Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT1G54060

Z-value: 0.24

Transcription factors associated with AT1G54060

Gene Symbol Gene ID Gene Info
AT1G54060
AT1G54060 6B-interacting protein 1-like 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ASIL1arTal_v1_Chr1_+_20180610_20180610-0.842.3e-08Click!

Activity profile of AT1G54060 motif

Sorted Z-values of AT1G54060 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_10316886_10316886 0.77 AT4G18780.1
IRX1
cellulose synthase family protein
arTal_v1_Chr3_+_6744377_6744377 0.63 AT3G19450.1
ATCAD4
GroES-like zinc-binding alcohol dehydrogenase family protein
arTal_v1_Chr5_-_19838235_19838235 0.57 AT5G48930.1
HCT
hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
arTal_v1_Chr2_-_15589369_15589369 0.43 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_5084524_5084695 0.41 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr4_+_16310409_16310409 0.27 AT4G34050.3
CCoAOMT1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_16310768_16310815 0.27 AT4G34050.1
AT4G34050.2
CCoAOMT1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_9531489_9531489 0.17 AT1G27440.1
GUT2
Exostosin family protein
arTal_v1_Chr5_-_4065075_4065075 0.03 AT5G12870.1
MYB46
myb domain protein 46

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G54060

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.2 0.5 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.0 0.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.6 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
0.0 0.4 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.6 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.5 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.0 0.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.8 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)