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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G31140

Z-value: 1.07

Transcription factors associated with AT1G31140

Gene Symbol Gene ID Gene Info
AT1G31140
AT1G31140 GORDITA

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GOAarTal_v1_Chr1_+_11117941_11117993-0.471.1e-02Click!

Activity profile of AT1G31140 motif

Sorted Z-values of AT1G31140 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_-_4090857_4090857 1.70 AT1G12090.1
ELP
extensin-like protein
arTal_v1_Chr1_-_24606722_24606722 1.56 AT1G66100.1
AT1G66100
Plant thionin
arTal_v1_Chr3_-_197974_197974 1.44 AT3G01500.1
CA1
carbonic anhydrase 1
arTal_v1_Chr3_-_198160_198160 1.41 AT3G01500.2
CA1
carbonic anhydrase 1
arTal_v1_Chr3_-_198664_198664 1.40 AT3G01500.3
CA1
carbonic anhydrase 1
arTal_v1_Chr4_-_18098633_18098633 1.39 AT4G38770.1
PRP4
proline-rich protein 4
arTal_v1_Chr4_-_17777445_17777445 1.37 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
arTal_v1_Chr5_+_4757856_4757972 1.37 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
arTal_v1_Chr3_+_17228642_17228642 1.36 AT3G46780.1
PTAC16
plastid transcriptionally active 16
arTal_v1_Chr2_+_16476198_16476216 1.35 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
arTal_v1_Chr5_+_22038165_22038165 1.35 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
arTal_v1_Chr5_-_25898171_25898171 1.34 AT5G64770.1
RGF9
root meristem growth factor
arTal_v1_Chr3_-_197564_197564 1.34 AT3G01500.4
CA1
carbonic anhydrase 1
arTal_v1_Chr5_+_9072708_9072727 1.32 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
arTal_v1_Chr3_+_23266227_23266227 1.31 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
arTal_v1_Chr3_-_1860797_1860797 1.31 AT3G06145.1
AT3G06145
RING zinc finger protein
arTal_v1_Chr1_+_26141726_26141836 1.31 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
arTal_v1_Chr1_+_28053030_28053030 1.29 AT1G74670.1
GASA6
Gibberellin-regulated family protein
arTal_v1_Chr5_-_17907638_17907638 1.27 AT5G44420.1
PDF1.2
plant defensin 1.2
arTal_v1_Chr5_+_5237970_5238178 1.27 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
arTal_v1_Chr5_+_8863224_8863224 1.26 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr1_-_7531108_7531108 1.24 AT1G21500.1
AT1G21500
hypothetical protein
arTal_v1_Chr4_-_7316871_7316871 1.24 AT4G12320.1
CYP706A6
cytochrome P450, family 706, subfamily A, polypeptide 6
arTal_v1_Chr1_+_6409655_6409655 1.21 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
arTal_v1_Chr5_-_8916856_8916856 1.20 AT5G25610.1
RD22
BURP domain-containing protein
arTal_v1_Chr3_-_16448844_16448844 1.20 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
arTal_v1_Chr3_+_5505360_5505360 1.20 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
arTal_v1_Chr1_+_10375754_10375754 1.19 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_+_14577083_14577083 1.17 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
arTal_v1_Chr5_+_4758921_4758921 1.16 AT5G14740.9
CA2
carbonic anhydrase 2
arTal_v1_Chr2_-_6493512_6493512 1.16 AT2G15020.1
AT2G15020
hypothetical protein
arTal_v1_Chr1_+_10375599_10375599 1.16 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_+_8294446_8294452 1.15 AT4G14400.2
AT4G14400.3
ACD6
ankyrin repeat family protein
arTal_v1_Chr3_+_5556710_5556710 1.15 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_+_13647699_13647699 1.14 AT2G32100.1
OFP16
ovate family protein 16
arTal_v1_Chr4_+_16022269_16022368 1.13 AT4G33220.1
AT4G33220.2
PME44
pectin methylesterase 44
arTal_v1_Chr1_+_3008910_3008910 1.12 AT1G09310.1
AT1G09310
plant/protein (Protein of unknown function, DUF538)
arTal_v1_Chr2_+_12585856_12585856 1.11 AT2G29290.1
AT2G29290.2
AT2G29290
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_+_21009347_21009347 1.11 AT5G51720.1
NEET
2 iron, 2 sulfur cluster binding protein
arTal_v1_Chr4_+_17243583_17243583 1.10 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
arTal_v1_Chr4_+_2449434_2449434 1.10 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
arTal_v1_Chr1_+_10477885_10477885 1.10 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr5_-_17909507_17909507 1.10 AT5G44430.1
PDF1.2c
plant defensin 1.2C
arTal_v1_Chr3_-_7557969_7557969 1.09 AT3G21460.1
AT3G21460
Glutaredoxin family protein
arTal_v1_Chr4_+_8294165_8294165 1.08 AT4G14400.1
ACD6
ankyrin repeat family protein
arTal_v1_Chr4_-_7857933_7857933 1.07 AT4G13500.1
AT4G13500
transmembrane protein
arTal_v1_Chr5_+_5238502_5238502 1.07 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
arTal_v1_Chr1_-_28423520_28423520 1.06 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
arTal_v1_Chr1_-_26711462_26711587 1.05 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
arTal_v1_Chr5_+_22530007_22530007 1.04 AT5G55620.1
AT5G55620
hypothetical protein
arTal_v1_Chr5_-_8707885_8707885 1.04 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_18588792_18588792 1.04 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
arTal_v1_Chr1_+_5489145_5489145 1.03 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
arTal_v1_Chr5_+_3644547_3644547 1.03 AT5G11420.1
AT5G11420
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr4_+_18130237_18130237 1.03 AT4G38860.1
AT4G38860
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_6410947_6410947 1.03 AT1G18620.5
TRM3
LONGIFOLIA protein
arTal_v1_Chr5_-_3183984_3184110 1.02 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr1_-_4530222_4530222 1.02 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
arTal_v1_Chr3_+_20644843_20644843 1.02 AT3G55646.1
AT3G55646
TPRXL
arTal_v1_Chr5_-_17005510_17005510 1.01 AT5G42530.1
AT5G42530
hypothetical protein
arTal_v1_Chr3_+_17949416_17949416 1.01 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_+_25523827_25523827 1.01 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr5_+_21582614_21582614 1.01 AT5G53200.1
TRY
Homeodomain-like superfamily protein
arTal_v1_Chr4_-_13398307_13398307 1.00 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
arTal_v1_Chr5_+_25524045_25524045 1.00 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr1_+_6410033_6410033 0.99 AT1G18620.2
TRM3
LONGIFOLIA protein
arTal_v1_Chr1_-_7043392_7043392 0.99 AT1G20340.1
DRT112
Cupredoxin superfamily protein
arTal_v1_Chr5_-_3190321_3190321 0.99 AT5G10170.1
MIPS3
myo-inositol-1-phosphate synthase 3
arTal_v1_Chr5_-_3183484_3183484 0.98 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr1_-_8183570_8183650 0.98 AT1G23080.2
AT1G23080.3
AT1G23080.4
AT1G23080.1
PIN7
Auxin efflux carrier family protein
arTal_v1_Chr3_+_2712236_2712236 0.98 AT3G08920.1
AT3G08920
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr4_+_493546_493548 0.98 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
arTal_v1_Chr5_-_18026077_18026077 0.97 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
arTal_v1_Chr5_-_23561944_23562001 0.97 AT5G58260.2
AT5G58260.1
NdhN
oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor
arTal_v1_Chr5_-_9082384_9082384 0.97 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
arTal_v1_Chr1_+_24647121_24647121 0.96 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
arTal_v1_Chr4_-_15931332_15931422 0.95 AT4G33010.2
AT4G33010.1
GLDP1
glycine decarboxylase P-protein 1
arTal_v1_Chr3_+_4510965_4510965 0.95 AT3G13750.1
BGAL1
beta galactosidase 1
arTal_v1_Chr4_-_11885533_11885533 0.94 AT4G22570.2
AT4G22570.1
APT3
adenine phosphoribosyl transferase 3
arTal_v1_Chr1_-_6940832_6940832 0.94 AT1G20010.1
TUB5
tubulin beta-5 chain
arTal_v1_Chr3_+_6510982_6510982 0.93 AT3G18890.1
Tic62
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_20447157_20447208 0.93 AT1G54820.1
AT1G54820.2
AT1G54820.3
AT1G54820.4
AT1G54820
Protein kinase superfamily protein
arTal_v1_Chr5_+_625254_625254 0.93 AT5G02760.1
AT5G02760
Protein phosphatase 2C family protein
arTal_v1_Chr5_+_25727126_25727268 0.93 AT5G64330.1
AT5G64330.2
AT5G64330.3
NPH3
Phototropic-responsive NPH3 family protein
arTal_v1_Chr1_+_907523_907651 0.93 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
arTal_v1_Chr2_+_11089123_11089123 0.92 AT2G26020.1
PDF1.2b
plant defensin 1.2b
arTal_v1_Chr4_+_12876822_12876948 0.92 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
arTal_v1_Chr1_+_2047886_2047886 0.91 AT1G06680.2
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_+_2047634_2047634 0.91 AT1G06680.1
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr5_-_17581275_17581275 0.91 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
arTal_v1_Chr3_-_17837998_17837998 0.91 AT3G48200.1
AT3G48200
transmembrane protein
arTal_v1_Chr2_-_15474717_15474828 0.90 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
arTal_v1_Chr2_+_6518749_6518749 0.90 AT2G15050.3
AT2G15050.1
AT2G15050.2
LTP
lipid transfer protein
arTal_v1_Chr5_+_24494291_24494291 0.90 AT5G60890.1
MYB34
myb domain protein 34
arTal_v1_Chr3_+_22086333_22086333 0.90 AT3G59780.1
AT3G59780
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr2_-_11727654_11727654 0.89 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
arTal_v1_Chr5_+_7502427_7502427 0.89 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
arTal_v1_Chr3_+_10524181_10524181 0.89 AT3G28220.1
AT3G28220
TRAF-like family protein
arTal_v1_Chr1_+_4899045_4899045 0.88 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr4_+_18126057_18126057 0.88 AT4G38850.1
SAUR15
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_24062804_24062804 0.87 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
arTal_v1_Chr3_+_10547441_10547441 0.87 AT3G28290.1
AT14A
transmembrane protein, putative (DUF677)
arTal_v1_Chr1_-_19052582_19052582 0.87 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
arTal_v1_Chr1_+_6927736_6927736 0.87 AT1G19960.1
AT1G19960
transcription factor
arTal_v1_Chr3_-_9375671_9375671 0.86 AT3G25717.1
RTFL16
ROTUNDIFOLIA like 16
arTal_v1_Chr1_+_28458691_28458691 0.85 AT1G75800.1
AT1G75800
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr3_+_5358601_5358601 0.85 AT3G15850.1
FAD5
fatty acid desaturase 5
arTal_v1_Chr1_-_23137254_23137254 0.85 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_+_22902491_22902638 0.85 AT3G61870.1
AT3G61870.2
AT3G61870
plant/protein
arTal_v1_Chr4_+_14192569_14192569 0.84 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
arTal_v1_Chr3_-_5469594_5469594 0.84 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr5_-_6222300_6222300 0.84 AT5G18660.1
PCB2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_20439383_20439383 0.84 AT1G54780.1
TLP18.3
thylakoid lumen 18.3 kDa protein
arTal_v1_Chr1_+_20101299_20101299 0.84 AT1G53840.1
PME1
pectin methylesterase 1
arTal_v1_Chr1_-_28245453_28245581 0.84 AT1G75250.1
AT1G75250.2
RL6
RAD-like 6
arTal_v1_Chr1_-_6319427_6319427 0.84 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_8338032_8338032 0.84 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
arTal_v1_Chr1_-_29485389_29485389 0.83 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
arTal_v1_Chr2_+_14384797_14384797 0.83 AT2G34060.1
AT2G34060
Peroxidase superfamily protein
arTal_v1_Chr1_-_18413016_18413016 0.83 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr3_+_8586359_8586359 0.83 AT3G23805.1
RALFL24
ralf-like 24
arTal_v1_Chr5_-_2995307_2995307 0.82 AT5G09660.2
PMDH2
peroxisomal NAD-malate dehydrogenase 2
arTal_v1_Chr5_-_2995512_2995512 0.82 AT5G09660.3
PMDH2
peroxisomal NAD-malate dehydrogenase 2
arTal_v1_Chr5_+_22175461_22175461 0.82 AT5G54585.1
AT5G54585
hypothetical protein
arTal_v1_Chr5_-_2995675_2995784 0.82 AT5G09660.5
AT5G09660.4
AT5G09660.1
PMDH2
peroxisomal NAD-malate dehydrogenase 2
arTal_v1_Chr2_+_17507343_17507343 0.81 AT2G41940.1
ZFP8
zinc finger protein 8
arTal_v1_Chr3_-_5271984_5271984 0.81 AT3G15570.1
AT3G15570
Phototropic-responsive NPH3 family protein
arTal_v1_Chr1_+_26705420_26705428 0.81 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
arTal_v1_Chr2_+_9259511_9259511 0.81 AT2G21650.1
MEE3
Homeodomain-like superfamily protein
arTal_v1_Chr5_+_4974671_4974671 0.81 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
arTal_v1_Chr5_+_16468327_16468344 0.81 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
arTal_v1_Chr3_-_23319636_23319636 0.81 AT3G63110.1
IPT3
isopentenyltransferase 3
arTal_v1_Chr2_+_9844134_9844230 0.80 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
arTal_v1_Chr3_+_188321_188384 0.80 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
arTal_v1_Chr2_+_10667898_10667898 0.80 AT2G25080.1
GPX1
glutathione peroxidase 1
arTal_v1_Chr4_+_12609373_12609373 0.80 AT4G24350.2
AT4G24350.4
AT4G24350.3
AT4G24350.1
AT4G24350
Phosphorylase superfamily protein
arTal_v1_Chr5_+_25969190_25969190 0.79 AT5G65010.2
ASN2
asparagine synthetase 2
arTal_v1_Chr2_+_18537177_18537177 0.79 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_25969035_25969035 0.79 AT5G65010.1
ASN2
asparagine synthetase 2
arTal_v1_Chr1_-_4265156_4265156 0.79 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
arTal_v1_Chr2_+_8059106_8059106 0.79 AT2G18560.1
AT2G18560
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_-_26468703_26468804 0.79 AT1G70280.1
AT1G70280.2
AT1G70280
NHL domain-containing protein
arTal_v1_Chr4_+_8360996_8360996 0.78 AT4G14560.1
IAA1
indole-3-acetic acid inducible
arTal_v1_Chr1_+_10371675_10371675 0.78 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_5058583_5058680 0.78 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
arTal_v1_Chr2_+_10856271_10856372 0.77 AT2G25510.1
AT2G25510.2
AT2G25510
transmembrane protein
arTal_v1_Chr4_-_15059846_15059846 0.77 AT4G30950.1
FAD6
fatty acid desaturase 6
arTal_v1_Chr3_+_7280792_7280792 0.77 AT3G20820.1
AT3G20820
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_13208683_13208683 0.77 AT1G35680.1
RPL21C
Ribosomal protein L21
arTal_v1_Chr2_+_11481326_11481326 0.77 AT2G26910.1
ABCG32
pleiotropic drug resistance 4
arTal_v1_Chr2_-_14325205_14325205 0.77 AT2G33855.1
AT2G33855
transmembrane protein
arTal_v1_Chr4_+_17986384_17986384 0.76 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
arTal_v1_Chr5_-_25373904_25373904 0.76 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
arTal_v1_Chr3_+_22373013_22373013 0.76 AT3G60530.1
GATA4
GATA transcription factor 4
arTal_v1_Chr1_+_20614573_20614610 0.76 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_+_6465748_6465748 0.76 AT3G18773.1
AT3G18773
RING/U-box superfamily protein
arTal_v1_Chr5_+_17937622_17937622 0.76 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
arTal_v1_Chr2_+_8063023_8063023 0.75 AT2G18570.1
AT2G18570
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_+_6942625_6942717 0.75 AT1G20020.1
AT1G20020.2
AT1G20020.3
FNR2
ferredoxin-NADP[+]-oxidoreductase 2
arTal_v1_Chr4_+_5550404_5550404 0.75 AT4G08685.1
SAH7
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_-_23873691_23873849 0.74 AT5G59130.1
AT5G59130.2
AT5G59130.3
AT5G59130.4
AT5G59130
Subtilase family protein
arTal_v1_Chr4_+_18296388_18296388 0.74 AT4G39350.1
CESA2
cellulose synthase A2
arTal_v1_Chr3_+_21982989_21982989 0.74 AT3G59480.1
AT3G59480
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr2_+_7964326_7964326 0.74 AT2G18328.1
RL4
RAD-like 4
arTal_v1_Chr5_-_19899301_19899301 0.74 AT5G49100.1
AT5G49100
vitellogenin-like protein
arTal_v1_Chr5_+_21170048_21170048 0.73 AT5G52100.1
CRR1
Dihydrodipicolinate reductase, bacterial/plant
arTal_v1_Chr1_+_21136835_21136835 0.73 AT1G56430.1
NAS4
nicotianamine synthase 4
arTal_v1_Chr5_-_4430901_4430901 0.73 AT5G13730.1
SIG4
sigma factor 4
arTal_v1_Chr3_-_1832190_1832190 0.73 AT3G06070.1
AT3G06070
hypothetical protein
arTal_v1_Chr2_-_13797237_13797237 0.73 AT2G32500.2
AT2G32500.1
AT2G32500
Stress responsive alpha-beta barrel domain protein
arTal_v1_Chr1_+_18802552_18802552 0.73 AT1G50732.1
AT1G50732
transmembrane protein
arTal_v1_Chr2_-_16391073_16391176 0.73 AT2G39250.2
AT2G39250.1
