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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G29860

Z-value: 0.70

Transcription factors associated with AT1G29860

Gene Symbol Gene ID Gene Info
AT1G29860
AT1G29860 WRKY DNA-binding protein 71

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY71arTal_v1_Chr1_+_10454433_10454433-0.252.0e-01Click!

Activity profile of AT1G29860 motif

Sorted Z-values of AT1G29860 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_24608605_24608605 2.19 AT5G61160.1
AACT1
anthocyanin 5-aromatic acyltransferase 1
arTal_v1_Chr4_+_8294446_8294452 1.95 AT4G14400.2
AT4G14400.3
ACD6
ankyrin repeat family protein
arTal_v1_Chr4_+_8294165_8294165 1.80 AT4G14400.1
ACD6
ankyrin repeat family protein
arTal_v1_Chr1_+_1882907_1882907 1.58 AT1G06160.1
ORA59
octadecanoid-responsive AP2/ERF 59
arTal_v1_Chr1_+_21207537_21207537 1.51 AT1G56600.1
GolS2
galactinol synthase 2
arTal_v1_Chr1_+_11532199_11532199 1.32 AT1G32060.1
PRK
phosphoribulokinase
arTal_v1_Chr1_-_29519323_29519323 1.32 AT1G78460.1
AT1G78460
SOUL heme-binding family protein
arTal_v1_Chr1_+_7949476_7949476 1.29 AT1G22500.1
ATL15
RING/U-box superfamily protein
arTal_v1_Chr5_+_22038165_22038165 1.26 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
arTal_v1_Chr3_-_18294621_18294621 1.26 AT3G49340.1
AT3G49340
Cysteine proteinases superfamily protein
arTal_v1_Chr5_-_3402389_3402389 1.26 AT5G10760.1
AT5G10760
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_-_16690182_16690182 1.25 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr4_-_17289728_17289728 1.23 AT4G36670.1
PMT6
Major facilitator superfamily protein
arTal_v1_Chr2_-_13862614_13862614 1.22 AT2G32680.1
RLP23
receptor like protein 23
arTal_v1_Chr2_+_1966806_1966816 1.22 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
arTal_v1_Chr2_-_1824480_1824480 1.21 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
arTal_v1_Chr4_-_1112033_1112033 1.20 AT4G02520.1
GSTF2
glutathione S-transferase PHI 2
arTal_v1_Chr4_+_10481619_10481619 1.19 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
arTal_v1_Chr3_-_8450799_8450799 1.18 AT3G23550.1
AT3G23550
MATE efflux family protein
arTal_v1_Chr5_-_8916856_8916856 1.18 AT5G25610.1
RD22
BURP domain-containing protein
arTal_v1_Chr1_+_6450585_6450585 1.17 AT1G18710.1
MYB47
myb domain protein 47
arTal_v1_Chr3_-_4775258_4775258 1.17 AT3G14310.1
PME3
pectin methylesterase 3
arTal_v1_Chr1_-_24062804_24062804 1.14 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
arTal_v1_Chr1_-_7400604_7400736 1.14 AT1G21130.2
AT1G21130.1
IGMT4
O-methyltransferase family protein
arTal_v1_Chr2_+_1966610_1966610 1.13 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
arTal_v1_Chr2_+_19061688_19061688 1.12 AT2G46440.2
AT2G46440.1
CNGC11
cyclic nucleotide-gated channels
arTal_v1_Chr5_-_17962276_17962276 1.08 AT5G44568.1
AT5G44568
transmembrane protein
arTal_v1_Chr1_+_24647121_24647121 1.05 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_-_23165387_23165387 1.04 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
arTal_v1_Chr5_+_17806397_17806397 1.04 AT5G44210.1
ERF9
erf domain protein 9
arTal_v1_Chr5_-_21265460_21265460 1.03 AT5G52390.1
AT5G52390
PAR1 protein
arTal_v1_Chr4_-_11648644_11648644 1.02 AT4G21960.1
PRXR1
Peroxidase superfamily protein
arTal_v1_Chr2_+_17135347_17135347 1.02 AT2G41090.1
AT2G41090
Calcium-binding EF-hand family protein
arTal_v1_Chr1_+_24349399_24349632 1.01 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
arTal_v1_Chr4_-_13022996_13022996 1.01 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
arTal_v1_Chr3_+_4510965_4510965 1.00 AT3G13750.1
BGAL1
beta galactosidase 1
arTal_v1_Chr4_+_12310619_12310619 1.00 AT4G23600.3
CORI3
Tyrosine transaminase family protein
arTal_v1_Chr4_+_12310379_12310379 0.99 AT4G23600.1
CORI3
Tyrosine transaminase family protein
arTal_v1_Chr1_+_24035941_24035968 0.99 AT1G64680.1
AT1G64680.2
AT1G64680
beta-carotene isomerase D27
arTal_v1_Chr3_-_22322661_22322661 0.99 AT3G60390.1
HAT3
homeobox-leucine zipper protein 3
arTal_v1_Chr1_-_20993569_20993572 0.98 AT1G56120.3
AT1G56120.2
AT1G56120
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr1_-_11297379_11297379 0.97 AT1G31550.1
AT1G31550.2
AT1G31550
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_5460477_5460477 0.95 AT1G15885.1
AT1G15885
hypothetical protein
arTal_v1_Chr5_+_26573964_26573964 0.95 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr2_-_13717002_13717002 0.95 AT2G32290.1
BAM6
beta-amylase 6
arTal_v1_Chr5_+_6006035_6006035 0.95 AT5G18170.1
GDH1
glutamate dehydrogenase 1
arTal_v1_Chr4_-_15275404_15275404 0.95 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
arTal_v1_Chr5_+_7222179_7222226 0.94 AT5G21430.1
AT5G21430.2
NdhU
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr3_-_18863397_18863397 0.94 AT3G50750.1
BEH1
BES1/BZR1 homolog 1
arTal_v1_Chr5_+_24046512_24046512 0.94 AT5G59680.1
AT5G59680
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_23225951_23225951 0.93 AT5G57340.2
AT5G57340.1
AT5G57340
ras guanine nucleotide exchange factor Q-like protein
arTal_v1_Chr5_-_3190321_3190321 0.93 AT5G10170.1
MIPS3
myo-inositol-1-phosphate synthase 3
arTal_v1_Chr4_+_12310885_12310885 0.92 AT4G23600.2
CORI3
Tyrosine transaminase family protein
arTal_v1_Chr1_-_24996117_24996359 0.92 AT1G66970.2
AT1G66970.3
AT1G66970.1
SVL2
SHV3-like 2
arTal_v1_Chr2_+_8059106_8059106 0.92 AT2G18560.1
AT2G18560
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_+_20210792_20210792 0.92 AT3G54600.1
DJ1F
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr5_-_3339384_3339384 0.91 AT5G10560.1
AT5G10560
Glycosyl hydrolase family protein
arTal_v1_Chr1_-_156011_156011 0.91 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr2_-_14325205_14325205 0.91 AT2G33855.1
AT2G33855
transmembrane protein
arTal_v1_Chr2_-_10329941_10330048 0.91 AT2G24270.3
AT2G24270.4
AT2G24270.2
AT2G24270.1
ALDH11A3
aldehyde dehydrogenase 11A3
arTal_v1_Chr2_+_17507343_17507343 0.90 AT2G41940.1
ZFP8
zinc finger protein 8
arTal_v1_Chr1_-_156178_156178 0.90 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr4_+_11929359_11929359 0.90 AT4G22690.1
CYP706A1
cytochrome P450, family 706, subfamily A, polypeptide 1
arTal_v1_Chr5_-_7410102_7410102 0.90 AT5G22380.1
NAC090
NAC domain containing protein 90
arTal_v1_Chr3_+_16525245_16525311 0.90 AT3G45140.1
AT3G45140.2
LOX2
lipoxygenase 2
arTal_v1_Chr5_-_3183984_3184110 0.90 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr5_+_6017797_6017797 0.89 AT5G18210.1
AT5G18210.2
AT5G18210
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_+_25616625_25616625 0.89 AT5G64000.2
AT5G64000.1
SAL2
Inositol monophosphatase family protein
arTal_v1_Chr1_+_13220471_13220471 0.88 AT1G35710.1
AT1G35710
kinase family with leucine-rich repeat domain-containing protein
arTal_v1_Chr5_-_7419335_7419335 0.88 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr1_-_4394343_4394454 0.88 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
GAPA-2
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
arTal_v1_Chr4_+_18519599_18519599 0.88 AT4G39940.1
AKN2
APS-kinase 2
arTal_v1_Chr4_-_12120214_12120220 0.87 AT4G23130.2
AT4G23130.1
AT4G23130.3
CRK5
cysteine-rich RLK (RECEPTOR-like protein kinase) 5
arTal_v1_Chr4_-_7992429_7992429 0.87 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
arTal_v1_Chr5_-_3183484_3183484 0.86 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr3_-_343912_343912 0.85 AT3G02020.1
AK3
aspartate kinase 3
arTal_v1_Chr1_+_16127353_16127353 0.85 AT1G42970.1
GAPB
glyceraldehyde-3-phosphate dehydrogenase B subunit
arTal_v1_Chr1_-_8935544_8935544 0.84 AT1G25440.1
BBX15
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr5_+_2446669_2446669 0.84 AT5G07690.1
MYB29
myb domain protein 29
arTal_v1_Chr1_-_19822399_19822399 0.84 AT1G53170.1
ERF8
ethylene response factor 8
arTal_v1_Chr5_+_17798262_17798281 0.84 AT5G44190.2
AT5G44190.1
GLK2
GOLDEN2-like 2
arTal_v1_Chr1_+_24468770_24468804 0.84 AT1G65790.2
AT1G65790.1
AT1G65790.3
RK1
receptor kinase 1
arTal_v1_Chr5_+_25037191_25037191 0.83 AT5G62350.1
AT5G62350
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr2_-_2588448_2588448 0.83 AT2G06520.1
PSBX
photosystem II subunit X
arTal_v1_Chr1_-_8425385_8425385 0.83 AT1G23840.1
AT1G23840
transmembrane protein
arTal_v1_Chr2_+_9219252_9219252 0.82 AT2G21530.1
AT2G21530
SMAD/FHA domain-containing protein
arTal_v1_Chr4_-_13672413_13672413 0.82 AT4G27300.1
AT4G27300
S-locus lectin protein kinase family protein
arTal_v1_Chr5_+_17979149_17979149 0.82 AT5G44580.1
AT5G44580
transmembrane protein
arTal_v1_Chr5_+_25523827_25523827 0.82 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr3_+_7018826_7018826 0.82 AT3G20100.1
CYP705A19
cytochrome P450, family 705, subfamily A, polypeptide 19
arTal_v1_Chr5_+_25524045_25524045 0.82 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr2_-_15273115_15273115 0.82 AT2G36400.1
GRF3
growth-regulating factor 3
arTal_v1_Chr4_-_7857933_7857933 0.81 AT4G13500.1
AT4G13500
transmembrane protein
arTal_v1_Chr1_+_5878390_5878390 0.81 AT1G17200.1
AT1G17200
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_-_14328978_14328978 0.81 AT2G33860.1
ETT
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr3_+_21238223_21238223 0.81 AT3G57400.1
AT3G57400
transmembrane protein
arTal_v1_Chr2_-_10454591_10454593 0.81 AT2G24600.2
AT2G24600.3
AT2G24600.4
AT2G24600.1
AT2G24600
Ankyrin repeat family protein
arTal_v1_Chr1_-_19472582_19472582 0.81 AT1G52290.2
AT1G52290.1
PERK15
Protein kinase superfamily protein
arTal_v1_Chr1_+_21564111_21564111 0.80 AT1G58225.2
AT1G58225.1
AT1G58225
hypothetical protein
arTal_v1_Chr5_+_22468579_22468579 0.80 AT5G55460.1
AT5G55460
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_12589866_12590058 0.80 AT2G29310.3
AT2G29310.1
AT2G29310.2
AT2G29310.4
AT2G29310
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_-_7153571_7153681 0.80 AT4G11900.10
AT4G11900.8
AT4G11900.9
AT4G11900.7
AT4G11900.6
AT4G11900.3
AT4G11900.5
AT4G11900.2
AT4G11900.4
AT4G11900.1
AT4G11900
S-locus lectin protein kinase family protein
arTal_v1_Chr2_+_16666023_16666023 0.80 AT2G39930.3
AT2G39930.2
ISA1
isoamylase 1
arTal_v1_Chr1_-_28423520_28423520 0.80 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
arTal_v1_Chr2_-_12277417_12277417 0.79 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr2_+_8855302_8855358 0.79 AT2G20570.1
AT2G20570.3
AT2G20570.2
GPRI1
GBF's pro-rich region-interacting factor 1
arTal_v1_Chr4_-_7591259_7591259 0.78 AT4G12980.1
AT4G12980
Auxin-responsive family protein
arTal_v1_Chr1_-_4530222_4530222 0.78 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
arTal_v1_Chr4_-_69884_69957 0.78 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_21246682_21246774 0.78 AT5G52320.2
AT5G52320.1
CYP96A4
cytochrome P450, family 96, subfamily A, polypeptide 4
arTal_v1_Chr2_+_19243348_19243427 0.77 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
arTal_v1_Chr4_-_12890261_12890262 0.77 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
arTal_v1_Chr1_+_907523_907651 0.76 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
arTal_v1_Chr3_+_4988008_4988107 0.76 AT3G14840.2
AT3G14840.1
AT3G14840
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr1_+_26906401_26906453 0.76 AT1G71390.2
AT1G71390.1
RLP11
receptor like protein 11
arTal_v1_Chr3_-_197974_197974 0.76 AT3G01500.1
CA1
carbonic anhydrase 1
arTal_v1_Chr2_-_12277245_12277245 0.75 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr5_+_1615507_1615507 0.75 AT5G05460.1
ENGase85A
Glycosyl hydrolase family 85
arTal_v1_Chr3_-_18857040_18857040 0.75 AT3G50740.1
UGT72E1
UDP-glucosyl transferase 72E1
arTal_v1_Chr3_-_17393699_17393699 0.74 AT3G47230.1
AT3G47230

arTal_v1_Chr2_-_14328256_14328256 0.74 AT2G33860.2
ETT
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr3_+_3474922_3474922 0.74 AT3G11090.1
LBD21
LOB domain-containing protein 21
arTal_v1_Chr4_-_5932475_5932475 0.74 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr3_-_5469594_5469594 0.73 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr3_+_5592644_5592644 0.73 AT3G16460.2
JAL34
Mannose-binding lectin superfamily protein
arTal_v1_Chr3_+_23168454_23168454 0.73 AT3G62650.1
AT3G62650
hypothetical protein
arTal_v1_Chr2_+_8063023_8063023 0.73 AT2G18570.1
AT2G18570
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_+_17643110_17643110 0.73 AT4G37550.4
AT4G37550.1
AT4G37550.2
AT4G37550
Acetamidase/Formamidase family protein
arTal_v1_Chr4_-_18428412_18428578 0.73 AT4G39710.2
AT4G39710.3
AT4G39710.1
PnsL4
FK506-binding protein 16-2
arTal_v1_Chr3_+_5579290_5579475 0.72 AT3G16420.1
AT3G16420.3
AT3G16420.2
PBP1
PYK10-binding protein 1
arTal_v1_Chr1_-_29352946_29352946 0.72 AT1G78060.1
AT1G78060
Glycosyl hydrolase family protein
arTal_v1_Chr3_-_198160_198160 0.72 AT3G01500.2
CA1
carbonic anhydrase 1
arTal_v1_Chr3_-_11533028_11533028 0.72 AT3G29680.1
AT3G29680
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_19309227_19309227 0.72 AT5G47640.1
NF-YB2
nuclear factor Y, subunit B2
arTal_v1_Chr3_+_23168061_23168061 0.72 AT3G62650.2
AT3G62650
hypothetical protein
arTal_v1_Chr1_-_3756998_3756998 0.72 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr3_+_5592491_5592491 0.72 AT3G16460.1
JAL34
Mannose-binding lectin superfamily protein
arTal_v1_Chr4_+_222289_222289 0.72 AT4G00490.1
BAM2
beta-amylase 2
arTal_v1_Chr4_+_17986384_17986384 0.71 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
arTal_v1_Chr1_+_6389399_6389399 0.71 AT1G18570.1
MYB51
myb domain protein 51
arTal_v1_Chr2_-_19350650_19350650 0.71 AT2G47130.1
SDR3
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_-_352095_352095 0.71 AT5G01900.1
WRKY62
WRKY DNA-binding protein 62
arTal_v1_Chr1_-_20993072_20993072 0.71 AT1G56120.1
AT1G56120
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr2_+_16665851_16665851 0.71 AT2G39930.1
ISA1
isoamylase 1
arTal_v1_Chr2_-_13307572_13307572 0.71 AT2G31230.1
ERF15
ethylene-responsive element binding factor 15
arTal_v1_Chr4_+_17643548_17643570 0.71 AT4G37550.6
AT4G37550.3
AT4G37550
Acetamidase/Formamidase family protein
arTal_v1_Chr3_-_22907958_22907958 0.70 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
arTal_v1_Chr1_-_20017932_20017932 0.70 AT1G53633.1
AT1G53633
hypothetical protein
arTal_v1_Chr1_+_20876440_20876440 0.70 AT1G55850.1
CSLE1
cellulose synthase like E1
arTal_v1_Chr1_-_3443957_3443957 0.70 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
arTal_v1_Chr4_+_8883825_8883825 0.70 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
arTal_v1_Chr3_-_198664_198664 0.70 AT3G01500.3
CA1
carbonic anhydrase 1
arTal_v1_Chr2_-_1355883_1355883 0.70 AT2G04070.1
AT2G04070
MATE efflux family protein
arTal_v1_Chr4_-_8454144_8454159 0.69 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
arTal_v1_Chr1_-_8983314_8983314 0.69 AT1G25560.1
TEM1
AP2/B3 transcription factor family protein
arTal_v1_Chr5_-_1706787_1706787 0.69 AT5G05690.2
AT5G05690.3
CPD
Cytochrome P450 superfamily protein
arTal_v1_Chr3_+_6465748_6465748 0.69 AT3G18773.1
AT3G18773
RING/U-box superfamily protein
arTal_v1_Chr1_-_7099892_7099892 0.69 AT1G20490.1
AT1G20490.2
AT1G20490
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr1_+_20905914_20905914 0.69 AT1G55910.1
ZIP11
zinc transporter 11 precursor
arTal_v1_Chr1_+_28829243_28829243 0.69 AT1G76800.1
AT1G76800
Vacuolar iron transporter (VIT) family protein
arTal_v1_Chr1_-_19101265_19101265 0.69 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
arTal_v1_Chr5_+_15608685_15608685 0.69 AT5G38990.1
AT5G38990
Malectin/receptor-like protein kinase family protein
arTal_v1_Chr1_+_24554413_24554413 0.68 AT1G65960.4
GAD2
glutamate decarboxylase 2
arTal_v1_Chr1_+_24551807_24551807 0.68 AT1G65960.3
AT1G65960.1
GAD2
glutamate decarboxylase 2
arTal_v1_Chr1_-_3444360_3444360 0.68 AT1G10470.1
ARR4
response regulator 4
arTal_v1_Chr3_+_5187082_5187082 0.68 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
arTal_v1_Chr4_+_3356535_3356535 0.68 AT4G06534.1
AT4G06534
transmembrane protein
arTal_v1_Chr3_+_17987378_17987378 0.68 AT3G48530.1
KING1
SNF1-related protein kinase regulatory subunit gamma 1
arTal_v1_Chr2_+_6533687_6533687 0.68 AT2G15080.2
RLP19
receptor like protein 19
arTal_v1_Chr5_+_24480291_24480291 0.68 AT5G60850.1
OBP4
OBF binding protein 4
arTal_v1_Chr1_+_21167565_21167565 0.68 AT1G56510.1
WRR4
Disease resistance protein (TIR-NBS-LRR class)
arTal_v1_Chr2_-_8706900_8707009 0.67 AT2G20180.5
AT2G20180.4
AT2G20180.8
AT2G20180.2
AT2G20180.1
AT2G20180.7
AT2G20180.6
AT2G20180.3
PIL5
phytochrome interacting factor 3-like 5
arTal_v1_Chr2_-_12415661_12415661 0.67 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
arTal_v1_Chr1_+_27935156_27935298 0.67 AT1G74300.1
AT1G74300.2
AT1G74300
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_6533261_6533261 0.67 AT2G15080.1
RLP19
receptor like protein 19
arTal_v1_Chr1_+_5879365_5879365 0.66 AT1G17200.2
AT1G17200
Uncharacterized protein family (UPF0497)
arTal_v1_Chr5_-_26547793_26547793 0.66 AT5G66490.1
AT5G66490
hypothetical protein
arTal_v1_Chr4_+_10071481_10071481 0.66 AT4G18197.1
PUP7
purine permease 7
arTal_v1_Chr1_+_27786864_27786864 0.66 AT1G73885.1
AT1G73885
AT-rich interactive domain protein
arTal_v1_Chr1_+_23159734_23159734 0.66 AT1G62560.1
AT1G62560.2
FMO GS-OX3
flavin-monooxygenase glucosinolate S-oxygenase 3
arTal_v1_Chr1_-_27568281_27568281 0.66 AT1G73325.1
AT1G73325
Kunitz family trypsin and protease inhibitor protein
arTal_v1_Chr2_-_12428730_12428737 0.66 AT2G28940.1
AT2G28940.2
AT2G28940
Protein kinase superfamily protein
arTal_v1_Chr1_+_24354646_24354771 0.66 AT1G65490.2
AT1G65490.3
AT1G65490.1
AT1G65490
transmembrane protein
arTal_v1_Chr1_-_3392524_3392633 0.66 AT1G10340.2
AT1G10340.1
AT1G10340
Ankyrin repeat family protein
arTal_v1_Chr3_-_197564_197564 0.66 AT3G01500.4
CA1
carbonic anhydrase 1
arTal_v1_Chr5_-_1706948_1706948 0.65 AT5G05690.1
CPD
Cytochrome P450 superfamily protein
arTal_v1_Chr2_-_2983602_2983657 0.65 AT2G07180.2
AT2G07180.1
AT2G07180
Protein kinase superfamily protein
arTal_v1_Chr5_+_4974671_4974671 0.65 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
arTal_v1_Chr1_+_24552003_24552003 0.65 AT1G65960.2
GAD2
glutamate decarboxylase 2
arTal_v1_Chr4_-_12170055_12170080 0.65 AT4G23260.1
AT4G23260.2
CRK18
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
arTal_v1_Chr1_-_25395249_25395249 0.65 AT1G67740.1
PSBY
photosystem II BY
arTal_v1_Chr3_+_8501556_8501556 0.65 AT3G23640.3
AT3G23640.2
HGL1
heteroglycan glucosidase 1
arTal_v1_Chr4_+_10073711_10073711 0.65 AT4G18205.1
AT4G18205
Nucleotide-sugar transporter family protein
arTal_v1_Chr4_+_12314025_12314025 0.64 AT4G23610.1
AT4G23610
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr5_-_1139631_1139633 0.64 AT5G04150.2
AT5G04150.1
BHLH101
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr5_+_26664842_26664842 0.64 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
arTal_v1_Chr5_+_2399726_2399726 0.64 AT5G07580.1
AT5G07580
ethylene-responsive transcription factor
arTal_v1_Chr5_+_25423370_25423370 0.64 AT5G63500.1
AT5G63500
transmembrane protein, putative (DUF 3339)
arTal_v1_Chr3_+_17929581_17929581 0.64 AT3G48420.1
AT3G48420
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr2_-_8880388_8880440 0.64 AT2G20610.2
AT2G20610.1
SUR1
Tyrosine transaminase family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G29860

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:0035606 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.4 4.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.4 2.5 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.4 1.4 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.3 3.0 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.3 4.4 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.3 0.9 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.3 1.2 GO:0019499 cyanide metabolic process(GO:0019499)
0.3 1.7 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.3 1.7 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.3 3.5 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.3 0.8 GO:0071461 cellular response to redox state(GO:0071461)
0.3 1.5 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.2 0.7 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 0.7 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.2 0.7 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 2.9 GO:0010158 abaxial cell fate specification(GO:0010158)
0.2 0.9 GO:0010480 microsporocyte differentiation(GO:0010480)
0.2 0.7 GO:0035017 cuticle pattern formation(GO:0035017)
0.2 0.6 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.2 0.8 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 0.8 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.2 0.8 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.2 0.6 GO:0080058 protein deglutathionylation(GO:0080058)
0.2 1.0 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.2 1.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 1.7 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 0.9 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.2 1.3 GO:0006021 inositol biosynthetic process(GO:0006021)
0.2 0.5 GO:0009590 detection of gravity(GO:0009590)
0.2 0.7 GO:0006517 protein deglycosylation(GO:0006517)
0.2 1.6 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.2 1.2 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.2 0.5 GO:0046521 sphingoid catabolic process(GO:0046521)
0.2 0.7 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 1.1 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.2 1.2 GO:0043489 RNA stabilization(GO:0043489)
0.2 1.6 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.2 1.1 GO:0009099 valine biosynthetic process(GO:0009099)
0.2 1.7 GO:1905156 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.2 0.8 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.1 0.6 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.1 0.4 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.1 0.9 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.1 GO:0019372 lipoxygenase pathway(GO:0019372)
0.1 0.4 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.4 GO:0042660 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.1 0.6 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.8 GO:0051098 regulation of binding(GO:0051098)
0.1 1.8 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.8 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.4 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.8 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.6 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.4 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.7 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 0.2 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.1 1.4 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.5 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.1 GO:0031221 arabinan metabolic process(GO:0031221)
0.1 2.0 GO:0009641 shade avoidance(GO:0009641)
0.1 2.3 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 0.6 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.3 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.1 0.5 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.9 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.1 1.3 GO:0007143 female meiotic division(GO:0007143)
0.1 0.3 GO:0080119 ER body organization(GO:0080119)
0.1 0.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.5 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.1 0.4 GO:0019627 urea metabolic process(GO:0019627)
0.1 0.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 1.0 GO:1902408 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 0.5 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.8 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.4 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.1 0.4 GO:0009557 antipodal cell differentiation(GO:0009557)
0.1 2.1 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.4 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414) tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.1 0.6 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.1 0.5 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.1 0.2 GO:0048533 sporocyte differentiation(GO:0048533)
0.1 0.3 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.3 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.1 2.0 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.3 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 1.2 GO:0009608 response to symbiont(GO:0009608)
0.1 1.4 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 0.4 GO:0010272 response to silver ion(GO:0010272)
0.1 0.5 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 1.1 GO:0048564 photosystem I assembly(GO:0048564)
0.1 0.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 1.0 GO:0032544 plastid translation(GO:0032544)
0.1 0.4 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.1 0.8 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.2 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.8 GO:0010206 photosystem II repair(GO:0010206)
0.1 0.2 GO:2000011 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.4 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.1 0.2 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.4 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.1 0.5 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.4 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.2 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.1 0.2 GO:0071042 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.1 0.3 GO:0010324 membrane invagination(GO:0010324)
0.1 0.4 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.5 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.3 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.2 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.1 0.1 GO:0015675 nickel cation transport(GO:0015675)
0.1 0.8 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.3 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 0.9 GO:0000165 MAPK cascade(GO:0000165)
0.1 1.0 GO:0090056 regulation of chlorophyll metabolic process(GO:0090056)
0.1 0.3 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.3 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.5 GO:0010230 alternative respiration(GO:0010230)
0.1 0.6 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 0.7 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 1.8 GO:0006284 base-excision repair(GO:0006284)
0.1 0.3 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.1 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.1 0.4 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.6 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.2 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 1.1 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 0.2 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.1 0.5 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.1 GO:0035264 multicellular organism growth(GO:0035264)
0.1 0.4 GO:0043481 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.3 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 0.2 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 0.5 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.3 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 0.4 GO:0009061 anaerobic respiration(GO:0009061)
0.1 1.1 GO:0009269 response to desiccation(GO:0009269)
0.1 0.2 GO:0042814 monopolar cell growth(GO:0042814)
0.1 0.2 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 0.4 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 0.4 GO:2000034 regulation of seed maturation(GO:2000034)
0.1 0.1 GO:0071281 cellular response to iron ion(GO:0071281)
0.1 1.0 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.4 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 0.3 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 2.4 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.6 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.3 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.1 0.2 GO:0006788 heme oxidation(GO:0006788)
0.1 0.4 GO:0009438 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 0.8 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 0.2 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.1 GO:0017145 stem cell division(GO:0017145)
0.0 0.9 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.1 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.0 0.5 GO:0030026 intracellular sequestering of iron ion(GO:0006880) cellular manganese ion homeostasis(GO:0030026) sequestering of iron ion(GO:0097577)
0.0 0.2 GO:0010148 transpiration(GO:0010148)
0.0 0.5 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.3 GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay(GO:0043928)
0.0 3.0 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.1 GO:0009202 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202)
0.0 0.2 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.2 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.1 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.3 GO:0016120 carotene biosynthetic process(GO:0016120)
0.0 2.4 GO:0009631 cold acclimation(GO:0009631)
0.0 0.3 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.3 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.0 0.2 GO:1901562 response to paraquat(GO:1901562)
0.0 0.3 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.0 0.3 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.2 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.4 GO:0010098 suspensor development(GO:0010098)
0.0 0.1 GO:0048439 flower morphogenesis(GO:0048439)
0.0 0.1 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.0 1.1 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.3 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.3 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.0 0.6 GO:0055069 zinc ion homeostasis(GO:0055069)
0.0 0.6 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.4 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.1 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 1.8 GO:0071489 red or far-red light signaling pathway(GO:0010017) cellular response to red or far red light(GO:0071489)
0.0 0.3 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.2 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 0.6 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 1.3 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.8 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.2 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.1 GO:0010310 regulation of hydrogen peroxide metabolic process(GO:0010310)
0.0 0.8 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 0.2 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.2 GO:0097502 mannosylation(GO:0097502)
0.0 0.5 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.4 GO:0032042 mitochondrial DNA metabolic process(GO:0032042)
0.0 0.1 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.0 0.2 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 2.2 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.3 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.7 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.2 GO:0034227 tRNA thio-modification(GO:0034227)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.4 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.7 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.5 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.9 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.2 GO:2001022 positive regulation of DNA repair(GO:0045739) positive regulation of response to DNA damage stimulus(GO:2001022)
0.0 1.6 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.3 GO:0008535 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.6 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 0.6 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.3 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.3 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.2 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.8 GO:0090333 regulation of stomatal closure(GO:0090333)
0.0 0.4 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.1 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.0 0.3 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 0.0 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 1.5 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.1 GO:0010338 leaf formation(GO:0010338)
0.0 0.7 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.5 GO:0010229 inflorescence development(GO:0010229)
0.0 0.5 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.4 GO:0030091 protein repair(GO:0030091)
0.0 0.1 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.0 1.2 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.5 GO:0030855 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.1 GO:0009582 detection of external stimulus(GO:0009581) detection of abiotic stimulus(GO:0009582)
0.0 0.1 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.4 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.1 GO:0046937 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.0 0.3 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.7 GO:0016102 diterpenoid biosynthetic process(GO:0016102)
0.0 0.2 GO:0006546 glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.2 GO:0060548 negative regulation of cell death(GO:0060548)
0.0 0.3 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.2 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.1 GO:0071158 negative regulation of fatty acid biosynthetic process(GO:0045717) negative regulation of fatty acid metabolic process(GO:0045922) regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.2 GO:0006071 glycerol metabolic process(GO:0006071)
0.0 0.3 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.0 0.2 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.2 GO:0007020 microtubule nucleation(GO:0007020)
0.0 1.6 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.3 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.1 GO:0050000 nucleolus organization(GO:0007000) chromosome localization(GO:0050000)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.1 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 0.4 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.1 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.1 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.4 GO:0006754 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.4 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.1 GO:1903338 regulation of cell wall organization or biogenesis(GO:1903338)
0.0 0.3 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.6 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.1 GO:1903533 regulation of protein targeting(GO:1903533)
0.0 0.1 GO:0044843 G1/S transition of mitotic cell cycle(GO:0000082) cell cycle G1/S phase transition(GO:0044843)
0.0 0.2 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.0 0.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.4 GO:0010152 pollen maturation(GO:0010152)
0.0 0.7 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.0 0.3 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.1 GO:1901998 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.1 GO:2000580 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.2 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.1 GO:0048479 style development(GO:0048479)
0.0 0.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.2 GO:1902969 mitotic DNA replication(GO:1902969)
0.0 0.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.2 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.2 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.0 0.3 GO:0090332 stomatal closure(GO:0090332)
0.0 0.3 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.8 GO:0048825 cotyledon development(GO:0048825)
0.0 0.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.1 GO:0009085 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.3 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.2 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.1 GO:0016073 snRNA metabolic process(GO:0016073)
0.0 0.1 GO:0050777 negative regulation of immune response(GO:0050777)
0.0 0.2 GO:0034472 snRNA 3'-end processing(GO:0034472)
0.0 0.8 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 0.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.0 0.1 GO:0010447 response to acidic pH(GO:0010447)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.2 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.2 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.6 GO:0009559 embryo sac central cell differentiation(GO:0009559)
0.0 0.0 GO:0015720 allantoin transport(GO:0015720)
0.0 0.3 GO:0051761 sesquiterpene metabolic process(GO:0051761)
0.0 0.1 GO:2000068 regulation of defense response to insect(GO:2000068)
0.0 0.8 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.3 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.4 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.3 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.9 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.2 GO:0080060 integument development(GO:0080060)
0.0 0.4 GO:0050918 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.1 GO:0007265 Ras protein signal transduction(GO:0007265) Rho protein signal transduction(GO:0007266)
0.0 0.1 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.0 0.1 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.0 0.2 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.3 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.0 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.0 0.3 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.0 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.3 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.2 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.2 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.0 0.2 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.4 GO:0010091 trichome branching(GO:0010091)
0.0 0.1 GO:0046368 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.0 0.2 GO:0030071 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.0 0.1 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.0 0.9 GO:0010073 meristem maintenance(GO:0010073)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.3 GO:0010286 heat acclimation(GO:0010286)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.4 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 1.4 GO:0006457 protein folding(GO:0006457)
0.0 0.1 GO:0036260 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.0 0.1 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.0 0.3 GO:0010027 plastid membrane organization(GO:0009668) thylakoid membrane organization(GO:0010027)
0.0 0.0 GO:0090549 response to carbon starvation(GO:0090549)
0.0 0.1 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.1 GO:0044766 movement in host(GO:0044000) multi-organism transport(GO:0044766) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192) multi-organism localization(GO:1902579)
0.0 0.1 GO:0045851 pH reduction(GO:0045851)
0.0 0.2 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.0 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.0 0.2 GO:0015918 sterol transport(GO:0015918)
0.0 0.0 GO:0000085 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.2 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.6 GO:0043401 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) response to steroid hormone(GO:0048545) cellular response to steroid hormone stimulus(GO:0071383)
0.0 0.1 GO:0080121 ADP transport(GO:0015866) ATP transport(GO:0015867) AMP transport(GO:0080121)
0.0 0.2 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.1 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.1 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.0 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.3 GO:0051607 defense response to virus(GO:0051607)
0.0 0.0 GO:0052542 defense response by callose deposition(GO:0052542)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.8 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.3 1.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.3 0.8 GO:0030093 chloroplast photosystem I(GO:0030093)
0.2 1.3 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 0.5 GO:0043674 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.2 1.1 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 0.6 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 6.2 GO:0010319 stromule(GO:0010319)
0.1 1.1 GO:0010168 ER body(GO:0010168)
0.1 0.2 GO:0055037 recycling endosome(GO:0055037)
0.1 1.7 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 1.0 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.4 GO:0032044 DSIF complex(GO:0032044)
0.1 0.4 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 0.7 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 5.8 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.1 0.6 GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.1 0.5 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 0.2 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.4 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.1 0.2 GO:0097361 CIA complex(GO:0097361)
0.1 0.3 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 0.3 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 1.4 GO:0009574 preprophase band(GO:0009574)
0.1 1.1 GO:0009508 plastid chromosome(GO:0009508)
0.1 1.1 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.3 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 0.6 GO:0005688 U6 snRNP(GO:0005688)
0.1 3.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 0.2 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.3 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 15.8 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.7 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.3 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 1.4 GO:0005764 lysosome(GO:0005764)
0.0 0.2 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.0 0.4 GO:0010369 chromocenter(GO:0010369)
0.0 0.3 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.1 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 0.8 GO:0010287 plastoglobule(GO:0010287)
0.0 0.2 GO:0000811 GINS complex(GO:0000811)
0.0 0.9 GO:0005761 mitochondrial ribosome(GO:0005761) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.4 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 9.9 GO:0048046 apoplast(GO:0048046)
0.0 0.3 GO:0034991 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.5 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.1 GO:0070847 core mediator complex(GO:0070847)
0.0 0.4 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.5 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.2 GO:0070552 BRISC complex(GO:0070552)
0.0 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 8.2 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.2 GO:0000922 spindle pole(GO:0000922)
0.0 1.0 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 0.1 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.3 GO:0045298 tubulin complex(GO:0045298)
0.0 0.1 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 11.0 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.2 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.4 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.5 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.5 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.0 0.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0030286 dynein complex(GO:0030286)
0.0 0.3 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 0.2 GO:0048226 Casparian strip(GO:0048226)
0.0 0.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.4 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.3 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.2 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.5 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.7 GO:0090575 RNA polymerase II transcription factor complex(GO:0090575)
0.0 0.2 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.1 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.1 GO:0035619 root hair(GO:0035618) root hair tip(GO:0035619)
0.0 0.0 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.0 0.5 GO:0009707 chloroplast outer membrane(GO:0009707)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.5 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.6 1.7 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.5 1.5 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.4 1.5 GO:0019156 isoamylase activity(GO:0019156)
0.4 1.4 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.4 1.1 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.3 1.7 GO:0004072 aspartate kinase activity(GO:0004072)
0.3 1.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 0.9 GO:0030275 LRR domain binding(GO:0030275)
0.3 0.8 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.3 0.8 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.2 0.7 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.2 0.7 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.2 0.9 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.2 0.7 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.2 0.6 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.2 1.3 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.2 0.8 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 1.9 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.8 GO:0008301 DNA binding, bending(GO:0008301)
0.2 1.0 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.2 1.2 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.2 1.7 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.2 0.7 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.2 0.5 GO:0035671 enone reductase activity(GO:0035671)
0.2 0.7 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.2 0.9 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.2 1.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.2 0.6 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.2 0.5 GO:0019904 protein domain specific binding(GO:0019904)
0.1 1.9 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.4 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 1.4 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.8 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 1.5 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.4 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.7 GO:0035197 siRNA binding(GO:0035197)
0.1 0.6 GO:0052593 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 0.7 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.8 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 0.6 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.1 0.4 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.1 0.7 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.5 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.6 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 2.6 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.3 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.5 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.4 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 0.1 GO:0019202 amino acid kinase activity(GO:0019202)
0.1 3.5 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.6 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.8 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.2 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.1 0.7 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.6 GO:0070568 guanylyltransferase activity(GO:0070568)
0.1 0.4 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.3 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 0.5 GO:0005274 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.1 0.3 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.1 0.4 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.3 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.3 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.1 0.1 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 0.2 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.1 2.6 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.3 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.1 1.5 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 0.2 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.1 0.3 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.5 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 1.1 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 0.5 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.3 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.3 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.6 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.6 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 1.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 1.0 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 0.4 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 0.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.3 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.5 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 1.1 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.3 GO:0048365 Rac GTPase binding(GO:0048365)
0.1 0.5 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.3 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.1 1.5 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.3 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.2 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.1 0.4 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 1.0 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.4 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.9 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.4 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.1 0.2 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 1.5 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.3 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 0.4 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 1.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.6 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.4 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 0.2 GO:0004156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.1 0.5 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.5 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 1.5 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.2 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 0.2 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 0.9 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.1 0.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.2 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.6 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.4 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.1 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.1 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.0 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 1.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.1 GO:0047912 galacturonokinase activity(GO:0047912)
0.0 0.2 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.3 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.1 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 0.8 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.1 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.0 0.6 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.5 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.8 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.6 GO:0005402 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.0 0.2 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.5 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.2 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 0.9 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.2 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 0.4 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.3 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.3 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.2 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.3 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.0 0.4 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.5 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.1 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.0 0.7 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 2.4 GO:0043621 protein self-association(GO:0043621)
0.0 0.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.4 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.1 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.0 0.2 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.0 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.7 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.4 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.4 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.2 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.6 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.0 0.4 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 1.4 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.3 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.3 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.3 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.6 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.2 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.0 0.7 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.5 GO:0070566 adenylyltransferase activity(GO:0070566)
0.0 1.7 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.4 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.3 GO:2001070 starch binding(GO:2001070)
0.0 0.2 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.2 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.8 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.2 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.2 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.5 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 1.5 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 0.2 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.1 GO:0046870 cadmium ion binding(GO:0046870)
0.0 0.3 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.0 0.1 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.1 GO:0097617 annealing activity(GO:0097617)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 3.9 GO:0043531 ADP binding(GO:0043531)
0.0 0.2 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.5 GO:0030276 clathrin binding(GO:0030276)
0.0 0.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.0 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.0 0.1 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.1 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 1.4 GO:0004180 carboxypeptidase activity(GO:0004180)
0.0 0.1 GO:0004106 chorismate mutase activity(GO:0004106)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.6 GO:0009975 cyclase activity(GO:0009975)
0.0 6.9 GO:0005506 iron ion binding(GO:0005506)
0.0 1.1 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.3 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.3 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 1.1 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.1 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.1 GO:0048030 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.2 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.9 GO:0008483 transaminase activity(GO:0008483) transferase activity, transferring nitrogenous groups(GO:0016769)
0.0 0.1 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.1 GO:0080122 organic cation transmembrane transporter activity(GO:0015101) AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.0 0.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.1 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.2 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.2 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.1 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.0 4.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0008936 nicotinamidase activity(GO:0008936)
0.0 0.3 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.2 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.1 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.0 0.2 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.0 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.4 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.1 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.0 0.5 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.2 GO:0016783 sulfurtransferase activity(GO:0016783)
0.0 0.1 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.4 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.1 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.0 0.1 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.0 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.0 0.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.1 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.1 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.5 GO:0004527 exonuclease activity(GO:0004527)
0.0 0.1 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 1.7 GO:0008017 microtubule binding(GO:0008017)
0.0 0.1 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.0 8.4 GO:0000976 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 0.2 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.1 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.2 GO:0008276 protein methyltransferase activity(GO:0008276)
0.0 0.4 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.9 GO:0003724 RNA helicase activity(GO:0003724)
0.0 1.0 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.0 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.3 GO:0051087 chaperone binding(GO:0051087)
0.0 0.0 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.0 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.3 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.2 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 1.1 GO:0030246 carbohydrate binding(GO:0030246)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.5 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.8 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.3 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.1 0.2 PID REELIN PATHWAY Reelin signaling pathway
0.0 0.1 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.4 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.2 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.1 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.1 PID ATM PATHWAY ATM pathway
0.0 0.0 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.5 2.8 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.2 1.1 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.1 REACTOME TRANS GOLGI NETWORK VESICLE BUDDING Genes involved in trans-Golgi Network Vesicle Budding
0.1 0.3 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.4 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.1 1.7 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.1 1.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.4 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.1 0.4 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.2 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 0.2 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.0 0.3 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.3 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.0 REACTOME MITOTIC G2 G2 M PHASES Genes involved in Mitotic G2-G2/M phases
0.0 0.3 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.1 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.0 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.0 0.1 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.0 0.1 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.0 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway