0.43 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
arTal_v1_Chr5_-_7890355_7890355 0.43 AT5G23420.1
HMGB6
high-mobility group box 6
arTal_v1_Chr5_-_21068327_21068327 0.43 AT5G51820.1
PGM
phosphoglucomutase
arTal_v1_Chr4_+_13133402_13133402 0.43 AT4G25830.1
AT4G25830
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_+_19392744_19392744 0.42 AT2G47240.2
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr5_+_5935038_5935157 0.42 AT5G17920.1
AT5G17920.2
ATMS1
Cobalamin-independent synthase family protein
arTal_v1_Chr1_-_4053871_4053871 0.42 AT1G12000.1
AT1G12000
Phosphofructokinase family protein
arTal_v1_Chr2_+_19392497_19392497 0.42 AT2G47240.1
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr5_+_25432890_25432890 0.42 AT5G63530.1
FP3
farnesylated protein 3
arTal_v1_Chr3_-_18126638_18126742 0.42 AT3G48870.4
AT3G48870.3
AT3G48870.1
AT3G48870.2
HSP93-III
Clp ATPase
arTal_v1_Chr5_+_25433266_25433266 0.41 AT5G63530.2
FP3
farnesylated protein 3
arTal_v1_Chr3_-_21760390_21760390 0.41 AT3G58850.1
PAR2
phy rapidly regulated 2
arTal_v1_Chr3_-_21156075_21156075 0.41 AT3G57150.1
NAP57
homologue of NAP57
arTal_v1_Chr4_-_8050157_8050157 0.40 AT4G13930.1
SHM4
serine hydroxymethyltransferase 4
arTal_v1_Chr1_+_3284073_3284239 0.40 AT1G10060.5
AT1G10060.4
AT1G10060.6
AT1G10060.7
AT1G10060.1
AT1G10060.2
BCAT-1
branched-chain amino acid transaminase 1
arTal_v1_Chr2_-_18129841_18129841 0.40 AT2G43745.1
AT2G43745
jacalin lectin-like protein
arTal_v1_Chr3_+_5708826_5708826 0.40 AT3G16780.1
AT3G16780
Ribosomal protein L19e family protein
arTal_v1_Chr5_+_16468327_16468344 0.40 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
arTal_v1_Chr5_-_22649517_22649517 0.40 AT5G55920.1
OLI2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_+_26236964_26237055 0.40 AT5G65640.1
AT5G65640.2
bHLH093
beta HLH protein 93
arTal_v1_Chr1_-_3694200_3694200 0.39 AT1G11070.4
AT1G11070.2
AT1G11070.3
AT1G11070
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_19747114_19747114 0.39 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
arTal_v1_Chr5_-_20236195_20236329 0.39 AT5G49800.2
AT5G49800.1
AT5G49800
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr4_-_6023852_6023852 0.39 AT4G09510.2
CINV2
cytosolic invertase 2
arTal_v1_Chr4_-_6024042_6024042 0.39 AT4G09510.1
CINV2
cytosolic invertase 2
arTal_v1_Chr4_-_12339967_12339967 0.38 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr5_+_26061165_26061165 0.38 AT5G65220.1
AT5G65220
Ribosomal L29 family protein
arTal_v1_Chr4_-_9331646_9331646 0.38 AT4G16563.1
AT4G16563
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_+_21261046_21261046 0.38 AT3G57450.1
AT3G57450
hypothetical protein
arTal_v1_Chr1_-_27244931_27244931 0.37 AT1G72370.1
AT1G72370.2
P40
40s ribosomal protein SA
arTal_v1_Chr3_+_20547661_20547661 0.37 AT3G55420.1
AT3G55420
hypothetical protein
arTal_v1_Chr3_-_17298207_17298222 0.37 AT3G46960.2
AT3G46960.3
AT3G46960.1
AT3G46960
RNA helicase, ATP-dependent, SK12/DOB1 protein
arTal_v1_Chr2_-_16950705_16950705 0.37 AT2G40610.1
EXPA8
expansin A8
arTal_v1_Chr1_-_6579314_6579314 0.37 AT1G19050.1
ARR7
response regulator 7
arTal_v1_Chr4_+_12527675_12527675 0.37 AT4G24130.1
AT4G24130
DUF538 family protein (Protein of unknown function, DUF538)
arTal_v1_Chr5_+_568425_568425 0.36 AT5G02540.1
AT5G02540
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_+_3203988_3203988 0.36 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
arTal_v1_Chr5_-_23124513_23124594 0.36 AT5G57120.1
AT5G57120.2
AT5G57120
nucleolar/coiled-body phosphoprotein
arTal_v1_Chr3_+_23384988_23384988 0.36 AT3G63300.1
AT3G63300.2
FKD1
FORKED 1
arTal_v1_Chr5_+_26461152_26461177 0.36 AT5G66230.2
AT5G66220.1
AT5G66230
AT5G66220
Chalcone-flavanone isomerase family protein
Chalcone-flavanone isomerase family protein
arTal_v1_Chr1_+_10814612_10814612 0.36 AT1G30530.1
UGT78D1
UDP-glucosyl transferase 78D1
arTal_v1_Chr4_+_7962428_7962430 0.36 AT4G13710.1
AT4G13710.2
AT4G13710
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_12156022_12156022 0.36 AT2G28410.1
AT2G28410
transmembrane protein
arTal_v1_Chr1_+_4247218_4247249 0.35 AT1G12460.1
AT1G12460.2
AT1G12460
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_+_9942915_9942915 0.35 AT2G23350.1
PAB4
poly(A) binding protein 4
arTal_v1_Chr5_-_23917873_23917998 0.35 AT5G59290.3
AT5G59290.2
UXS3
UDP-glucuronic acid decarboxylase 3
arTal_v1_Chr2_+_19109513_19109513 0.35 AT2G46535.1
AT2G46535
hypothetical protein
arTal_v1_Chr1_-_3693572_3693648 0.35 AT1G11070.5
AT1G11070.1
AT1G11070
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_10321011_10321011 0.35 AT1G29500.1
AT1G29500
SAUR-like auxin-responsive protein family
arTal_v1_Chr3_-_19629204_19629204 0.35 AT3G52930.1
FBA8
Aldolase superfamily protein
arTal_v1_Chr2_-_17464242_17464242 0.35 AT2G41850.1
PGAZAT
polygalacturonase ADPG2-like protein
arTal_v1_Chr5_+_17697842_17697875 0.35 AT5G43990.4
AT5G43990.10
AT5G43990.7
AT5G43990.6
AT5G43990.1
AT5G43990.11
AT5G43990.9
AT5G43990.8
AT5G43990.17
AT5G43990.13
AT5G43990.12
AT5G43990.15
AT5G43990.16
AT5G43990.14
AT5G43990.3
AT5G43990.2
SUVR2
SET-domain containing protein lysine methyltransferase family protein
arTal_v1_Chr3_+_7306180_7306180 0.35 AT3G20860.1
NEK5
Serine/Threonine kinase catalytic domain protein
arTal_v1_Chr5_-_5137707_5137707 0.35 AT5G15740.1
AT5G15740
O-fucosyltransferase family protein
arTal_v1_Chr5_+_19701728_19701877 0.34 AT5G48600.2
AT5G48600.1
SMC3
structural maintenance of chromosome 3
arTal_v1_Chr2_-_17837618_17837618 0.34 AT2G42870.1
PAR1
phy rapidly regulated 1
arTal_v1_Chr1_+_8143227_8143312 0.34 AT1G23000.1
AT1G23000.2
AT1G23000
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr2_-_9223946_9223946 0.34 AT2G21540.6
SFH3
SEC14-like 3
arTal_v1_Chr1_-_7040231_7040231 0.34 AT1G20330.1
SMT2
sterol methyltransferase 2
arTal_v1_Chr5_-_10455681_10455807 0.34 AT5G28490.1
AT5G28491.1
LSH1
AT5G28491
LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
hypothetical protein
arTal_v1_Chr3_-_1010573_1010573 0.34 AT3G03920.1
AT3G03920
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
arTal_v1_Chr3_+_22151164_22151221 0.34 AT3G59970.3
AT3G59970.2
AT3G59970.1
MTHFR1
methylenetetrahydrofolate reductase 1
arTal_v1_Chr4_-_15022445_15022505 0.34 AT4G30850.2
AT4G30850.1
HHP2
heptahelical transmembrane protein2
arTal_v1_Chr1_-_22391165_22391237 0.34 AT1G60810.2
AT1G60810.1
ACLA-2
ATP-citrate lyase A-2
arTal_v1_Chr1_-_3272110_3272110 0.33 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
arTal_v1_Chr3_-_6044504_6044609 0.33 AT3G17680.2
AT3G17680.1
AT3G17680
Kinase interacting (KIP1-like) family protein
arTal_v1_Chr1_+_26727555_26727555 0.33 AT1G70895.2
AT1G70895.1
CLE17
CLAVATA3/ESR-RELATED 17
arTal_v1_Chr1_-_6999839_6999839 0.33 AT1G20190.1
EXPA11
expansin 11
arTal_v1_Chr1_-_4217412_4217412 0.33 AT1G12380.1
AT1G12380
hypothetical protein
arTal_v1_Chr2_-_9224152_9224152 0.33 AT2G21540.1
SFH3
SEC14-like 3
arTal_v1_Chr5_-_18899646_18899646 0.33 AT5G46580.1
AT5G46580
pentatricopeptide (PPR) repeat-containing protein
arTal_v1_Chr3_-_7808046_7808046 0.33 AT3G22142.1
AT3G22142
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_23918266_23918267 0.33 AT5G59290.1
AT5G59290.4
UXS3
UDP-glucuronic acid decarboxylase 3
arTal_v1_Chr1_+_3981153_3981248 0.33 AT1G11790.1
AT1G11790.2
ADT1
arogenate dehydratase 1
arTal_v1_Chr4_+_10231218_10231218 0.32 AT4G18570.2
AT4G18570.1
AT4G18570
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_9480746_9480839 0.32 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
arTal_v1_Chr2_+_18677311_18677311 0.32 AT2G45300.4
AT2G45300.3
AT2G45300.2
AT2G45300.1
AT2G45300
RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
arTal_v1_Chr2_+_15645407_15645491 0.32 AT2G37260.2
AT2G37260.3
TTG2
WRKY family transcription factor family protein
arTal_v1_Chr1_-_17957719_17957719 0.32 AT1G48570.1
AT1G48570
zinc finger (Ran-binding) family protein
arTal_v1_Chr2_+_17582673_17582692 0.32 AT2G42190.2
AT2G42190.1
AT2G42190.3
AT2G42190
rho GTPase-activating gacO-like protein
arTal_v1_Chr5_-_7560190_7560190 0.32 AT5G22740.1
CSLA02
cellulose synthase-like A02
arTal_v1_Chr1_-_6421188_6421188 0.32 AT1G18650.1
AT1G18650.2
PDCB3
plasmodesmata callose-binding protein 3
arTal_v1_Chr2_+_8183638_8183638 0.32 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
arTal_v1_Chr4_-_15664948_15665032 0.32 AT4G32460.2
AT4G32460.1
AT4G32460.3
AT4G32460
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr4_+_18053360_18053360 0.32 AT4G38620.1
MYB4
myb domain protein 4
arTal_v1_Chr2_+_17446744_17446744 0.32 AT2G41820.1
AT2G41820
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_25374072_25374222 0.31 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
arTal_v1_Chr2_-_7145345_7145424 0.31 AT2G16485.1
AT2G16485.2
NERD
GW repeat- and PHD finger-containing protein NERD
arTal_v1_Chr5_-_5642623_5642623 0.31 AT5G17160.1
AT5G17160
aspartic/glutamic acid-rich protein
arTal_v1_Chr2_+_9792166_9792212 0.31 AT2G23000.2
AT2G23000.1
scpl10
serine carboxypeptidase-like 10
arTal_v1_Chr5_-_16061043_16061043 0.31 AT5G40150.1
AT5G40150
Peroxidase superfamily protein
arTal_v1_Chr4_-_17672353_17672353 0.31 AT4G37610.1
BT5
BTB and TAZ domain protein 5
arTal_v1_Chr5_+_8058568_8058580 0.31 AT5G23890.2
AT5G23890.1
AT5G23890
GPI-anchored adhesin-like protein
arTal_v1_Chr1_-_6999523_6999523 0.31 AT1G20190.2
EXPA11
expansin 11
arTal_v1_Chr1_-_29485389_29485389 0.30 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
arTal_v1_Chr4_-_17550257_17550257 0.30 AT4G37290.1
AT4G37290
transmembrane protein
arTal_v1_Chr5_+_18530834_18530834 0.30 AT5G45680.1
FKBP13
FK506-binding protein 13

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G06180

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.3 1.2 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.3 0.3 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 0.7 GO:0015840 urea transport(GO:0015840)
0.2 0.9 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.2 1.0 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.2 2.6 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.2 1.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.9 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.2 1.4 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.4 GO:0009590 detection of gravity(GO:0009590)
0.1 2.7 GO:0006949 syncytium formation(GO:0006949)
0.1 0.4 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 0.3 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 1.1 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.1 0.3 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.5 GO:0051318 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.1 GO:0046655 folic acid metabolic process(GO:0046655)
