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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G45249

Z-value: 0.69

Transcription factors associated with AT1G45249

Gene Symbol Gene ID Gene Info
AT1G45249
AT1G45249 abscisic acid responsive elements-binding factor 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ABF2arTal_v1_Chr1_-_17167741_17167924-0.781.2e-06Click!

Activity profile of AT1G45249 motif

Sorted Z-values of AT1G45249 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_+_10255906_10255941 4.38 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
arTal_v1_Chr1_+_3157501_3157501 4.26 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_15378416_15378416 4.10 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr5_-_15378642_15378642 4.09 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr4_-_7493080_7493080 3.58 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
arTal_v1_Chr2_+_14577083_14577083 3.37 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
arTal_v1_Chr4_-_17777445_17777445 3.35 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
arTal_v1_Chr1_+_6612630_6612630 3.23 AT1G19150.1
Lhca6
PSI type II chlorophyll a/b-binding protein (Lhca2*1)
arTal_v1_Chr5_+_26298728_26298728 3.21 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
arTal_v1_Chr2_+_16130290_16130290 3.20 AT2G38540.1
LP1
lipid transfer protein 1
arTal_v1_Chr1_-_10475969_10475969 3.08 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
arTal_v1_Chr1_-_59215_59215 3.01 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr3_+_17228642_17228642 2.98 AT3G46780.1
PTAC16
plastid transcriptionally active 16
arTal_v1_Chr5_-_4392227_4392227 2.98 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr5_-_4392429_4392429 2.98 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr1_-_25049424_25049424 2.86 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_-_25049667_25049667 2.86 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr3_+_23345754_23345754 2.83 AT3G63200.1
PLP9
PATATIN-like protein 9
arTal_v1_Chr5_+_4087689_4087689 2.78 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_-_598657_598657 2.76 AT1G02730.1
CSLD5
cellulose synthase-like D5
arTal_v1_Chr1_-_1043887_1043887 2.75 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
arTal_v1_Chr1_+_7886323_7886323 2.67 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr1_-_21614169_21614169 2.63 AT1G58270.1
ZW9
TRAF-like family protein
arTal_v1_Chr2_+_17592038_17592038 2.62 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr1_-_5447880_5447880 2.59 AT1G15820.1
LHCB6
light harvesting complex photosystem II subunit 6
arTal_v1_Chr1_+_17918207_17918207 2.57 AT1G48480.1
RKL1
receptor-like kinase 1
arTal_v1_Chr4_+_11334352_11334402 2.56 AT4G21280.1
AT4G21280.2
PSBQA
photosystem II subunit QA
arTal_v1_Chr2_-_15789605_15789605 2.54 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr2_-_15790139_15790139 2.50 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
arTal_v1_Chr1_+_907523_907651 2.47 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
arTal_v1_Chr5_-_7026533_7026533 2.42 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_-_7377186_7377226 2.40 AT3G21055.1
AT3G21055.2
PSBTN
photosystem II subunit T
arTal_v1_Chr1_-_84864_84946 2.38 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
arTal_v1_Chr1_-_4530222_4530222 2.37 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
arTal_v1_Chr3_-_20341103_20341176 2.34 AT3G54890.3
AT3G54890.4
AT3G54890.2
AT3G54890.1
LHCA1
chlorophyll a-b binding protein 6
arTal_v1_Chr1_+_898480_898480 2.29 AT1G03600.1
PSB27
photosystem II family protein
arTal_v1_Chr5_-_7026753_7026753 2.29 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_-_20903080_20903080 2.28 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr4_-_1026179_1026179 2.26 AT4G02320.1
AT4G02320
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_-_26515188_26515255 2.20 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr3_-_20576249_20576249 2.18 AT3G55500.1
EXPA16
expansin A16
arTal_v1_Chr1_-_9251659_9251659 2.18 AT1G26761.1
AT1G26761
Arabinanase/levansucrase/invertase
arTal_v1_Chr1_+_10810877_10810877 2.18 AT1G30520.4
AT1G30520.3
AAE14
acyl-activating enzyme 14
arTal_v1_Chr5_-_18371021_18371021 2.17 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr1_+_19454798_19454798 2.17 AT1G52230.1
PSAH2
photosystem I subunit H2
arTal_v1_Chr5_+_2680401_2680401 2.17 AT5G08330.1
TCP11
TCP family transcription factor
arTal_v1_Chr5_+_16410782_16410782 2.14 AT5G40950.1
RPL27
ribosomal protein large subunit 27
arTal_v1_Chr5_+_18945543_18945543 2.12 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
arTal_v1_Chr1_+_10810397_10810397 2.12 AT1G30520.1
AT1G30520.2
AAE14
acyl-activating enzyme 14
arTal_v1_Chr1_-_28554810_28554930 2.11 AT1G76100.1
AT1G76100.2
PETE1
plastocyanin 1
arTal_v1_Chr2_+_19243348_19243427 2.10 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
arTal_v1_Chr2_-_9130212_9130240 2.06 AT2G21330.3
AT2G21330.2
FBA1
fructose-bisphosphate aldolase 1
arTal_v1_Chr1_+_3664187_3664187 2.06 AT1G10960.1
FD1
ferredoxin 1
arTal_v1_Chr2_-_9130619_9130619 2.05 AT2G21330.1
FBA1
fructose-bisphosphate aldolase 1
arTal_v1_Chr5_-_3278461_3278461 2.02 AT5G10430.1
AGP4
arabinogalactan protein 4
