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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G49560

Z-value: 1.85

Transcription factors associated with AT1G49560

Gene Symbol Gene ID Gene Info
AT1G49560
AT1G49560 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G49560arTal_v1_Chr1_+_18342451_18342466-0.366.3e-02Click!

Activity profile of AT1G49560 motif

Sorted Z-values of AT1G49560 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_+_13391293_13391344 3.83 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
arTal_v1_Chr2_-_16950705_16950705 3.77 AT2G40610.1
EXPA8
expansin A8
arTal_v1_Chr4_+_13390754_13390754 3.57 AT4G26530.3
FBA5
Aldolase superfamily protein
arTal_v1_Chr1_-_4090857_4090857 3.31 AT1G12090.1
ELP
extensin-like protein
arTal_v1_Chr3_+_23266227_23266227 2.90 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
arTal_v1_Chr1_+_26141726_26141836 2.88 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
arTal_v1_Chr5_-_15378416_15378416 2.87 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr5_-_15378642_15378642 2.85 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr2_-_11717432_11717437 2.82 AT2G27385.3
AT2G27385.2
AT2G27385.1
AT2G27385
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_-_5966785_5966785 2.63 AT5G18020.1
SAUR20
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_11532199_11532199 2.59 AT1G32060.1
PRK
phosphoribulokinase
arTal_v1_Chr5_-_8916856_8916856 2.56 AT5G25610.1
RD22
BURP domain-containing protein
arTal_v1_Chr1_+_6409655_6409655 2.55 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
arTal_v1_Chr4_-_18098633_18098633 2.49 AT4G38770.1
PRP4
proline-rich protein 4
arTal_v1_Chr5_+_9072708_9072727 2.34 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
arTal_v1_Chr5_+_7103384_7103419 2.33 AT5G20935.1
AT5G20935.2
CRR42
DUF3148 family protein
arTal_v1_Chr3_+_2717557_2717676 2.30 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
arTal_v1_Chr5_+_25524045_25524045 2.28 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr2_+_14577083_14577083 2.27 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
arTal_v1_Chr5_+_25523827_25523827 2.27 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr1_+_10477885_10477885 2.22 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr2_+_10856271_10856372 2.20 AT2G25510.1
AT2G25510.2
AT2G25510
transmembrane protein
arTal_v1_Chr1_+_6410947_6410947 2.19 AT1G18620.5
TRM3
LONGIFOLIA protein
arTal_v1_Chr4_-_7857933_7857933 2.18 AT4G13500.1
AT4G13500
transmembrane protein
arTal_v1_Chr5_-_7738535_7738535 2.16 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
arTal_v1_Chr4_-_13398307_13398307 2.12 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
arTal_v1_Chr1_+_6410033_6410033 2.12 AT1G18620.2
TRM3
LONGIFOLIA protein
arTal_v1_Chr5_-_3183984_3184110 2.11 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr4_-_11885533_11885533 2.09 AT4G22570.2
AT4G22570.1
APT3
adenine phosphoribosyl transferase 3
arTal_v1_Chr1_-_28245453_28245581 2.08 AT1G75250.1
AT1G75250.2
RL6
RAD-like 6
arTal_v1_Chr4_-_7591259_7591259 2.07 AT4G12980.1
AT4G12980
Auxin-responsive family protein
arTal_v1_Chr1_+_19454798_19454798 2.06 AT1G52230.1
PSAH2
photosystem I subunit H2
arTal_v1_Chr4_-_15931332_15931422 2.04 AT4G33010.2
AT4G33010.1
GLDP1
glycine decarboxylase P-protein 1
arTal_v1_Chr4_+_493546_493548 2.03 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
arTal_v1_Chr1_+_24229063_24229063 2.02 AT1G65230.1
AT1G65230
transmembrane protein, putative (DUF2358)
arTal_v1_Chr2_+_15168533_15168533 2.01 AT2G36145.1
AT2G36145
hypothetical protein
arTal_v1_Chr5_-_25629615_25629708 2.01 AT5G64040.2
AT5G64040.1
PSAN
photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
arTal_v1_Chr1_+_4001113_4001295 2.01 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
arTal_v1_Chr4_-_69884_69957 2.00 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_3183484_3183484 2.00 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
arTal_v1_Chr5_-_18026077_18026077 1.98 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
arTal_v1_Chr1_-_8183570_8183650 1.97 AT1G23080.2
AT1G23080.3
AT1G23080.4
AT1G23080.1
PIN7
Auxin efflux carrier family protein
arTal_v1_Chr3_-_20341103_20341176 1.97 AT3G54890.3
AT3G54890.4
AT3G54890.2
AT3G54890.1
LHCA1
chlorophyll a-b binding protein 6
arTal_v1_Chr4_+_12220641_12220641 1.96 AT4G23400.1
PIP1%3B5
plasma membrane intrinsic protein 1;5
arTal_v1_Chr5_+_25727126_25727268 1.96 AT5G64330.1
AT5G64330.2
AT5G64330.3
NPH3
Phototropic-responsive NPH3 family protein
arTal_v1_Chr3_-_17495033_17495033 1.96 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
arTal_v1_Chr4_+_6100714_6100714 1.95 AT4G09650.1
ATPD
F-type H+-transporting ATPase subunit delta
arTal_v1_Chr1_-_28603932_28603932 1.94 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
arTal_v1_Chr2_+_266559_266630 1.93 AT2G01590.1
AT2G01590.2
CRR3
chlororespiratory reduction 3
arTal_v1_Chr3_+_9524590_9524725 1.92 AT3G26060.1
AT3G26060.2
PRXQ
Thioredoxin superfamily protein
arTal_v1_Chr1_-_4530222_4530222 1.92 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
arTal_v1_Chr5_+_24494291_24494291 1.91 AT5G60890.1
MYB34
myb domain protein 34
arTal_v1_Chr2_+_14849357_14849357 1.91 AT2G35260.1
AT2G35260
CAAX protease self-immunity protein
arTal_v1_Chr1_-_29485389_29485389 1.87 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
arTal_v1_Chr3_+_21076505_21076505 1.87 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
arTal_v1_Chr4_+_12876822_12876948 1.86 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
arTal_v1_Chr3_+_9525465_9525465 1.85 AT3G26060.3
PRXQ
Thioredoxin superfamily protein
arTal_v1_Chr1_-_6283348_6283348 1.85 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
arTal_v1_Chr4_+_6327917_6327917 1.84 AT4G10150.1
AT4G10150
RING/U-box superfamily protein
arTal_v1_Chr2_+_9259511_9259511 1.84 AT2G21650.1
MEE3
Homeodomain-like superfamily protein
arTal_v1_Chr2_-_16690182_16690182 1.83 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_-_4682309_4682382 1.82 AT1G13650.3
AT1G13650.4
AT1G13650.2
AT1G13650.1
AT1G13650
hypothetical protein
arTal_v1_Chr2_+_10667898_10667898 1.81 AT2G25080.1
GPX1
glutathione peroxidase 1
arTal_v1_Chr1_+_20101299_20101299 1.78 AT1G53840.1
PME1
pectin methylesterase 1
arTal_v1_Chr5_+_22246519_22246519 1.78 AT5G54770.1
THI1
thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
arTal_v1_Chr4_-_5932475_5932475 1.76 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr5_-_8338032_8338032 1.75 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
arTal_v1_Chr4_+_14192569_14192569 1.75 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
arTal_v1_Chr5_+_1664040_1664062 1.74 AT5G05580.2
AT5G05580.1
FAD8
fatty acid desaturase 8
arTal_v1_Chr4_-_18165740_18165740 1.73 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr5_+_2866222_2866222 1.73 AT5G09220.1
AAP2
amino acid permease 2
arTal_v1_Chr1_+_8003223_8003223 1.73 AT1G22630.1
AT1G22630
SSUH2-like protein
arTal_v1_Chr4_-_18166008_18166008 1.73 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
arTal_v1_Chr4_+_7531141_7531141 1.73 AT4G12830.1
AT4G12830
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_-_12685145_12685151 1.73 AT2G29670.2
AT2G29670.1
AT2G29670
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_21136835_21136835 1.72 AT1G56430.1
NAS4
nicotianamine synthase 4
arTal_v1_Chr3_-_20257916_20257916 1.70 AT3G54720.1
AMP1
Peptidase M28 family protein
arTal_v1_Chr2_+_18537177_18537177 1.68 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_5469594_5469594 1.68 AT3G16140.1
PSAH-1
photosystem I subunit H-1
arTal_v1_Chr1_+_21207537_21207537 1.67 AT1G56600.1
GolS2
galactinol synthase 2
arTal_v1_Chr1_-_19101265_19101265 1.67 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
arTal_v1_Chr4_-_11504739_11504739 1.66 AT4G21650.1
AT4G21650
Subtilase family protein
arTal_v1_Chr1_+_24057297_24057439 1.64 AT1G64770.1
AT1G64770.2
PnsB2
NDH-dependent cyclic electron flow 1
arTal_v1_Chr2_+_1679307_1679507 1.63 AT2G04790.10
AT2G04790.6
AT2G04790.5
AT2G04790.7
AT2G04790.9
AT2G04790.8
AT2G04790.13
AT2G04790.12
AT2G04790.11
AT2G04790.14
AT2G04790.15
AT2G04790.16
AT2G04790.4
AT2G04790.3
AT2G04790.1
AT2G04790.2
AT2G04790
PTB domain engulfment adapter
arTal_v1_Chr4_+_8883825_8883825 1.62 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
arTal_v1_Chr2_-_13020311_13020311 1.61 AT2G30570.1
PSBW
photosystem II reaction center W
arTal_v1_Chr5_-_16820195_16820195 1.61 AT5G42070.1
AT5G42070
hypothetical protein
arTal_v1_Chr2_-_18778374_18778374 1.61 AT2G45560.3
AT2G45560.2
CYP76C1
cytochrome P450, family 76, subfamily C, polypeptide 1
arTal_v1_Chr2_+_19191247_19191247 1.60 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr1_+_20713499_20713499 1.60 AT1G55480.1
ZKT
protein containing PDZ domain, a K-box domain, and a TPR region
arTal_v1_Chr1_-_59215_59215 1.59 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr3_-_21183144_21183144 1.58 AT3G57240.1
BG3
beta-1,3-glucanase 3
arTal_v1_Chr5_-_5365391_5365391 1.58 AT5G16400.1
TRXF2
thioredoxin F2
arTal_v1_Chr4_+_12006986_12007040 1.57 AT4G22890.3
AT4G22890.4
AT4G22890.5
AT4G22890.1
AT4G22890.2
PGR5-LIKE A
PGR5-LIKE A
arTal_v1_Chr3_+_11527756_11527756 1.57 AT3G29670.1
PMAT2
HXXXD-type acyl-transferase family protein
arTal_v1_Chr3_+_16945230_16945230 1.57 AT3G46130.2
AT3G46130.1
MYB48
myb domain protein 48
arTal_v1_Chr2_+_18691664_18691664 1.57 AT2G45340.1
AT2G45340
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_-_1149261_1149261 1.56 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_13624751_13624792 1.56 AT2G32010.1
AT2G32010.3
AT2G32010.2
AT2G32010.4
CVL1
CVP2 like 1
arTal_v1_Chr5_+_18530834_18530834 1.56 AT5G45680.1
FKBP13
FK506-binding protein 13
arTal_v1_Chr2_-_18778676_18778676 1.55 AT2G45560.1
CYP76C1
cytochrome P450, family 76, subfamily C, polypeptide 1
arTal_v1_Chr2_-_16603059_16603061 1.55 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr1_+_4159227_4159265 1.55 AT1G12250.1
AT1G12250.3
AT1G12250.2
AT1G12250
Pentapeptide repeat-containing protein
arTal_v1_Chr3_+_16945433_16945525 1.53 AT3G46130.3
AT3G46130.4
MYB48
myb domain protein 48
arTal_v1_Chr2_-_16391073_16391176 1.53 AT2G39250.2
AT2G39250.1
SNZ
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_3443957_3443957 1.53 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
arTal_v1_Chr1_+_24057063_24057063 1.53 AT1G64770.3
PnsB2
NDH-dependent cyclic electron flow 1
arTal_v1_Chr3_+_20016837_20016892 1.53 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
arTal_v1_Chr5_+_18430717_18430717 1.53 AT5G45490.1
AT5G45490
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_-_4647461_4647503 1.52 AT5G14410.1
AT5G14410.2
AT5G14410
hypothetical protein
arTal_v1_Chr1_+_27669152_27669152 1.52 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_+_14988437_14988480 1.52 AT2G35660.1
AT2G35660.2
AT2G35660.3
CTF2A
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr2_+_18073305_18073305 1.52 AT2G43550.1
AT2G43550
scorpion toxin-like knottin superfamily protein
arTal_v1_Chr5_+_15703078_15703078 1.52 AT5G39210.1
CRR7
chlororespiratory reduction 7
arTal_v1_Chr2_-_12277417_12277417 1.51 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr2_-_16603319_16603319 1.51 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr4_+_18296388_18296388 1.51 AT4G39350.1
CESA2
cellulose synthase A2
arTal_v1_Chr1_+_27670626_27670626 1.51 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_-_6222300_6222300 1.50 AT5G18660.1
PCB2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_+_17986384_17986384 1.50 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
arTal_v1_Chr3_-_16074929_16074929 1.50 AT3G44450.1
AT3G44450
hypothetical protein
arTal_v1_Chr1_-_3444360_3444360 1.50 AT1G10470.1
ARR4
response regulator 4
arTal_v1_Chr5_-_21767013_21767013 1.50 AT5G53580.1
PLR1
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr1_+_13026206_13026289 1.50 AT1G35420.1
AT1G35420.2
AT1G35420.3
AT1G35420
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_3031046_3031046 1.49 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_-_13797237_13797237 1.49 AT2G32500.2
AT2G32500.1
AT2G32500
Stress responsive alpha-beta barrel domain protein
arTal_v1_Chr1_+_4877506_4877506 1.49 AT1G14280.1
PKS2
phytochrome kinase substrate 2
arTal_v1_Chr1_+_19685747_19685747 1.49 AT1G52870.1
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
arTal_v1_Chr5_+_208866_208866 1.49 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
arTal_v1_Chr4_-_10188981_10188981 1.49 AT4G18440.1
AT4G18440
L-Aspartase-like family protein
arTal_v1_Chr3_+_19108990_19108990 1.48 AT3G51510.1
AT3G51510
transmembrane protein
arTal_v1_Chr1_-_4265156_4265156 1.48 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
arTal_v1_Chr5_+_7703041_7703092 1.48 AT5G23010.2
AT5G23010.1
AT5G23010.3
MAM1
methylthioalkylmalate synthase 1
arTal_v1_Chr1_+_19685545_19685545 1.48 AT1G52870.2
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
arTal_v1_Chr4_-_2352025_2352025 1.48 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
arTal_v1_Chr5_+_17798262_17798281 1.47 AT5G44190.2
AT5G44190.1
GLK2
GOLDEN2-like 2
arTal_v1_Chr4_-_12768239_12768239 1.47 AT4G24770.1
RBP31
31-kDa RNA binding protein
arTal_v1_Chr2_+_17894796_17894796 1.46 AT2G43030.1
AT2G43030
Ribosomal protein L3 family protein
arTal_v1_Chr3_+_22373013_22373013 1.46 AT3G60530.1
GATA4
GATA transcription factor 4
arTal_v1_Chr4_+_8925571_8925571 1.46 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
arTal_v1_Chr1_-_19565270_19565272 1.46 AT1G52510.2
AT1G52510.1
AT1G52510
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_-_14724587_14724587 1.45 AT4G30110.2
HMA2
heavy metal atpase 2
arTal_v1_Chr2_-_12277245_12277245 1.45 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr4_-_12769419_12769419 1.45 AT4G24770.2
RBP31
31-kDa RNA binding protein
arTal_v1_Chr5_+_7718118_7718118 1.43 AT5G23020.1
IMS2
2-isopropylmalate synthase 2
arTal_v1_Chr1_+_25374072_25374222 1.43 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
arTal_v1_Chr4_-_8454144_8454159 1.43 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
arTal_v1_Chr4_-_14725311_14725311 1.43 AT4G30110.1
HMA2
heavy metal atpase 2
arTal_v1_Chr5_+_13949228_13949228 1.42 AT5G35777.1
AT5G35777

arTal_v1_Chr5_-_25373904_25373904 1.42 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
arTal_v1_Chr1_+_5608682_5608807 1.42 AT1G16410.1
AT1G16410.2
CYP79F1
cytochrome p450 79f1
arTal_v1_Chr4_+_12086898_12086898 1.41 AT4G23060.1
IQD22
IQ-domain 22
arTal_v1_Chr5_+_15421573_15421573 1.41 AT5G38520.2
AT5G38520
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_15819489_15819489 1.41 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_589693_589693 1.41 AT3G02730.1
TRXF1
thioredoxin F-type 1
arTal_v1_Chr3_+_21948851_21948851 1.41 AT3G59410.3
GCN2
protein kinase family protein
arTal_v1_Chr5_+_24922802_24922802 1.41 AT5G62040.1
BFT
PEBP (phosphatidylethanolamine-binding protein) family protein
arTal_v1_Chr5_+_18429047_18429047 1.40 AT5G45490.2
AT5G45490
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_+_15421289_15421289 1.39 AT5G38520.1
AT5G38520
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_20048434_20048434 1.39 AT1G53700.1
WAG1
WAG 1
arTal_v1_Chr2_-_17777717_17777717 1.38 AT2G42690.1
AT2G42690
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_2189515_2189515 1.38 AT4G04410.1
AT4G04410

arTal_v1_Chr5_-_22194559_22194559 1.38 AT5G54630.1
AT5G54630
zinc finger protein-like protein
arTal_v1_Chr5_-_16434458_16434458 1.37 AT5G41050.1
AT5G41050
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_-_17893067_17893067 1.37 AT5G44410.1
AT5G44410
FAD-binding Berberine family protein
arTal_v1_Chr3_+_288741_288741 1.36 AT3G01810.2
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr2_+_11595076_11595076 1.36 AT2G27130.1
AT2G27130
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_+_288538_288538 1.34 AT3G01810.3
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr1_+_11396402_11396402 1.34 AT1G31800.1
CYP97A3
cytochrome P450, family 97, subfamily A, polypeptide 3
arTal_v1_Chr3_+_2764651_2764651 1.34 AT3G09050.1
AT3G09050
8-amino-7-oxononanoate synthase
arTal_v1_Chr1_-_5727406_5727406 1.34 AT1G16730.1
UP6
hypothetical protein
arTal_v1_Chr3_-_4008018_4008018 1.34 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_26129551_26129551 1.33 AT1G69523.1
AT1G69523
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_+_11041331_11041331 1.33 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr4_-_16384468_16384468 1.32 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_18866197_18866197 1.32 AT1G50900.1
GDC1
Ankyrin repeat family protein
arTal_v1_Chr2_-_13946790_13946790 1.32 AT2G32870.1
AT2G32870.2
AT2G32870
TRAF-like family protein
arTal_v1_Chr1_-_29716255_29716255 1.32 AT1G78995.1
AT1G78995
hypothetical protein
arTal_v1_Chr3_+_288158_288158 1.31 AT3G01810.1
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr2_-_18630779_18630779 1.31 AT2G45190.1
AFO
Plant-specific transcription factor YABBY family protein
arTal_v1_Chr5_+_26151333_26151422 1.31 AT5G65440.5
AT5G65440.4
AT5G65440.2
AT5G65440.1
AT5G65440.3
AT5G65440.7
AT5G65440.9
AT5G65440.8
AT5G65440.6
AT5G65440
transmembrane protein
arTal_v1_Chr2_+_8779667_8779735 1.30 AT2G20340.1
AT2G20340.2
AAS
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
arTal_v1_Chr3_+_734892_734892 1.30 AT3G03190.1
GSTF11
glutathione S-transferase F11
arTal_v1_Chr2_-_18630428_18630428 1.29 AT2G45190.2
AFO
Plant-specific transcription factor YABBY family protein
arTal_v1_Chr1_-_754262_754262 1.29 AT1G03130.1
PSAD-2
photosystem I subunit D-2
arTal_v1_Chr5_+_15957368_15957368 1.29 AT5G39860.1
PRE1
basic helix-loop-helix (bHLH) DNA-binding family protein
arTal_v1_Chr3_+_6876043_6876079 1.29 AT3G19800.1
AT3G19800.2
AT3G19800
E3 ubiquitin-protein ligase, putative (DUF177)
arTal_v1_Chr5_-_20779464_20779488 1.28 AT5G51110.2
AT5G51110.1
AT5G51110
Transcriptional coactivator/pterin dehydratase
arTal_v1_Chr4_-_468294_468294 1.28 AT4G01080.1
TBL26
TRICHOME BIREFRINGENCE-LIKE 26
arTal_v1_Chr5_-_689955_689955 1.28 AT5G02940.1
AT5G02940.2
AT5G02940
ion channel POLLUX-like protein, putative (DUF1012)
arTal_v1_Chr5_-_14199431_14199431 1.27 AT5G36120.1
CCB3
cofactor assembly, complex C (B6F)
arTal_v1_Chr1_-_22997613_22997709 1.27 AT1G62250.2
AT1G62250.3
AT1G62250.1
AT1G62250
orotidine 5'-phosphate decarboxylase
arTal_v1_Chr4_-_16806830_16806830 1.27 AT4G35320.1
AT4G35320
hypothetical protein
arTal_v1_Chr5_-_26845294_26845294 1.27 AT5G67280.1
RLK
receptor-like kinase
arTal_v1_Chr4_-_11785937_11785937 1.27 AT4G22290.1
AT4G22290
Ubiquitin-specific protease family C19-related protein
arTal_v1_Chr2_+_15117015_15117015 1.27 AT2G36000.2
AT2G36000.1
EMB3114
Mitochondrial transcription termination factor family protein
arTal_v1_Chr3_-_1864566_1864566 1.26 AT3G06150.1
AT3G06150
cytochrome P450 family protein
arTal_v1_Chr3_-_1643174_1643253 1.25 AT3G05640.2
AT3G05640.1
AT3G05640.3
AT3G05640
Protein phosphatase 2C family protein
arTal_v1_Chr1_+_6184717_6184742 1.25 AT1G17970.1
AT1G17970.2
AT1G17970
RING/U-box superfamily protein
arTal_v1_Chr5_-_17962276_17962276 1.24 AT5G44568.1
AT5G44568
transmembrane protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G49560

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 6.9 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.7 2.1 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.7 2.1 GO:0032990 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.7 12.0 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.6 4.0 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.6 1.7 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.5 9.8 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.5 1.5 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.5 3.0 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 1.5 GO:0042817 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.5 1.5 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.5 2.3 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.5 2.3 GO:0019419 sulfate reduction(GO:0019419)
0.4 2.2 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 8.4 GO:0006949 syncytium formation(GO:0006949)
0.4 2.2 GO:0071277 cellular response to calcium ion(GO:0071277)
0.4 2.2 GO:0042549 photosystem II stabilization(GO:0042549)
0.4 1.7 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.4 2.1 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.4 9.9 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.4 4.1 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.4 2.4 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.4 1.2 GO:0010447 response to acidic pH(GO:0010447)
0.4 2.4 GO:0009650 UV protection(GO:0009650)
0.4 1.9 GO:0010450 inflorescence meristem growth(GO:0010450)
0.4 1.1 GO:0009099 valine biosynthetic process(GO:0009099)
0.4 0.4 GO:0031114 regulation of microtubule depolymerization(GO:0031114)
0.4 1.5 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.4 1.8 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.4 2.9 GO:0043489 RNA stabilization(GO:0043489)
0.4 1.8 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.3 1.0 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.3 1.6 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.3 0.9 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.3 1.9 GO:0016045 detection of bacterium(GO:0016045)
0.3 0.9 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 1.8 GO:0051098 regulation of binding(GO:0051098)
0.3 0.9 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.3 0.9 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.3 1.5 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.3 0.9 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 1.1 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.3 1.1 GO:0015675 nickel cation transport(GO:0015675)
0.3 1.6 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.3 5.4 GO:0010207 photosystem II assembly(GO:0010207)
0.3 4.1 GO:0009098 leucine biosynthetic process(GO:0009098)
0.3 1.6 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.3 1.3 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 2.1 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 1.8 GO:0071486 cellular response to high light intensity(GO:0071486)
0.3 1.3 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.3 0.5 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.3 2.3 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.2 0.7 GO:0019695 choline metabolic process(GO:0019695)
0.2 1.2 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.2 0.7 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.2 1.5 GO:0030656 regulation of vitamin metabolic process(GO:0030656)
0.2 0.2 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.2 0.7 GO:0080051 cutin transport(GO:0080051)
0.2 0.7 GO:0010541 acropetal auxin transport(GO:0010541)
0.2 0.7 GO:0035246 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.2 1.4 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.2 0.7 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 0.7 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.2 1.6 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 1.5 GO:0046443 FAD metabolic process(GO:0046443)
0.2 1.1 GO:0032413 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 2.6 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.2 0.6 GO:0032196 transposition(GO:0032196)
0.2 1.7 GO:0010065 primary meristem tissue development(GO:0010065)
0.2 2.3 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.2 0.6 GO:1905181 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.2 0.4 GO:0051211 anisotropic cell growth(GO:0051211)
0.2 2.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.2 0.8 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 1.0 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.2 2.9 GO:0055069 zinc ion homeostasis(GO:0055069)
0.2 0.9 GO:0072718 response to cisplatin(GO:0072718)
0.2 4.3 GO:0009638 phototropism(GO:0009638)
0.2 0.6 GO:0010444 guard mother cell differentiation(GO:0010444)
0.2 10.7 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 0.9 GO:0071276 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.2 0.5 GO:0007000 nucleolus organization(GO:0007000) chromosome localization(GO:0050000)
0.2 0.5 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.2 1.0 GO:0015855 pyrimidine nucleobase transport(GO:0015855) uracil transport(GO:0015857)
0.2 1.8 GO:0009610 response to symbiotic fungus(GO:0009610)
0.2 0.8 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.2 4.0 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.2 1.1 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 0.6 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.2 0.9 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.2 1.2 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.2 0.5 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.2 2.3 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.2 0.5 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.2 0.8 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 1.5 GO:0009405 pathogenesis(GO:0009405)
0.2 0.5 GO:0030811 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.1 1.3 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.6 GO:0015739 sialic acid transport(GO:0015739)
0.1 1.2 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.1 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 3.5 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.7 GO:0007142 male meiosis II(GO:0007142)
0.1 0.6 GO:0009557 antipodal cell differentiation(GO:0009557)
0.1 0.6 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.1 0.6 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 0.3 GO:1903961 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 1.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.4 GO:0043157 response to cation stress(GO:0043157)
0.1 7.3 GO:0010114 response to red light(GO:0010114)
0.1 0.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.1 0.9 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.9 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.4 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.1 1.3 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.7 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.6 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 0.5 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 1.9 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.1 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.9 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 0.4 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.6 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.1 0.4 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 1.1 GO:0010088 phloem development(GO:0010088)
0.1 0.6 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.5 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 0.6 GO:0010338 leaf formation(GO:0010338)
0.1 1.4 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 1.4 GO:0045995 regulation of embryonic development(GO:0045995)
0.1 1.0 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.8 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 0.4 GO:0032418 lysosome localization(GO:0032418)
0.1 1.2 GO:0010098 suspensor development(GO:0010098)
0.1 1.7 GO:0071483 cellular response to blue light(GO:0071483)
0.1 0.2 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.5 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.1 1.6 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.4 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 0.7 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 2.0 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 0.3 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520) negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.1 2.6 GO:0006284 base-excision repair(GO:0006284)
0.1 1.0 GO:2001289 lipid X metabolic process(GO:2001289)
0.1 0.5 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.5 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.1 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.1 0.4 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 1.0 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 1.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.7 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.1 1.0 GO:0036065 fucosylation(GO:0036065)
0.1 0.4 GO:0019627 urea metabolic process(GO:0019627)
0.1 0.5 GO:0006013 mannose metabolic process(GO:0006013)
0.1 1.2 GO:0048564 photosystem I assembly(GO:0048564)
0.1 0.6 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 0.8 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.1 0.5 GO:0006491 N-glycan processing(GO:0006491)
0.1 0.4 GO:0006517 protein deglycosylation(GO:0006517)
0.1 2.6 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 1.5 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.5 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.4 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.5 GO:0060359 response to ammonium ion(GO:0060359)
0.1 2.4 GO:0006012 galactose metabolic process(GO:0006012)
0.1 1.7 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 2.1 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.1 0.5 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.9 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 6.1 GO:0045454 cell redox homeostasis(GO:0045454)
0.1 2.5 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 0.2 GO:0007349 cellularization(GO:0007349)
0.1 0.7 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.5 GO:0044211 CTP salvage(GO:0044211)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.1 0.5 GO:0009435 NAD biosynthetic process(GO:0009435)
0.1 0.7 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.6 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.4 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 6.0 GO:0015979 photosynthesis(GO:0015979)
0.1 2.1 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.5 GO:0046085 adenosine metabolic process(GO:0046085)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 0.6 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.5 GO:0009635 response to herbicide(GO:0009635)
0.1 0.1 GO:0009663 plasmodesma organization(GO:0009663)
0.1 0.4 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 1.1 GO:0050821 protein stabilization(GO:0050821)
0.1 2.0 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 1.3 GO:0010152 pollen maturation(GO:0010152)
0.1 0.3 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.4 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.1 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203) UDP-glucuronate metabolic process(GO:0046398)
0.1 0.3 GO:1902407 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.1 0.5 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.3 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.7 GO:0006826 iron ion transport(GO:0006826)
0.1 1.0 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.4 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 1.0 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.2 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.1 0.5 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.1 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.1 0.4 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.1 0.2 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.2 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.1 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.4 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.3 GO:0071715 icosanoid secretion(GO:0032309) acid secretion(GO:0046717) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 1.3 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.1 0.1 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.1 1.4 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 1.5 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 0.2 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 3.5 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.6 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.3 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 1.0 GO:0009269 response to desiccation(GO:0009269)
0.1 0.2 GO:0090615 mitochondrial mRNA processing(GO:0090615)
0.1 0.2 GO:0001192 maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193)
0.1 0.3 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.2 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 0.2 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.6 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 1.1 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.6 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.2 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.9 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.3 GO:0043486 histone exchange(GO:0043486)
0.0 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.1 GO:0006829 zinc II ion transport(GO:0006829)
0.0 0.5 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 3.1 GO:0048544 recognition of pollen(GO:0048544)
0.0 2.0 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 1.3 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.9 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.7 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.4 GO:0031222 arabinan catabolic process(GO:0031222)
0.0 0.7 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.5 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.3 GO:0051014 actin filament severing(GO:0051014)
0.0 0.0 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.0 0.9 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 1.1 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 1.0 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 1.1 GO:0009960 endosperm development(GO:0009960)
0.0 0.2 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 2.8 GO:0009832 plant-type cell wall biogenesis(GO:0009832)
0.0 1.1 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.0 0.4 GO:0052192 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 1.3 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 1.5 GO:1903338 regulation of cell wall organization or biogenesis(GO:1903338)
0.0 0.5 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.5 GO:0009299 mRNA transcription(GO:0009299)
0.0 1.5 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.4 GO:0048645 formation of organ boundary(GO:0010160) organ formation(GO:0048645) formation of anatomical boundary(GO:0048859)
0.0 0.2 GO:0045005 DNA-dependent DNA replication maintenance of fidelity(GO:0045005)
0.0 0.4 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.7 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.1 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.2 GO:0016572 histone phosphorylation(GO:0016572)
0.0 0.1 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 0.1 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.0 0.1 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 0.1 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.2 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.2 GO:0010587 miRNA metabolic process(GO:0010586) miRNA catabolic process(GO:0010587)
0.0 0.9 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.3 GO:0006825 copper ion transport(GO:0006825)
0.0 0.0 GO:1901654 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217) response to ketone(GO:1901654)
0.0 0.1 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.1 GO:0097298 regulation of nucleus size(GO:0097298)
0.0 0.1 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.0 0.2 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.9 GO:0048825 cotyledon development(GO:0048825)
0.0 0.6 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.3 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.7 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.0 0.8 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.4 GO:0015918 sterol transport(GO:0015918)
0.0 0.4 GO:0046451 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.0 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.0 0.2 GO:0080186 developmental vegetative growth(GO:0080186)
0.0 0.1 GO:0044839 G2/M transition of mitotic cell cycle(GO:0000086) regulation of G2/M transition of mitotic cell cycle(GO:0010389) cell cycle G2/M phase transition(GO:0044839) regulation of cell cycle G2/M phase transition(GO:1902749)
0.0 0.5 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.2 GO:0010358 leaf shaping(GO:0010358)
0.0 0.4 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.5 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.3 GO:0006450 regulation of translational fidelity(GO:0006450)
0.0 0.5 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 2.9 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.3 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.3 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:0006915 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.0 0.2 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.0 0.5 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:0009668 plastid membrane organization(GO:0009668)
0.0 0.1 GO:0009584 detection of visible light(GO:0009584)
0.0 0.1 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.0 0.2 GO:0009641 shade avoidance(GO:0009641)
0.0 0.0 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.0 0.3 GO:0050826 response to freezing(GO:0050826)
0.0 0.3 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.4 GO:0006301 postreplication repair(GO:0006301)
0.0 0.4 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.0 0.0 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.1 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.6 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.4 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.2 GO:1902074 response to salt(GO:1902074)
0.0 0.2 GO:0007135 meiosis II(GO:0007135) meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.0 0.6 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.1 GO:0048200 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 0.2 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.1 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.6 GO:0006813 potassium ion transport(GO:0006813)
0.0 0.2 GO:1901989 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of chromosome segregation(GO:0051984) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of cell cycle phase transition(GO:1901989) positive regulation of mitotic cell cycle phase transition(GO:1901992) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.1 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 0.1 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.4 GO:0010022 meristem determinacy(GO:0010022)
0.0 0.0 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.0 0.0 GO:0022898 regulation of transmembrane transporter activity(GO:0022898) regulation of ion transmembrane transporter activity(GO:0032412)
0.0 0.4 GO:0010025 wax biosynthetic process(GO:0010025)
0.0 0.6 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.1 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.0 0.3 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.4 GO:0006306 DNA alkylation(GO:0006305) DNA methylation(GO:0006306)
0.0 0.3 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.7 GO:0006887 exocytosis(GO:0006887)
0.0 0.7 GO:0048440 carpel development(GO:0048440)
0.0 0.1 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.2 GO:0045860 positive regulation of protein kinase activity(GO:0045860)
0.0 0.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 1.2 GO:0071555 cell wall organization(GO:0071555)
0.0 0.1 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0030093 chloroplast photosystem I(GO:0030093)
0.6 5.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.6 5.0 GO:0009538 photosystem I reaction center(GO:0009538)
0.5 8.4 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.4 2.0 GO:0005960 glycine cleavage complex(GO:0005960)
0.4 1.6 GO:0009509 chromoplast(GO:0009509)
0.4 1.4 GO:0032807 DNA ligase IV complex(GO:0032807)
0.3 20.0 GO:0010287 plastoglobule(GO:0010287)
0.2 0.7 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.2 1.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 0.8 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.2 7.1 GO:0010319 stromule(GO:0010319)
0.2 0.7 GO:0032155 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.2 0.7 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.2 0.7 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 57.5 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 1.5 GO:0042555 MCM complex(GO:0042555)
0.1 10.3 GO:0009579 thylakoid(GO:0009579)
0.1 0.8 GO:0031209 SCAR complex(GO:0031209)
0.1 2.3 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.7 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 0.5 GO:1990752 microtubule end(GO:1990752)
0.1 0.5 GO:0032044 DSIF complex(GO:0032044)
0.1 0.7 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.1 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.3 GO:0000812 Swr1 complex(GO:0000812)
0.1 1.0 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.6 GO:0090397 stigma papilla(GO:0090397)
0.1 0.6 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.4 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.1 1.0 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.1 GO:0012510 trans-Golgi network transport vesicle membrane(GO:0012510)
0.1 2.1 GO:0016324 apical plasma membrane(GO:0016324)
0.1 1.2 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.6 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.1 0.8 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.1 0.3 GO:0030141 secretory granule(GO:0030141)
0.1 0.3 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 2.3 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 0.7 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.2 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 0.2 GO:0000814 ESCRT II complex(GO:0000814)
0.1 0.2 GO:0005652 nuclear lamina(GO:0005652)
0.1 0.8 GO:0005720 nuclear heterochromatin(GO:0005720)
0.1 0.4 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.1 0.9 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.1 0.3 GO:0000795 synaptonemal complex(GO:0000795)
0.1 1.0 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.1 0.2 GO:0097361 CIA complex(GO:0097361)
0.0 0.7 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 1.1 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.2 GO:0051233 chromosome passenger complex(GO:0032133) spindle midzone(GO:0051233)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 6.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.9 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.3 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.4 GO:0045298 tubulin complex(GO:0045298)
0.0 18.4 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.5 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 3.6 GO:0031226 intrinsic component of plasma membrane(GO:0031226)
0.0 0.9 GO:0005871 kinesin complex(GO:0005871)
0.0 0.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 3.1 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.7 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.6 GO:0031358 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.0 5.1 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.2 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.1 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.0 5.0 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.0 GO:0000777 condensed chromosome kinetochore(GO:0000777)
0.0 0.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.1 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.2 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.7 GO:0005874 microtubule(GO:0005874)
0.0 0.7 GO:0031201 SNARE complex(GO:0031201)
0.0 2.5 GO:0048046 apoplast(GO:0048046)
0.0 0.1 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.2 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.1 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 44.3 GO:0009507 chloroplast(GO:0009507)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 5.7 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.9 3.6 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.8 3.4 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.8 10.5 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.7 6.5 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.7 2.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.7 2.1 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.7 2.0 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.6 3.5 GO:0030594 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.6 2.3 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.6 2.8 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.5 1.6 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.5 1.5 GO:0016842 amidine-lyase activity(GO:0016842)
0.5 2.0 GO:0070402 NADPH binding(GO:0070402)
0.4 1.3 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.4 1.3 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.4 1.7 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.4 11.1 GO:0016168 chlorophyll binding(GO:0016168)
0.4 1.7 GO:0015929 hexosaminidase activity(GO:0015929)
0.4 1.2 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.4 1.5 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.4 1.5 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.4 1.1 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.4 3.6 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.3 2.0 GO:0019904 protein domain specific binding(GO:0019904)
0.3 1.0 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.3 2.7 GO:0019137 thioglucosidase activity(GO:0019137)
0.3 1.0 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.3 1.9 GO:0051723 protein methylesterase activity(GO:0051723)
0.3 1.9 GO:0045431 flavonol synthase activity(GO:0045431)
0.3 0.9 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.3 0.9 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.3 2.7 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.3 3.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.3 1.4 GO:0035197 siRNA binding(GO:0035197)
0.3 2.0 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 0.9 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.3 0.9 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.3 2.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.3 1.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.3 1.4 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.3 5.9 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.3 3.6 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.3 2.0 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 2.0 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 0.7 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.2 0.7 GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.2 0.7 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.2 1.4 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.2 0.9 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.2 1.2 GO:0008430 selenium binding(GO:0008430)
0.2 0.9 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.2 2.0 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.2 1.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 1.5 GO:0017080 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.2 1.7 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.2 2.2 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 1.6 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.6 GO:0047912 galacturonokinase activity(GO:0047912)
0.2 1.6 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.2 1.0 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.2 0.6 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.2 0.8 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.2 0.6 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.2 0.9 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 0.9 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.2 1.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.2 3.3 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.2 0.5 GO:0010242 oxygen evolving activity(GO:0010242)
0.2 3.0 GO:0008146 sulfotransferase activity(GO:0008146)
0.2 0.5 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.2 0.7 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.2 0.2 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.2 0.5 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 0.8 GO:0070492 oligosaccharide binding(GO:0070492)
0.2 0.5 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.2 2.1 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.2 0.5 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.2 3.2 GO:0005199 structural constituent of cell wall(GO:0005199)
0.2 0.6 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.2 1.3 GO:0030151 molybdenum ion binding(GO:0030151)
0.2 0.6 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 0.4 GO:0004359 glutaminase activity(GO:0004359)
0.1 0.4 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.1 0.6 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.7 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.1 0.9 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.7 GO:0004765 shikimate kinase activity(GO:0004765)
0.1 2.9 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 1.1 GO:0010011 auxin binding(GO:0010011)
0.1 2.7 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 0.7 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 1.1 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.4 GO:0004645 phosphorylase activity(GO:0004645)
0.1 0.4 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 1.0 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.1 0.5 GO:0047493 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.4 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 0.9 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.4 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.4 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.1 0.7 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 3.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.6 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.6 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.7 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 0.5 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.7 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 1.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 2.0 GO:0004033 aldo-keto reductase (NADP) activity(GO:0004033) alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 1.4 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.6 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 1.0 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 1.2 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 0.6 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.7 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.4 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.1 0.4 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.3 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.1 1.5 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 0.6 GO:0004310 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.1 0.1 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 0.4 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1 0.9 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.4 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.1 0.7 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.9 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.1 1.0 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 2.0 GO:0034061 DNA polymerase activity(GO:0034061)
0.1 1.0 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 4.2 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.5 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.9 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 3.0 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 1.3 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.3 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 1.1 GO:0005402 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.1 0.6 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 1.3 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.3 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475) mannose-phosphate guanylyltransferase activity(GO:0008905)
0.1 1.5 GO:0015248 sterol transporter activity(GO:0015248)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.5 GO:0004849 uridine kinase activity(GO:0004849)
0.1 4.4 GO:0070008 serine-type exopeptidase activity(GO:0070008)
0.1 0.5 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.4 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 1.1 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.4 GO:0004594 pantothenate kinase activity(GO:0004594)
0.1 2.0 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.3 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 0.5 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.3 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.3 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.4 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.1 0.6 GO:0035198 miRNA binding(GO:0035198)
0.1 0.8 GO:0005496 steroid binding(GO:0005496)
0.1 0.2 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.6 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.5 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.9 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 1.0 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 1.1 GO:0030145 manganese ion binding(GO:0030145)
0.1 0.8 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 4.1 GO:0003777 microtubule motor activity(GO:0003777)
0.1 0.6 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 3.2 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 1.8 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.7 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.4 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 1.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 0.5 GO:0004180 carboxypeptidase activity(GO:0004180)
0.1 2.5 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.5 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 0.4 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 0.5 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.7 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 0.3 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.1 0.2 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.1 0.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 1.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 1.2 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 2.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 1.2 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.2 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.1 0.2 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 0.1 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.1 0.3 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 2.2 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 0.4 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.1 1.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.5 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.3 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.5 GO:0051747 DNA demethylase activity(GO:0035514) cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.3 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.0 2.1 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.3 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.2 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.0 0.2 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.4 GO:0001159 core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)
0.0 2.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 1.5 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.1 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 1.3 GO:0022843 voltage-gated cation channel activity(GO:0022843)
0.0 0.1 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 0.2 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 5.5 GO:0030246 carbohydrate binding(GO:0030246)
0.0 1.1 GO:0051087 chaperone binding(GO:0051087)
0.0 0.2 GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.0 0.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.5 GO:0015037 peptide disulfide oxidoreductase activity(GO:0015037) glutathione disulfide oxidoreductase activity(GO:0015038)
0.0 6.3 GO:0043531 ADP binding(GO:0043531)
0.0 1.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.0 0.6 GO:0070628 proteasome binding(GO:0070628)
0.0 0.9 GO:0009975 cyclase activity(GO:0009975)
0.0 0.4 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.3 GO:0033613 activating transcription factor binding(GO:0033613)
0.0 0.8 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.3 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.7 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.7 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.3 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.0 0.3 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.0 1.1 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.1 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.0 0.1 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 0.3 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 1.8 GO:0043621 protein self-association(GO:0043621)
0.0 0.3 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.0 2.9 GO:0008168 methyltransferase activity(GO:0008168)
0.0 3.0 GO:0016209 antioxidant activity(GO:0016209)
0.0 0.3 GO:0008061 chitin binding(GO:0008061)
0.0 0.3 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.4 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.0 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.0 0.2 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.4 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 6.1 GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012)
0.0 0.2 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.1 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 0.2 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 5.8 GO:0005506 iron ion binding(GO:0005506)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.0 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.5 GO:0000049 tRNA binding(GO:0000049)
0.0 0.1 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.2 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.2 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.2 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.0 GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity(GO:0051748)
0.0 0.6 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.2 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.0 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0003917 DNA topoisomerase type I activity(GO:0003917)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.2 1.0 PID MYC PATHWAY C-MYC pathway
0.2 1.5 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.2 1.6 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.2 1.5 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.2 1.1 PID MET PATHWAY Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)
0.2 0.6 PID REELIN PATHWAY Reelin signaling pathway
0.2 0.5 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.1 0.9 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.4 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.5 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.8 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.6 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.3 PID ATR PATHWAY ATR signaling pathway
0.1 0.2 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.1 0.3 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.1 0.2 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.2 PID ATM PATHWAY ATM pathway
0.0 0.3 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 PID E2F PATHWAY E2F transcription factor network
0.0 0.0 PID FCER1 PATHWAY Fc-epsilon receptor I signaling in mast cells

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.8 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.3 1.0 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.2 1.0 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 0.7 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.2 0.5 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.1 0.7 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.4 REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS Genes involved in p130Cas linkage to MAPK signaling for integrins
0.1 0.4 REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS Genes involved in Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
0.1 0.3 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.7 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.3 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 0.5 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.3 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.1 0.2 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.1 0.6 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.1 0.6 REACTOME POST TRANSLATIONAL PROTEIN MODIFICATION Genes involved in Post-translational protein modification
0.1 0.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.2 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 0.5 REACTOME TELOMERE MAINTENANCE Genes involved in Telomere Maintenance
0.0 0.2 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.0 0.4 REACTOME DNA REPAIR Genes involved in DNA Repair
0.0 0.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.1 REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS Genes involved in Activation of ATR in response to replication stress
0.0 0.0 REACTOME SPHINGOLIPID METABOLISM Genes involved in Sphingolipid metabolism