0.1 0.4 GO:0042256 mature ribosome assembly(GO:0042256)
0.1 0.5 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.6 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.4 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.3 GO:1900912 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.1 0.4 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.1 2.8 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.7 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.2 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 0.2 GO:0080051 cutin transport(GO:0080051)
0.1 0.2 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.7 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.5 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.5 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.9 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 0.2 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.1 0.3 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 1.2 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.3 GO:0042144 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.1 0.2 GO:0090392 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.6 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 0.2 GO:0009270 response to humidity(GO:0009270)
0.1 0.6 GO:0010088 phloem development(GO:0010088)
0.1 0.2 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.6 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.3 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.1 0.3 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 0.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.2 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.3 GO:0031507 leading strand elongation(GO:0006272) heterochromatin assembly(GO:0031507)
0.0 1.1 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.4 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 1.5 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.6 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.1 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 1.7 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.3 GO:0031335 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.2 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.0 0.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.6 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.1 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.0 0.2 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.0 0.2 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.7 GO:0009641 shade avoidance(GO:0009641)
0.0 0.3 GO:0019079 viral genome replication(GO:0019079)
0.0 0.0 GO:0048455 stamen formation(GO:0048455)
0.0 0.4 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.2 GO:0015675 nickel cation transport(GO:0015675)
0.0 0.2 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.2 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.1 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.2 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.0 0.3 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.2 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
0.0 0.2 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.0 0.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.1 GO:0032418 lysosome localization(GO:0032418)
0.0 0.7 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.4 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.2 GO:0010236 photosynthetic electron transport in photosystem II(GO:0009772) plastoquinone biosynthetic process(GO:0010236)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.3 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 1.5 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.7 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.3 GO:0032776 DNA methylation on cytosine(GO:0032776)
0.0 2.0 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.0 0.2 GO:0006567 threonine catabolic process(GO:0006567)
0.0 0.9 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 1.0 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.4 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.6 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.1 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.2 GO:0009799 specification of symmetry(GO:0009799)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.0 0.1 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.3 GO:0006450 regulation of translational fidelity(GO:0006450)
0.0 0.3 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.2 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 1.0 GO:0009132 nucleoside diphosphate metabolic process(GO:0009132)
0.0 0.2 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 1.3 GO:0009808 lignin metabolic process(GO:0009808)
0.0 0.1 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.0 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.4 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.1 GO:0070207 protein homotrimerization(GO:0070207)
0.0 1.2 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 0.2 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.1 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.2 GO:1902025 nitrate import(GO:1902025)
0.0 1.5 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.2 GO:0070370 cellular heat acclimation(GO:0070370)