SNZ
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_29352946_29352946 0.73 AT1G78060.1
AT1G78060
Glycosyl hydrolase family protein
arTal_v1_Chr4_-_8454144_8454159 0.72 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
arTal_v1_Chr4_-_8350030_8350030 0.72 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
arTal_v1_Chr5_-_3728726_3728726 0.72 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_2680401_2680401 0.72 AT5G08330.1
TCP11
TCP family transcription factor
arTal_v1_Chr4_-_1230164_1230164 0.72 AT4G02770.1
PSAD-1
photosystem I subunit D-1
arTal_v1_Chr3_+_3499537_3499537 0.72 AT3G11170.1
FAD7
fatty acid desaturase 7
arTal_v1_Chr3_+_10017321_10017321 0.72 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
arTal_v1_Chr3_+_251868_251868 0.72 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
arTal_v1_Chr4_+_10651744_10651744 0.71 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr1_-_16709713_16709713 0.71 AT1G44000.1
AT1G44000
STAY-GREEN-like protein
arTal_v1_Chr5_+_4535367_4535401 0.71 AT5G14060.1
AT5G14060.2
AT5G14060.3
CARAB-AK-LYS
Aspartate kinase family protein
arTal_v1_Chr1_+_25374072_25374222 0.71 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
arTal_v1_Chr1_-_22308289_22308289 0.71 AT1G60550.1
ECHID
enoyl-CoA hydratase/isomerase D
arTal_v1_Chr5_+_17148808_17148923 0.71 AT5G42760.2
AT5G42760.1
AT5G42760
Leucine carboxyl methyltransferase
arTal_v1_Chr1_-_26515188_26515255 0.71 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr5_-_5365391_5365391 0.70 AT5G16400.1
TRXF2
thioredoxin F2
arTal_v1_Chr4_-_16583075_16583075 0.70 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
arTal_v1_Chr5_-_20712386_20712473 0.70 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_14677661_14677695 0.70 AT4G30020.2
AT4G30020.3
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr5_+_26151333_26151422 0.70 AT5G65440.5
AT5G65440.4
AT5G65440.2
AT5G65440.1
AT5G65440.3
AT5G65440.7
AT5G65440.9
AT5G65440.8
AT5G65440.6
AT5G65440
transmembrane protein
arTal_v1_Chr2_-_12542465_12542465 0.70 AT2G29170.1
AT2G29170
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_-_20940895_20940895 0.70 AT5G51550.1
EXL3
EXORDIUM like 3
arTal_v1_Chr4_-_8016582_8016582 0.69 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
arTal_v1_Chr2_+_13624751_13624792 0.69 AT2G32010.1
AT2G32010.3
AT2G32010.2
AT2G32010.4
CVL1
CVP2 like 1
arTal_v1_Chr4_-_2332814_2332814 0.69 AT4G04630.1
AT4G04630
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr4_+_17583992_17583992 0.69 AT4G37400.1
CYP81F3
cytochrome P450, family 81, subfamily F, polypeptide 3
arTal_v1_Chr2_-_11173278_11173278 0.69 AT2G26250.1
KCS10
3-ketoacyl-CoA synthase 10

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G31140

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.5 GO:0080093 regulation of photorespiration(GO:0080093)
0.5 1.5 GO:0001894 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.5 6.1 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.5 1.4 GO:0015840 urea transport(GO:0015840)
0.5 4.1 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.4 1.2 GO:0035017 cuticle pattern formation(GO:0035017)
0.3 0.3 GO:0060919 auxin influx(GO:0060919)
0.3 1.7 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.3 1.0 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.3 0.9 GO:0071266 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.3 0.6 GO:0019755 one-carbon compound transport(GO:0019755)
0.3 0.6 GO:0018023 peptidyl-lysine trimethylation(GO:0018023)
0.3 1.5 GO:1903960 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.3 1.7 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.3 0.9 GO:0071461 cellular response to redox state(GO:0071461)
0.3 2.0 GO:0009099 valine biosynthetic process(GO:0009099)
0.3 0.8 GO:0070584 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.3 2.4 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.3 1.1 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.3 2.7 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.3 1.9 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.3 0.5 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.3 1.6 GO:0070981 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.3 1.8 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 0.8 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.3 0.8 GO:0080051 cutin transport(GO:0080051)
0.2 1.0 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.2 0.7 GO:0009234 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.2 0.7 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.2 0.9 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 0.5 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.4 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.2 2.3 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 2.3 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.2 1.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 1.9 GO:0015976 carbon utilization(GO:0015976)
0.2 1.9 GO:0010206 photosystem II repair(GO:0010206)
0.2 1.7 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 0.6 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 0.7 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.6 GO:0008645 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.2 0.2 GO:0031114 regulation of microtubule depolymerization(GO:0031114)
0.2 0.5 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 1.6 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.2 1.0 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.2 1.8 GO:0030104 water homeostasis(GO:0030104)
0.2 3.6 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.2 0.8 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.2 0.5 GO:0090143 nucleoid organization(GO:0090143)
0.2 2.8 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.2 1.0 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 1.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.2 0.9 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 0.5 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 0.5 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.2 0.6 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.2 0.8 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.1 0.4 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.1 0.4 GO:0048255 mRNA stabilization(GO:0048255)
0.1 1.5 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 1.5 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.4 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.9 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 1.3 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.1 0.4 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.4 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.1 0.4 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.1 0.4 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.7 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 2.6 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 3.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 1.0 GO:0006546 glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 2.1 GO:0010315 auxin efflux(GO:0010315)
0.1 1.3 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.1 4.0 GO:0006284 base-excision repair(GO:0006284)
0.1 0.8 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.8 GO:0000719 photoreactive repair(GO:0000719)
0.1 1.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 1.0 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 0.4 GO:0043471 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.1 0.6 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 1.7 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 1.4 GO:0009085 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.4 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.4 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.4 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 0.6 GO:0046713 borate transport(GO:0046713)
0.1 2.1 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.2 GO:0017145 stem cell division(GO:0017145)
0.1 0.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 0.4 GO:0048462 carpel formation(GO:0048462)
0.1 0.7 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.1 0.6 GO:0019218 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 2.1 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.2 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 0.9 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.8 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.5 GO:0000023 maltose metabolic process(GO:0000023)
0.1 7.8 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.6 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.9 GO:0010359 regulation of anion channel activity(GO:0010359)
0.1 0.3 GO:0080117 secondary growth(GO:0080117)
0.1 0.5 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.5 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.1 0.5 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.3 GO:0010451 floral meristem growth(GO:0010451)
0.1 1.4 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 1.3 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 2.1 GO:0006949 syncytium formation(GO:0006949)
0.1 0.6 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.7 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.4 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203) UDP-glucuronate metabolic process(GO:0046398)
0.1 0.1 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.1 0.4 GO:0010070 zygote asymmetric cell division(GO:0010070)
0.1 0.3 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.1 2.7 GO:0016132 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.1 0.4 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.3 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.3 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.4 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.8 GO:0010065 primary meristem tissue development(GO:0010065)
0.1 0.7 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.2 GO:0080005 photosystem stoichiometry adjustment(GO:0080005)
0.1 0.6 GO:0048533 sporocyte differentiation(GO:0048533)
0.1 0.3 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.4 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.3 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.2 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.1 1.5 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.1 0.3 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.4 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.1 0.5 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.4 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.7 GO:0098586 cellular response to virus(GO:0098586)
0.1 1.6 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 0.3 GO:0042873 phosphoglycerate transport(GO:0015713) phosphoenolpyruvate transport(GO:0015714) aldonate transport(GO:0042873)
0.1 1.0 GO:0044070 regulation of anion transport(GO:0044070)
0.1 0.3 GO:0071486 cellular response to high light intensity(GO:0071486)
0.1 0.9 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 0.4 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.9 GO:0010044 response to aluminum ion(GO:0010044)
0.1 0.3 GO:0007000 nucleolus organization(GO:0007000)
0.1 1.3 GO:0010274 hydrotropism(GO:0010274)
0.1 1.3 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 1.1 GO:0009750 response to fructose(GO:0009750)
0.1 1.1 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 0.3 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.9 GO:0046292 formaldehyde metabolic process(GO:0046292)
0.1 0.3 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 1.1 GO:0007143 female meiotic division(GO:0007143)
0.1 4.8 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.1 0.2 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 0.3 GO:0042539 hypotonic salinity response(GO:0042539)
0.1 0.4 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.7 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 2.7 GO:0042335 cuticle development(GO:0042335)
0.1 0.3 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.2 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 2.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.7 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.8 GO:2000034 regulation of seed maturation(GO:2000034)
0.1 0.3 GO:0006824 cobalt ion transport(GO:0006824)
0.1 0.4 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.1 0.3 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.1 0.2 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.6 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.1 0.2 GO:0009093 cysteine catabolic process(GO:0009093)
0.1 2.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 0.4 GO:0035864 response to potassium ion(GO:0035864)
0.1 0.8 GO:0036065 fucosylation(GO:0036065)
0.1 0.2 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.3 GO:0019627 urea metabolic process(GO:0019627)
0.1 0.2 GO:0071158 regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.1 0.3 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 0.2 GO:0036265 RNA (guanine-N7)-methylation(GO:0036265) rRNA (guanine-N7)-methylation(GO:0070476)
0.1 0.6 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.1 2.2 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.4 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.1 0.4 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.5 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.4 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.8 GO:0010098 suspensor development(GO:0010098)
0.1 0.5 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 0.2 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.1 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.1 0.3 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1 0.7 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 5.1 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.5 GO:0042350 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.1 0.1 GO:0072718 response to cisplatin(GO:0072718)
0.1 0.9 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 2.2 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 0.3 GO:0032418 lysosome localization(GO:0032418)
0.1 0.6 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.2 GO:0010117 photoprotection(GO:0010117)
0.1 0.4 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 1.4 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.2 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.1 0.1 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.1 0.8 GO:0048829 root cap development(GO:0048829)
0.1 1.2 GO:0009638 phototropism(GO:0009638)
0.1 0.3 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.2 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 0.5 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.5 GO:0072387 FAD metabolic process(GO:0046443) flavin adenine dinucleotide metabolic process(GO:0072387)
0.1 0.6 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.3 GO:0019747 regulation of isoprenoid metabolic process(GO:0019747)
0.1 0.5 GO:0000132 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 0.2 GO:0032409 regulation of transporter activity(GO:0032409)
0.1 0.6 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.1 0.4 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.3 GO:1901271 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 3.6 GO:0015979 photosynthesis(GO:0015979)
0.1 0.8 GO:0046653 tetrahydrofolate metabolic process(GO:0046653)
0.1 1.0 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 0.2 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.5 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.1 0.2 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 1.2 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.2 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.1 0.2 GO:0051639 actin filament network formation(GO:0051639)
0.1 1.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.3 GO:0097502 mannosylation(GO:0097502)
0.1 0.3 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.3 GO:0044848 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.1 0.3 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.3 GO:0034329 cell-cell junction assembly(GO:0007043) cell junction assembly(GO:0034329)
0.1 1.0 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 0.2 GO:0048479 style development(GO:0048479)
0.1 0.2 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.1 GO:0034969 histone arginine methylation(GO:0034969)
0.1 0.3 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.1 GO:0060771 phyllotactic patterning(GO:0060771)
0.1 0.4 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 0.3 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.3 GO:0070127 tRNA aminoacylation for mitochondrial protein translation(GO:0070127)
0.0 2.1 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.4 GO:0010088 phloem development(GO:0010088)
0.0 0.1 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.0 0.2 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.0 0.2 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.6 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.6 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.2 GO:0042391 regulation of membrane potential(GO:0042391)
0.0 0.3 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.0 0.3 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.0 0.1 GO:1903725 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322) regulation of phospholipid biosynthetic process(GO:0071071) regulation of phospholipid metabolic process(GO:1903725)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.0 0.7 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.3 GO:0010161 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.0 0.0 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.3 GO:0036260 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.0 0.3 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.2 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.0 0.2 GO:0019673 GDP-mannose biosynthetic process(GO:0009298) GDP-mannose metabolic process(GO:0019673)
0.0 0.1 GO:1902969 mitotic DNA replication(GO:1902969)
0.0 1.3 GO:0005991 trehalose metabolic process(GO:0005991)
0.0 0.1 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.0 0.2 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.1 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.0 0.1 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.0 0.1 GO:0033260 nuclear DNA replication(GO:0033260)
0.0 1.6 GO:0010089 xylem development(GO:0010089)
0.0 0.2 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 1.1 GO:0009902 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.0 0.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.2 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.2 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.0 0.1 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.2 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 1.9 GO:0009630 gravitropism(GO:0009630)
0.0 0.2 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.0 0.7 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.9 GO:0008360 regulation of cell shape(GO:0008360)
0.0 1.1 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.5 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.2 GO:0009635 response to herbicide(GO:0009635)
0.0 0.2 GO:0035337 fatty-acyl-CoA metabolic process(GO:0035337) fatty-acyl-CoA biosynthetic process(GO:0046949)
0.0 0.4 GO:0001709 cell fate determination(GO:0001709)
0.0 0.4 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.0 0.2 GO:0043692 monoterpene metabolic process(GO:0043692)
0.0 0.1 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.1 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 0.2 GO:0051415 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.0 0.1 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.3 GO:0006779 porphyrin-containing compound biosynthetic process(GO:0006779)
0.0 0.3 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.7 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.5 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.3 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.3 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.5 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.1 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.1 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.0 0.4 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.1 GO:0034059 response to anoxia(GO:0034059)
0.0 0.3 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.1 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.0 2.1 GO:0009875 pollen-pistil interaction(GO:0009875)
0.0 0.4 GO:0052543 callose deposition in cell wall(GO:0052543)
0.0 0.3 GO:0000966 RNA 5'-end processing(GO:0000966)
0.0 0.2 GO:0080121 AMP transport(GO:0080121)
0.0 0.3 GO:0010152 pollen maturation(GO:0010152)
0.0 0.1 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.2 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.8 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.1 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.0 1.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.1 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.0 0.1 GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.3 GO:0032042 mitochondrial DNA metabolic process(GO:0032042)
0.0 0.1 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 0.1 GO:0007142 male meiosis II(GO:0007142)
0.0 0.1 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.0 0.2 GO:0045840 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of chromosome segregation(GO:0051984) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.4 GO:0042593 glucose homeostasis(GO:0042593)
0.0 0.4 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:0015846 polyamine transport(GO:0015846)
0.0 0.2 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.6 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.6 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.2 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.9 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 0.1 GO:0071265 L-methionine biosynthetic process(GO:0071265)
0.0 0.3 GO:0010025 wax biosynthetic process(GO:0010025)
0.0 0.1 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 0.2 GO:0051552 flavone metabolic process(GO:0051552) flavone biosynthetic process(GO:0051553) flavonol metabolic process(GO:0051554) flavonol biosynthetic process(GO:0051555)
0.0 0.3 GO:2000377 regulation of reactive oxygen species metabolic process(GO:2000377)
0.0 0.1 GO:0006449 regulation of translational termination(GO:0006449)
0.0 0.6 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.0 0.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.3 GO:0042439 ethanolamine-containing compound metabolic process(GO:0042439)
0.0 0.1 GO:0099636 cytoplasmic streaming(GO:0099636)
0.0 0.1 GO:0010358 leaf shaping(GO:0010358)
0.0 0.1 GO:0016120 carotene biosynthetic process(GO:0016120)
0.0 0.3 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0015918 sterol transport(GO:0015918)
0.0 0.2 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.1 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.4 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.1 GO:0010289 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 1.1 GO:0042545 cell wall modification(GO:0042545)
0.0 0.1 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.2 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.1 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.1 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.1 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.0 0.1 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.2 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.0 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.0 0.3 GO:0098727 stem cell population maintenance(GO:0019827) maintenance of cell number(GO:0098727)
0.0 0.0 GO:0036292 DNA rewinding(GO:0036292)
0.0 0.1 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.2 GO:0043966 histone H3 acetylation(GO:0043966)
0.0 0.2 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.3 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.1 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.0 0.1 GO:0034367 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.0 0.1 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.2 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.4 GO:0009142 nucleoside triphosphate biosynthetic process(GO:0009142)
0.0 0.0 GO:2001006 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.0 0.1 GO:0016554 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.0 0.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.4 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.1 GO:0016572 histone phosphorylation(GO:0016572)
0.0 0.1 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.0 0.6 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.2 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.1 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0043235 receptor complex(GO:0043235)
0.4 1.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.3 1.5 GO:0009897 external side of plasma membrane(GO:0009897)
0.3 1.4 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 3.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 8.7 GO:0010319 stromule(GO:0010319)
0.2 5.0 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.2 1.6 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 1.0 GO:0005960 glycine cleavage complex(GO:0005960)
0.2 2.5 GO:0045298 tubulin complex(GO:0045298)
0.2 0.8 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 0.7 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 1.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.2 1.6 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.2 0.5 GO:0005775 vacuolar lumen(GO:0005775)
0.2 1.5 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 0.4 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 1.3 GO:0010168 ER body(GO:0010168)
0.1 0.6 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 2.4 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.5 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 3.4 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.1 0.5 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.7 GO:0005787 signal peptidase complex(GO:0005787)
0.1 29.8 GO:0031976 plastid thylakoid(GO:0031976)
0.1 1.4 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.3 GO:0031977 thylakoid lumen(GO:0031977)
0.1 0.7 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 0.9 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.3 GO:0043186 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.5 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 16.0 GO:0009505 plant-type cell wall(GO:0009505)
0.1 4.9 GO:0009579 thylakoid(GO:0009579)
0.1 1.1 GO:0005720 nuclear heterochromatin(GO:0005720)
0.1 2.8 GO:0009528 plastid inner membrane(GO:0009528)
0.1 15.9 GO:0048046 apoplast(GO:0048046)
0.1 1.3 GO:0009574 preprophase band(GO:0009574)
0.1 0.3 GO:0090397 stigma papilla(GO:0090397)
0.1 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.2 GO:0032432 actin filament bundle(GO:0032432)
0.1 0.6 GO:0009986 cell surface(GO:0009986)
0.1 0.2 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.1 0.2 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.1 0.5 GO:0042555 MCM complex(GO:0042555)
0.1 22.0 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.1 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.4 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0010369 chromocenter(GO:0010369)
0.0 0.3 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 1.0 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.7 GO:0005876 spindle microtubule(GO:0005876)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.4 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.8 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.3 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.0 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 0.2 GO:0031209 SCAR complex(GO:0031209)
0.0 0.8 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.2 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 0.2 GO:0000777 condensed chromosome kinetochore(GO:0000777) condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.4 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.6 GO:0005871 kinesin complex(GO:0005871)
0.0 0.2 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 2.0 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0044545 NSL complex(GO:0044545)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.0 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 3.7 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.5 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.8 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 32.3 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0030663 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.0 0.1 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.1 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.0 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.6 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.0 GO:0042788 polysomal ribosome(GO:0042788)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.8 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.5 1.6 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.5 1.6 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.5 1.5 GO:0015026 coreceptor activity(GO:0015026)
0.5 1.4 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.4 2.1 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.4 2.3 GO:0004121 cystathionine beta-lyase activity(GO:0004121)
0.4 3.4 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.4 1.1 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.3 1.0 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.3 1.2 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 2.4 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.3 9.7 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 0.9 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.3 2.3 GO:0019137 thioglucosidase activity(GO:0019137)
0.3 1.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 1.1 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.3 1.9 GO:0016211 glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.3 1.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.3 0.8 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.3 2.1 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.3 1.5 GO:0051723 protein methylesterase activity(GO:0051723)
0.2 1.5 GO:0004970 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.2 1.0 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.2 2.0 GO:0008083 growth factor activity(GO:0008083)
0.2 1.4 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.2 0.7 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.2 2.5 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.2 0.8 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.2 1.6 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 1.0 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.2 0.8 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 1.5 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.2 0.9 GO:0004072 aspartate kinase activity(GO:0004072)
0.2 1.7 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.2 2.1 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 1.7 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.2 0.9 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.2 0.9 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 0.5 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.2 0.7 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 2.5 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.2 0.5 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.2 0.7 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.2 2.1 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 1.0 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 1.4 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.2 0.8 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 0.5 GO:0010297 4-alpha-glucanotransferase activity(GO:0004134) heteropolysaccharide binding(GO:0010297)
0.2 1.2 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 3.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 0.5 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 1.1 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.2 0.5 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.4 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.1 0.9 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.4 GO:0004560 alpha-L-fucosidase activity(GO:0004560) fucosidase activity(GO:0015928)
0.1 1.1 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.8 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 2.6 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.5 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.1 0.4 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 1.7 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 1.2 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.4 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.5 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 0.6 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.1 0.5 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 0.5 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.4 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.6 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.4 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.1 0.4 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.1 1.3 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 1.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.5 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.1 1.4 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.1 0.3 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.5 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 2.6 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 2.2 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 1.1 GO:2001070 starch binding(GO:2001070)
0.1 0.3 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.4 GO:0016420 malonyltransferase activity(GO:0016420)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.4 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.1 0.6 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.4 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 0.3 GO:0047912 galacturonokinase activity(GO:0047912)
0.1 0.8 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.3 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.1 1.0 GO:0009378 four-way junction helicase activity(GO:0009378)
0.1 0.4 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.4 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 3.0 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.4 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.1 0.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 0.7 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.7 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.3 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 0.2 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.1 0.3 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 0.9 GO:0004096 catalase activity(GO:0004096)
0.1 0.3 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.1 0.3 GO:0035671 enone reductase activity(GO:0035671)
0.1 0.4 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.4 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.6 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.1 0.3 GO:0004359 glutaminase activity(GO:0004359)
0.1 0.6 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.3 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.5 GO:0048365 Rac GTPase binding(GO:0048365)
0.1 0.5 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.8 GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903)
0.1 0.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.5 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 0.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.4 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.5 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 0.9 GO:0070568 guanylyltransferase activity(GO:0070568)
0.1 0.4 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 1.0 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.3 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.9 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.6 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 1.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.1 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.2 GO:0016435 rRNA (guanine) methyltransferase activity(GO:0016435)
0.1 0.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 5.6 GO:0003777 microtubule motor activity(GO:0003777)
0.1 0.5 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.2 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 0.4 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.6 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 0.2 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 0.6 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.1 0.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.8 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 0.3 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 1.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.2 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 0.6 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.1 0.3 GO:0008430 selenium binding(GO:0008430)
0.1 0.3 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 0.3 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.2 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.1 0.3 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.3 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.3 GO:0035197 siRNA binding(GO:0035197)
0.1 0.9 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 1.6 GO:0008810 cellulase activity(GO:0008810)
0.1 0.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.6 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 0.2 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 2.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 2.8 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 0.4 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.4 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 2.0 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.6 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.1 0.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 2.2 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.1 0.2 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.6 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.4 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.3 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.3 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 0.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.2 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.2 GO:0016842 amidine-lyase activity(GO:0016842)
0.1 0.9 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.2 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.1 1.7 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.5 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 1.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 1.3 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.1 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.1 0.5 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 1.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.4 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.2 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.0 0.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.0 0.2 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.2 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.0 1.0 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.6 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.2 GO:0019172 glyoxalase III activity(GO:0019172)
0.0 0.4 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.0 0.2 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.5 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 0.2 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.0 0.4 GO:0005536 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.3 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.0 0.1 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.0 0.2 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 0.2 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 2.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.9 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.2 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.3 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.1 GO:0010331 gibberellin binding(GO:0010331)
0.0 0.1 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.0 0.1 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0 0.1 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.0 0.7 GO:0031559 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 0.5 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 4.4 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0070704 sterol desaturase activity(GO:0070704)
0.0 0.1 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 1.5 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.3 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.1 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.0 0.2 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.7 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.4 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.6 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.2 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.2 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.2 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.4 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.2 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.1 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.2 GO:0050551 myrcene synthase activity(GO:0050551)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.2 GO:0019239 deaminase activity(GO:0019239)
0.0 2.2 GO:0030246 carbohydrate binding(GO:0030246)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.1 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.1 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.2 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0097001 sphingolipid binding(GO:0046625) ceramide binding(GO:0097001)
0.0 0.1 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.3 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 5.1 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.8 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.3 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.6 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.5 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.6 GO:0005179 hormone activity(GO:0005179)
0.0 0.1 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.0 0.2 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.1 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.2 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.3 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.7 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.1 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.0 2.8 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.2 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.0 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.0 0.4 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.2 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.6 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.1 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.1 GO:0035173 histone kinase activity(GO:0035173)
0.0 0.1 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.1 GO:0003917 DNA topoisomerase activity(GO:0003916) DNA topoisomerase type I activity(GO:0003917)
0.0 0.1 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 1.9 GO:0043531 ADP binding(GO:0043531)
0.0 0.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.2 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.3 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0015301 anion:anion antiporter activity(GO:0015301)
0.0 0.1 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.5 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.1 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.2 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.0 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.0 0.1 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 5.5 PID CMYB PATHWAY C-MYB transcription factor network
0.3 0.9 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.3 1.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.5 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.5 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.1 1.1 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.1 0.3 PID ATM PATHWAY ATM pathway
0.1 0.6 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 0.2 PID BARD1 PATHWAY BARD1 signaling events
0.1 0.6 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.2 PID P73PATHWAY p73 transcription factor network
0.1 0.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.3 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 PID ENDOTHELIN PATHWAY Endothelins
0.0 0.1 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.0 0.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.1 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID INTEGRIN3 PATHWAY Beta3 integrin cell surface interactions
0.0 0.0 PID TCPTP PATHWAY Signaling events mediated by TCPTP

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 8.1 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.3 0.9 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.3 0.8 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.3 0.8 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.2 0.2 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.1 0.7 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.5 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.5 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.3 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.4 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.1 0.2 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.1 0.2 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.1 0.2 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.4 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.1 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.0 0.2 REACTOME CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX Genes involved in CDT1 association with the CDC6:ORC:origin complex
0.0 0.1 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.0 0.3 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.0 0.1 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.0 0.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.0 0.1 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.0 0.2 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.1 REACTOME NUCLEAR SIGNALING BY ERBB4 Genes involved in Nuclear signaling by ERBB4