arTal_v1_Chr4_-_9157133_9157133 2.02 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
arTal_v1_Chr1_-_6319427_6319427 2.02 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_16357421_16357421 2.01 AT4G34160.1
CYCD3%3B1
CYCLIN D3;1
arTal_v1_Chr1_+_23911024_23911024 2.00 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr1_+_20713499_20713499 2.00 AT1G55480.1
ZKT
protein containing PDZ domain, a K-box domain, and a TPR region
arTal_v1_Chr5_+_20945676_20945676 2.00 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_24990331_24990331 1.99 AT5G62220.1
GT18
glycosyltransferase 18
arTal_v1_Chr3_-_18559326_18559326 1.98 AT3G50060.1
MYB77
myb domain protein 77
arTal_v1_Chr3_+_21076505_21076505 1.98 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
arTal_v1_Chr1_-_11548016_11548016 1.96 AT1G32100.1
PRR1
pinoresinol reductase 1
arTal_v1_Chr1_-_4265156_4265156 1.95 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
arTal_v1_Chr1_+_4899045_4899045 1.93 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr3_-_5469594_5469594 1.92 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr5_-_25629615_25629708 1.91 AT5G64040.2
AT5G64040.1
PSAN
photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
arTal_v1_Chr2_-_15797059_15797059 1.91 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_+_19713799_19713799 1.91 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
arTal_v1_Chr3_-_18628888_18628914 1.90 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
arTal_v1_Chr4_+_160643_160643 1.89 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
arTal_v1_Chr5_-_26501955_26501955 1.88 AT5G66330.1
AT5G66330
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr2_-_17837618_17837618 1.88 AT2G42870.1
PAR1
phy rapidly regulated 1
arTal_v1_Chr3_-_6980523_6980523 1.86 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_+_15168533_15168533 1.86 AT2G36145.1
AT2G36145
hypothetical protein
arTal_v1_Chr1_-_6278150_6278258 1.84 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr4_-_18160158_18160158 1.84 AT4G38950.2
AT4G38950.1
AT4G38950.3
AT4G38950
ATP binding microtubule motor family protein
arTal_v1_Chr3_-_2130451_2130451 1.84 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_25374072_25374222 1.84 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
arTal_v1_Chr5_+_16768935_16768935 1.84 AT5G41900.1
AT5G41900
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_266559_266630 1.83 AT2G01590.1
AT2G01590.2
CRR3
chlororespiratory reduction 3
arTal_v1_Chr3_-_17495033_17495033 1.83 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
arTal_v1_Chr2_-_18914739_18914739 1.78 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
arTal_v1_Chr4_+_813048_813068 1.78 AT4G01883.1
AT4G01883.3
AT4G01883.2
AT4G01883
Polyketide cyclase / dehydrase and lipid transport protein
arTal_v1_Chr1_+_29117500_29117542 1.77 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
arTal_v1_Chr4_-_14204061_14204061 1.77 AT4G28750.1
PSAE-1
Photosystem I reaction centre subunit IV / PsaE protein
arTal_v1_Chr1_-_30113489_30113489 1.77 AT1G80050.2
APT2
adenine phosphoribosyl transferase 2
arTal_v1_Chr5_-_7242857_7242880 1.77 AT5G21920.2
AT5G21920.1
YLMG2
YGGT family protein
arTal_v1_Chr1_-_1169034_1169034 1.76 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
arTal_v1_Chr1_-_16709713_16709713 1.73 AT1G44000.1
AT1G44000
STAY-GREEN-like protein
arTal_v1_Chr3_-_10129937_10129937 1.73 AT3G27360.1
AT3G27360
Histone superfamily protein
arTal_v1_Chr4_-_18158873_18158873 1.73 AT4G38950.4
AT4G38950.5
AT4G38950
ATP binding microtubule motor family protein
arTal_v1_Chr3_+_8194606_8194711 1.71 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
arTal_v1_Chr2_+_19469571_19469612 1.71 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_2047886_2047886 1.69 AT1G06680.2
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_+_2047634_2047634 1.68 AT1G06680.1
PSBP-1
photosystem II subunit P-1
arTal_v1_Chr1_-_19052582_19052582 1.68 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
arTal_v1_Chr3_+_20709294_20709294 1.67 AT3G55800.1
SBPASE
sedoheptulose-bisphosphatase
arTal_v1_Chr4_-_17979740_17979885 1.67 AT4G38400.1
AT4G38401.1
EXLA2
AT4G38401
expansin-like A2
hypothetical protein
arTal_v1_Chr5_-_7738535_7738535 1.67 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
arTal_v1_Chr2_+_16912805_16912805 1.66 AT2G40490.1
HEME2
Uroporphyrinogen decarboxylase
arTal_v1_Chr1_-_30114010_30114010 1.66 AT1G80050.1
APT2
adenine phosphoribosyl transferase 2
arTal_v1_Chr4_+_11128941_11128993 1.64 AT4G20760.2
AT4G20760.1
AT4G20760
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_28078852_28078852 1.64 AT1G74730.1
AT1G74730
transmembrane protein, putative (DUF1118)
arTal_v1_Chr2_-_7768040_7768040 1.62 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr5_+_7778017_7778095 1.61 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
arTal_v1_Chr2_-_12885768_12885776 1.61 AT2G30200.2
AT2G30200.1
EMB3147
EMBRYO DEFECTIVE 3147
arTal_v1_Chr5_-_15828035_15828035 1.59 AT5G39530.1
AT5G39530.2
AT5G39530
hypothetical protein (DUF1997)
arTal_v1_Chr5_+_25159208_25159208 1.59 AT5G62670.1
HA11
H[+]-ATPase 11
arTal_v1_Chr1_+_12188678_12188678 1.58 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_568558_568558 1.57 AT1G02650.2
AT1G02650.1
AT1G02650
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_-_3709403_3709403 1.56 AT5G11550.1
AT5G11550
ARM repeat superfamily protein
arTal_v1_Chr2_-_18443405_18443405 1.56 AT2G44740.1
CYCP4%3B1
cyclin p4;1
arTal_v1_Chr5_+_20900859_20900860 1.55 AT5G51460.1
AT5G51460.4
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr4_-_9754161_9754161 1.54 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
arTal_v1_Chr3_+_21948851_21948851 1.54 AT3G59410.3
GCN2
protein kinase family protein
arTal_v1_Chr4_-_14002069_14002124 1.53 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
arTal_v1_Chr5_+_26671273_26671273 1.53 AT5G66800.1
AT5G66800
membrane-associated kinase regulator-like protein
arTal_v1_Chr5_-_1063425_1063425 1.52 AT5G03940.1
CPSRP54
chloroplast signal recognition particle 54 kDa subunit
arTal_v1_Chr4_+_10259600_10259600 1.51 AT4G18640.1
MRH1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_+_16049918_16049918 1.51 AT2G38310.1
PYL4
PYR1-like 4
arTal_v1_Chr2_-_13020311_13020311 1.49 AT2G30570.1
PSBW
photosystem II reaction center W
arTal_v1_Chr1_-_2641934_2641934 1.48 AT1G08380.1
PSAO
photosystem I subunit O
arTal_v1_Chr5_+_20902087_20902087 1.47 AT5G51460.2
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr4_-_9305763_9305845 1.47 AT4G16515.1
AT4G16515.2
RGF6
root meristem growth factor
arTal_v1_Chr3_+_21419449_21419517 1.46 AT3G57830.1
AT3G57830.2
AT3G57830.3
AT3G57830
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_18588792_18588792 1.46 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
arTal_v1_Chr1_+_22699715_22699715 1.45 AT1G61520.3
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr2_+_16869189_16869334 1.45 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
arTal_v1_Chr2_-_10063863_10063863 1.45 AT2G23670.1
YCF37
homolog of Synechocystis YCF37
arTal_v1_Chr2_-_8913747_8913747 1.44 AT2G20670.1
AT2G20670
sugar phosphate exchanger, putative (DUF506)
arTal_v1_Chr3_+_20890235_20890235 1.44 AT3G56330.1
AT3G56330
N2,N2-dimethylguanosine tRNA methyltransferase
arTal_v1_Chr4_-_8454144_8454159 1.44 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
arTal_v1_Chr3_-_7704958_7704958 1.43 AT3G21870.1
CYCP2%3B1
cyclin p2;1
arTal_v1_Chr3_-_4782452_4782452 1.43 AT3G14330.1
AT3G14330
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_20901835_20901835 1.43 AT5G51460.5
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_20779464_20779488 1.43 AT5G51110.2
AT5G51110.1
AT5G51110
Transcriptional coactivator/pterin dehydratase
arTal_v1_Chr1_+_22700073_22700073 1.43 AT1G61520.2
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr3_-_20797670_20797670 1.42 AT3G56040.1
UGP3
UDP-glucose pyrophosphorylase 3
arTal_v1_Chr1_+_22699893_22699893 1.42 AT1G61520.1
LHCA3
PSI type III chlorophyll a/b-binding protein
arTal_v1_Chr5_-_26845294_26845294 1.42 AT5G67280.1
RLK
receptor-like kinase
arTal_v1_Chr1_+_116784_116784 1.42 AT1G01300.1
AT1G01300
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_+_7676938_7676938 1.42 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
arTal_v1_Chr1_-_5265103_5265155 1.41 AT1G15290.2
AT1G15290.1
AT1G15290
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_20901537_20901537 1.41 AT5G51460.3
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr1_+_18802552_18802552 1.41 AT1G50732.1
AT1G50732
transmembrane protein
arTal_v1_Chr5_-_8412240_8412265 1.40 AT5G24580.3
AT5G24580.2
AT5G24580
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr5_-_26129547_26129547 1.40 AT5G65390.1
AGP7
arabinogalactan protein 7
arTal_v1_Chr1_-_3272110_3272110 1.38 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
arTal_v1_Chr2_+_19472573_19472573 1.37 AT2G47450.1
CAO
chloroplast signal recognition particle component (CAO)
arTal_v1_Chr4_+_455768_455768 1.37 AT4G01050.1
TROL
thylakoid rhodanese-like protein
arTal_v1_Chr4_+_455583_455583 1.36 AT4G01050.2
TROL
thylakoid rhodanese-like protein
arTal_v1_Chr2_+_8987584_8987584 1.36 AT2G20890.1
PSB29
photosystem II reaction center PSB29 protein
arTal_v1_Chr5_+_26281642_26281711 1.36 AT5G65700.1
AT5G65700.2
BAM1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_+_16745628_16745653 1.35 AT2G40100.1
AT2G40100.2
LHCB4.3
light harvesting complex photosystem II
arTal_v1_Chr1_+_4084162_4084162 1.35 AT1G12080.1
AT1G12080.2
AT1G12080
Vacuolar calcium-binding protein-like protein
arTal_v1_Chr4_-_13194124_13194124 1.35 AT4G25990.1
AT4G25990.3
CIL
CCT motif family protein
arTal_v1_Chr5_+_7676662_7676662 1.35 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
arTal_v1_Chr5_+_25243405_25243417 1.35 AT5G62890.3
AT5G62890.1
AT5G62890
Xanthine/uracil permease family protein
arTal_v1_Chr1_+_564018_564018 1.34 AT1G02640.1
BXL2
beta-xylosidase 2
arTal_v1_Chr5_+_2202364_2202397 1.34 AT5G07090.1
AT5G07090.3
AT5G07090.2
AT5G07090
Ribosomal protein S4 (RPS4A) family protein
arTal_v1_Chr4_+_16410791_16410791 1.34 AT4G34290.1
AT4G34290
SWIB/MDM2 domain superfamily protein
arTal_v1_Chr4_-_8240324_8240388 1.33 AT4G14310.2
AT4G14310.1
AT4G14310
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_30387602_30387602 1.33 AT1G80850.1
AT1G80850
DNA glycosylase superfamily protein
arTal_v1_Chr3_+_2167730_2167730 1.32 AT3G06868.1
AT3G06868
vitellogenin-like protein
arTal_v1_Chr5_-_8412453_8412512 1.32 AT5G24580.1
AT5G24580.4
AT5G24580
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr4_-_14950072_14950072 1.32 AT4G30620.1
AT4G30620
Putative BCR, YbaB family COG0718
arTal_v1_Chr5_+_3032375_3032375 1.32 AT5G09760.1
AT5G09760
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_-_3694200_3694200 1.32 AT1G11070.4
AT1G11070.2
AT1G11070.3
AT1G11070
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_+_5267063_5267204 1.31 AT3G15548.1
AT3G15550.1
AT3G15548
AT3G15550
transmembrane protein
trichohyalin
arTal_v1_Chr2_-_12355480_12355570 1.31 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_+_16467298_16467298 1.31 AT1G43670.1
FBP
Inositol monophosphatase family protein
arTal_v1_Chr4_-_13193620_13193620 1.30 AT4G25990.2
CIL
CCT motif family protein
arTal_v1_Chr1_+_4735474_4735474 1.30 AT1G13820.1
AT1G13820
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_25243148_25243251 1.30 AT5G62890.2
AT5G62890.4
AT5G62890
Xanthine/uracil permease family protein
arTal_v1_Chr1_+_7238693_7238693 1.30 AT1G20823.1
AT1G20823
RING/U-box superfamily protein
arTal_v1_Chr3_+_23229381_23229381 1.29 AT3G62820.1
AT3G62820
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr5_+_3032019_3032019 1.29 AT5G09760.2
AT5G09760
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr2_+_417427_417427 1.29 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr4_-_16606135_16606135 1.29 AT4G34830.1
MRL1
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr3_-_3003454_3003454 1.28 AT3G09780.1
CCR1
CRINKLY4 related 1
arTal_v1_Chr4_-_14627631_14627631 1.27 AT4G29905.1
AT4G29905
hypothetical protein
arTal_v1_Chr2_-_183639_183764 1.27 AT2G01420.3
AT2G01420.1
AT2G01420.2
PIN4
Auxin efflux carrier family protein
arTal_v1_Chr1_-_12054753_12054753 1.26 AT1G33240.1
AT1G33240.3
GTL1
GT-2-like 1
arTal_v1_Chr4_-_16773456_16773456 1.26 AT4G35250.1
HCF244
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_23000188_23000221 1.26 AT3G62110.2
AT3G62110.1
AT3G62110
Pectin lyase-like superfamily protein
arTal_v1_Chr5_+_26572265_26572265 1.25 AT5G66580.1
AT5G66580
hypothetical protein
arTal_v1_Chr5_+_24940203_24940396 1.25 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BAG2
BCL-2-associated athanogene 2
arTal_v1_Chr5_+_19179881_19179881 1.25 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
arTal_v1_Chr2_+_18842516_18842516 1.24 AT2G45750.1
AT2G45750
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_+_416021_416021 1.24 AT2G01910.1
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr5_+_22716917_22716917 1.24 AT5G56100.1
AT5G56100
glycine-rich protein / oleosin
arTal_v1_Chr4_-_17015099_17015155 1.24 AT4G35920.3
AT4G35920.4
AT4G35920.2
MCA1
PLAC8 family protein
arTal_v1_Chr1_+_4688018_4688018 1.24 AT1G13670.1
AT1G13670
hypothetical protein
arTal_v1_Chr4_-_10572412_10572516 1.24 AT4G19380.1
AT4G19380.2
AT4G19380
Long-chain fatty alcohol dehydrogenase family protein
arTal_v1_Chr3_-_8533834_8533834 1.24 AT3G23700.1
AT3G23700
Nucleic acid-binding proteins superfamily
arTal_v1_Chr1_-_12053935_12053935 1.24 AT1G33240.2
GTL1
GT-2-like 1
arTal_v1_Chr4_+_12006986_12007040 1.23 AT4G22890.3
AT4G22890.4
AT4G22890.5
AT4G22890.1
AT4G22890.2
PGR5-LIKE A
PGR5-LIKE A

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G45249

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 25.3 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.7 4.8 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.7 2.0 GO:0010198 synergid death(GO:0010198)
0.6 3.1 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.6 1.8 GO:0090143 nucleoid organization(GO:0090143)
0.5 10.3 GO:0006949 syncytium formation(GO:0006949)
0.5 4.9 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.5 2.6 GO:0042549 photosystem II stabilization(GO:0042549)
0.5 1.4 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.5 0.9 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.5 2.7 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 1.3 GO:0048255 mRNA stabilization(GO:0048255)
0.4 3.0 GO:0006000 fructose metabolic process(GO:0006000)
0.4 2.5 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.4 7.1 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.4 1.2 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.4 2.0 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.4 4.3 GO:0010206 photosystem II repair(GO:0010206)
0.4 2.2 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.4 4.3 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.3 1.0 GO:0010447 response to acidic pH(GO:0010447)
0.3 1.4 GO:0010480 microsporocyte differentiation(GO:0010480)
0.3 4.7 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.3 1.7 GO:0071277 cellular response to calcium ion(GO:0071277)
0.3 1.0 GO:0080051 cutin transport(GO:0080051)
0.3 0.9 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.3 1.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.3 2.1 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 4.1 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.3 3.4 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.3 1.8 GO:0071588 chloroplast-nucleus signaling pathway(GO:0010019) hydrogen peroxide mediated signaling pathway(GO:0071588)
0.2 2.5 GO:2000037 negative regulation of DNA endoreduplication(GO:0032876) regulation of stomatal complex patterning(GO:2000037)
0.2 2.7 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.2 0.7 GO:0090549 response to carbon starvation(GO:0090549)
0.2 0.7 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.2 0.7 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.2 0.9 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.2 1.3 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 0.9 GO:0009660 amyloplast organization(GO:0009660)
0.2 0.8 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 1.5 GO:0090057 root radial pattern formation(GO:0090057)
0.2 0.8 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.2 13.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 1.2 GO:1904961 quiescent center organization(GO:1904961)
0.2 3.0 GO:0030497 fatty acid elongation(GO:0030497)
0.2 1.0 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.2 0.5 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174) DNA replication preinitiation complex assembly(GO:0071163)
0.2 2.8 GO:0000919 cell plate assembly(GO:0000919)
0.2 1.3 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 0.7 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 0.8 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 3.3 GO:0005983 starch catabolic process(GO:0005983)
0.2 1.0 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 0.8 GO:0010338 leaf formation(GO:0010338)
0.2 0.8 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.2 0.5 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 0.6 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.2 20.4 GO:0015979 photosynthesis(GO:0015979)
0.2 0.8 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 4.9 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 0.9 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.7 GO:0071486 cellular response to high light intensity(GO:0071486)
0.1 0.4 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 1.5 GO:0007143 female meiotic division(GO:0007143)
0.1 0.4 GO:0042148 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.1 12.1 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.3 GO:0048533 sporocyte differentiation(GO:0048533)
0.1 0.7 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 2.0 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 1.2 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 1.1 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.4 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.2 GO:1900542 regulation of nucleotide metabolic process(GO:0006140) regulation of purine nucleotide metabolic process(GO:1900542)
0.1 0.4 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 8.6 GO:0007018 microtubule-based movement(GO:0007018)
0.1 1.0 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 2.0 GO:0009901 anther dehiscence(GO:0009901)
0.1 0.3 GO:0043467 regulation of generation of precursor metabolites and energy(GO:0043467)
0.1 3.1 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 1.2 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 0.5 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.6 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.7 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 1.5 GO:0009641 shade avoidance(GO:0009641)
0.1 3.8 GO:0009958 positive gravitropism(GO:0009958)
0.1 0.9 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.1 0.3 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 1.3 GO:0009827 plant-type cell wall modification(GO:0009827)
0.1 0.3 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 1.7 GO:0009959 negative gravitropism(GO:0009959)
0.1 1.1 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.1 1.0 GO:0007140 male meiosis(GO:0007140)
0.1 0.6 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.1 0.6 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.1 0.4 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 0.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.2 GO:0010052 guard cell differentiation(GO:0010052)
0.1 0.3 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.3 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 2.3 GO:0006284 base-excision repair(GO:0006284)
0.1 0.5 GO:0033206 meiotic cytokinesis(GO:0033206)
0.1 1.1 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.1 4.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 1.8 GO:0048598 embryonic morphogenesis(GO:0048598)
0.1 0.3 GO:0048479 style development(GO:0048479)
0.1 1.1 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.6 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.2 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 2.5 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.1 0.1 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.1 0.5 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.6 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.3 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.2 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 0.3 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.1 0.2 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 0.7 GO:0010315 auxin efflux(GO:0010315)
0.1 0.6 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 1.0 GO:0046688 response to copper ion(GO:0046688)
0.1 1.0 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 2.2 GO:0009630 gravitropism(GO:0009630)
0.1 0.5 GO:0006670 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.5 GO:0015914 phospholipid transport(GO:0015914)
0.1 0.4 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.5 GO:0006308 DNA catabolic process(GO:0006308)
0.1 0.2 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.1 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.0 1.3 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.4 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 1.0 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.9 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 1.1 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 1.3 GO:0032273 positive regulation of protein polymerization(GO:0032273) positive regulation of cytoskeleton organization(GO:0051495)
0.0 0.7 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.5 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 1.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.8 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 1.0 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.0 1.1 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.7 GO:0010363 regulation of plant-type hypersensitive response(GO:0010363)
0.0 0.6 GO:0006415 translational termination(GO:0006415)
0.0 1.2 GO:0010089 xylem development(GO:0010089)
0.0 1.2 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.2 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 0.4 GO:0001709 cell fate determination(GO:0001709)
0.0 0.6 GO:0010152 pollen maturation(GO:0010152)
0.0 0.4 GO:0009750 response to fructose(GO:0009750)
0.0 0.2 GO:0043981 histone H4-K5 acetylation(GO:0043981)
0.0 0.2 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.1 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.0 0.2 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.4 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.4 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.1 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.2 GO:0009089 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.1 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.9 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 1.9 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 1.0 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.4 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.2 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.0 0.9 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.4 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.2 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.0 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.5 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.3 GO:2000027 regulation of organ morphogenesis(GO:2000027)
0.0 0.6 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.1 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 1.4 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.4 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 0.1 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.4 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 1.3 GO:0006400 tRNA modification(GO:0006400)
0.0 0.4 GO:2000008 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.2 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.2 GO:0010274 hydrotropism(GO:0010274)
0.0 0.2 GO:0046794 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.3 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.0 0.3 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.1 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.3 GO:0030198 extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062)
0.0 1.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.7 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.0 0.3 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.1 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0 0.0 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 1.1 GO:0009411 response to UV(GO:0009411)
0.0 0.4 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.3 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.3 GO:0016556 mRNA modification(GO:0016556)
0.0 0.1 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.0 0.2 GO:0006997 nucleus organization(GO:0006997)
0.0 0.4 GO:0000911 cytokinesis by cell plate formation(GO:0000911) cytokinetic process(GO:0032506) mitotic cytokinetic process(GO:1902410)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 4.0 GO:0030093 chloroplast photosystem I(GO:0030093)
1.2 6.0 GO:0010007 magnesium chelatase complex(GO:0010007)
0.9 12.4 GO:0009522 photosystem I(GO:0009522)
0.6 2.2 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.5 2.0 GO:0009509 chromoplast(GO:0009509)
0.4 24.6 GO:0031977 thylakoid lumen(GO:0031977)
0.4 1.8 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.3 16.3 GO:0010287 plastoglobule(GO:0010287)
0.2 2.7 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.2 0.7 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.2 0.6 GO:1990298 bub1-bub3 complex(GO:1990298)
0.2 0.6 GO:0070382 exocytic vesicle(GO:0070382)
0.2 2.9 GO:0048500 signal recognition particle(GO:0048500)
0.2 1.0 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 3.5 GO:0009508 plastid chromosome(GO:0009508)
0.2 0.7 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.2 0.3 GO:0009501 amyloplast(GO:0009501)
0.2 1.2 GO:0030892 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 2.7 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 0.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 47.1 GO:0009579 thylakoid(GO:0009579)
0.1 0.7 GO:0031209 SCAR complex(GO:0031209)
0.1 2.5 GO:0009574 preprophase band(GO:0009574)
0.1 0.3 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 1.3 GO:0000124 SAGA complex(GO:0000124)
0.1 0.3 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.2 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 0.4 GO:0044545 NSL complex(GO:0044545)
0.1 0.4 GO:0035619 root hair tip(GO:0035619)
0.0 0.2 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 8.8 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.7 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.3 GO:0030897 HOPS complex(GO:0030897)
0.0 19.5 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.7 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 2.2 GO:0090406 pollen tube(GO:0090406)
0.0 0.8 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.8 GO:0005871 kinesin complex(GO:0005871)
0.0 0.6 GO:0016324 apical plasma membrane(GO:0016324)
0.0 4.1 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.2 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 2.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 4.9 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.4 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.5 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 1.2 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 2.2 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 33.1 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.3 13.9 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
1.4 5.8 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
1.0 6.0 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.8 2.5 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.8 19.9 GO:0016168 chlorophyll binding(GO:0016168)
0.7 3.0 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.7 2.2 GO:0009374 biotin binding(GO:0009374)
0.7 0.7 GO:0031409 pigment binding(GO:0031409)
0.7 3.3 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.7 2.0 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.6 4.9 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.4 2.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.4 3.4 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.4 1.3 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.4 2.6 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.4 3.7 GO:0009922 fatty acid elongase activity(GO:0009922)
0.4 2.0 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.4 1.6 GO:0016420 malonyltransferase activity(GO:0016420)
0.4 1.1 GO:0010242 oxygen evolving activity(GO:0010242)
0.4 1.1 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.3 1.7 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.3 1.0 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.3 1.0 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.3 0.9 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.3 1.9 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.3 4.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.3 1.1 GO:0004556 alpha-amylase activity(GO:0004556)
0.3 1.4 GO:0050113 inositol oxygenase activity(GO:0050113)
0.3 0.8 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.3 1.0 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.2 1.2 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 1.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 1.0 GO:0015245 fatty acid transporter activity(GO:0015245)
0.2 0.7 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 0.7 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.2 5.8 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 7.4 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.2 0.7 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 0.9 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.2 2.4 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 1.9 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.2 4.9 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.2 1.5 GO:0008083 growth factor activity(GO:0008083)
0.2 0.4 GO:0052736 beta-glucanase activity(GO:0052736)
0.2 1.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 1.8 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.2 0.9 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.5 GO:0008481 sphinganine kinase activity(GO:0008481)
0.2 1.3 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 1.1 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.2 0.9 GO:0003913 DNA photolyase activity(GO:0003913)
0.2 1.2 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.2 1.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.9 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 1.2 GO:0051183 vitamin transporter activity(GO:0051183)
0.1 0.5 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.8 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 1.9 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 1.6 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.7 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 3.5 GO:0008810 cellulase activity(GO:0008810)
0.1 9.5 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.5 GO:0008312 7S RNA binding(GO:0008312)
0.1 1.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 3.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 2.0 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.5 GO:0008061 chitin binding(GO:0008061)
0.1 1.6 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.5 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.1 1.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 3.5 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.7 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 1.3 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 1.7 GO:0034594 phosphatidylinositol trisphosphate phosphatase activity(GO:0034594)
0.1 1.8 GO:0019203 carbohydrate phosphatase activity(GO:0019203)
0.1 1.4 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 6.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 0.5 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.5 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.4 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.6 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 0.4 GO:0000150 recombinase activity(GO:0000150)
0.1 0.6 GO:0032977 membrane insertase activity(GO:0032977)
0.1 2.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.9 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 1.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.6 GO:0010011 auxin binding(GO:0010011)
0.1 4.6 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.6 GO:0017048 Rho GTPase binding(GO:0017048)
0.1 3.3 GO:0003993 acid phosphatase activity(GO:0003993)
0.1 0.6 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.9 GO:0004124 cysteine synthase activity(GO:0004124)
0.1 0.7 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.1 0.4 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.6 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 1.2 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 0.4 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.6 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.2 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.0 2.0 GO:0005262 calcium channel activity(GO:0005262)
0.0 1.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 0.2 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.9 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 1.8 GO:0043022 ribosome binding(GO:0043022)
0.0 1.1 GO:0004568 chitinase activity(GO:0004568)
0.0 0.2 GO:0070704 sterol desaturase activity(GO:0070704)
0.0 1.9 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.8 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.6 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 1.9 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.0 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.0 3.6 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.2 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.4 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.7 GO:0070063 RNA polymerase binding(GO:0070063)
0.0 0.1 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0 1.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 1.5 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 1.0 GO:0000049 tRNA binding(GO:0000049)
0.0 0.3 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.3 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.4 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.2 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 2.0 GO:0051020 GTPase binding(GO:0051020)
0.0 0.3 GO:0008097 5S rRNA binding(GO:0008097)
0.0 1.1 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.8 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0004356 glutamate-ammonia ligase activity(GO:0004356) gamma-tubulin binding(GO:0043015)
0.0 0.3 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.2 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.1 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.0 0.9 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 4.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.7 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 1.0 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.5 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.3 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.1 GO:0008948 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471) oxaloacetate decarboxylase activity(GO:0008948)
0.0 7.3 GO:0003729 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.2 GO:0070628 proteasome binding(GO:0070628)
0.0 0.1 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.0 GO:0004181 metallocarboxypeptidase activity(GO:0004181)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.8 PID AP1 PATHWAY AP-1 transcription factor network
0.2 0.7 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.5 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.2 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.0 0.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 0.5 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 1.3 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.7 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 1.0 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 2.2 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.1 0.2 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.2 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.0 0.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.4 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.0 0.0 REACTOME LIPOPROTEIN METABOLISM Genes involved in Lipoprotein metabolism