0.0 0.3 GO:0006265 DNA topological change(GO:0006265)
0.0 0.3 GO:0030855 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.2 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.8 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.0 0.1 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 0.1 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.3 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.5 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.0 0.5 GO:0099515 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0006529 asparagine biosynthetic process(GO:0006529)
0.0 0.9 GO:0009744 response to sucrose(GO:0009744)
0.0 0.0 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.2 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.2 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.1 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.0 0.5 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.0 0.9 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.2 GO:0010274 hydrotropism(GO:0010274)
0.0 1.2 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.2 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.2 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.0 0.9 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.1 GO:0015846 polyamine transport(GO:0015846)
0.0 0.3 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.0 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.0 0.1 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 0.1 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.2 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.2 GO:0046688 response to copper ion(GO:0046688)
0.0 0.6 GO:0016125 sterol metabolic process(GO:0016125)
0.0 0.1 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.2 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.0 0.1 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.3 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 0.1 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.2 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 0.7 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 0.9 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 0.7 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.5 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.3 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 2.8 GO:0010319 stromule(GO:0010319)
0.1 0.7 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.3 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 0.1 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.3 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.2 GO:0042788 polysomal ribosome(GO:0042788)
0.0 0.2 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778) kinetochore microtubule(GO:0005828)
0.0 0.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.1 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 6.1 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 0.3 GO:0045298 tubulin complex(GO:0045298)
0.0 0.1 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 4.8 GO:0048046 apoplast(GO:0048046)
0.0 0.2 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 3.3 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.0 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.1 GO:0009538 photosystem I reaction center(GO:0009538)
0.0 0.0 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 3.3 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.2 GO:0016459 myosin complex(GO:0016459)
0.0 1.1 GO:0015935 small ribosomal subunit(GO:0015935)
0.0 0.1 GO:0030286 dynein complex(GO:0030286)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.4 1.3 GO:0045430 chalcone isomerase activity(GO:0045430)
0.4 1.2 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.4 1.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.3 1.4 GO:0004001 adenosine kinase activity(GO:0004001)
0.3 1.3 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.2 1.0 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.2 0.7 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 0.7 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 0.5 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.2 0.7 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.5 GO:0009374 biotin binding(GO:0009374)
0.2 0.5 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.6 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 1.4 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.4 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.1 0.1 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.4 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.3 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 0.3 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.6 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 1.9 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 1.2 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 1.2 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.7 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.2 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 0.3 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 1.0 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.4 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.3 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 0.3 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.1 0.6 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 2.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.3 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.5 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.3 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.2 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.1 0.2 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.7 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.5 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.4 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.2 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.1 0.2 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.6 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.4 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.5 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.1 GO:0004359 glutaminase activity(GO:0004359)
0.0 0.3 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.2 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.5 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 1.1 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.3 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 2.7 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.4 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.2 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.0 0.2 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.0 0.2 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.5 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.2 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 0.3 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.5 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.2 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.2 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.0 0.3 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.5 GO:0004312 fatty acid synthase activity(GO:0004312)
0.0 0.3 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.0 0.3 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.9 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.4 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.2 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.3 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.9 GO:0005179 hormone activity(GO:0005179)
0.0 0.3 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.2 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.2 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.2 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.1 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.0 0.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.2 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.1 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.0 0.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.3 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.3 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.6 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.2 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.1 GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity(GO:0050362) L-tryptophan aminotransferase activity(GO:0070529) L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.3 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.9 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.2 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.5 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.3 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.3 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.2 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.2 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.6 GO:0008483 transaminase activity(GO:0008483)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.9 GO:0043621 protein self-association(GO:0043621)
0.0 0.1 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0015301 anion:anion antiporter activity(GO:0015301)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.0 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.5 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 1.3 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.4 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.0 0.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.1 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.0 0.1 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.0 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)
0.0 0.3 GO:0004565 beta-galactosidase activity(GO:0004565)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.5 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.6 PID ATM PATHWAY ATM pathway
0.0 0.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.3 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.2 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.1 PID CXCR4 PATHWAY CXCR4-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.4 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.7 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.3 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.3 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.1 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.0 0.2 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.2 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination