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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G55110

Z-value: 1.31

Transcription factors associated with AT1G55110

Gene Symbol Gene ID Gene Info
AT1G55110
AT1G55110 indeterminate(ID)-domain 7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
IDD7arTal_v1_Chr1_-_20563269_20563269-0.925.0e-12Click!

Activity profile of AT1G55110 motif

Sorted Z-values of AT1G55110 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_16950705_16950705 5.37 AT2G40610.1
EXPA8
expansin A8
arTal_v1_Chr1_-_29635931_29635931 4.91 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
arTal_v1_Chr4_-_10391298_10391298 4.00 AT4G18970.1
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_-_10390991_10390991 3.96 AT4G18970.2
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_+_2763449_2763513 3.95 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
arTal_v1_Chr1_-_59215_59215 3.73 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr3_-_16448844_16448844 3.63 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
arTal_v1_Chr4_-_12400231_12400231 3.56 AT4G23820.1
AT4G23820
Pectin lyase-like superfamily protein
arTal_v1_Chr1_+_20614573_20614610 3.44 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_14562863_14562863 3.41 AT5G36910.1
THI2.2
thionin 2.2
arTal_v1_Chr1_-_6999839_6999839 3.35 AT1G20190.1
EXPA11
expansin 11
arTal_v1_Chr3_-_9492655_9492655 3.29 AT3G25920.1
RPL15
ribosomal protein L15
arTal_v1_Chr2_-_15474717_15474828 3.23 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
arTal_v1_Chr1_-_6999523_6999523 3.10 AT1G20190.2
EXPA11
expansin 11
arTal_v1_Chr5_-_18026077_18026077 3.08 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
arTal_v1_Chr3_+_251868_251868 3.08 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
arTal_v1_Chr5_+_1664040_1664062 3.05 AT5G05580.2
AT5G05580.1
FAD8
fatty acid desaturase 8
arTal_v1_Chr2_+_1676999_1676999 3.03 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
arTal_v1_Chr1_+_26141726_26141836 2.95 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
arTal_v1_Chr2_+_1676717_1676717 2.95 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
arTal_v1_Chr2_-_15137012_15137012 2.95 AT2G36050.1
OFP15
ovate family protein 15
arTal_v1_Chr3_-_4744263_4744263 2.94 AT3G14240.1
AT3G14240
Subtilase family protein
arTal_v1_Chr4_+_620691_620697 2.93 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_15401640_15401640 2.92 AT4G31840.1
ENODL15
early nodulin-like protein 15
arTal_v1_Chr4_+_16397995_16397995 2.91 AT4G34260.1
FUC95A
1,2-alpha-L-fucosidase
arTal_v1_Chr1_+_9067039_9067039 2.90 AT1G26210.1
SOFL1
SOB five-like 1
arTal_v1_Chr5_+_3889906_3889906 2.86 AT5G12050.1
AT5G12050
rho GTPase-activating protein
arTal_v1_Chr5_+_152446_152446 2.86 AT5G01370.1
ACI1
ALC-interacting protein 1
arTal_v1_Chr3_-_6882235_6882315 2.84 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
arTal_v1_Chr4_-_18370698_18370698 2.81 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
arTal_v1_Chr4_-_69884_69957 2.74 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_7026533_7026533 2.71 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr4_+_9556783_9556783 2.71 AT4G16980.1
AT4G16980
arabinogalactan-protein family
arTal_v1_Chr5_-_8707885_8707885 2.68 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_16468327_16468344 2.66 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
arTal_v1_Chr1_+_19454798_19454798 2.65 AT1G52230.1
PSAH2
photosystem I subunit H2
arTal_v1_Chr3_-_20142763_20142763 2.62 AT3G54400.1
AT3G54400
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_7026753_7026753 2.57 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_6319427_6319427 2.57 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_23911024_23911024 2.56 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr3_+_8586359_8586359 2.55 AT3G23805.1
RALFL24
ralf-like 24
arTal_v1_Chr3_+_3698658_3698658 2.55 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
arTal_v1_Chr5_-_20712386_20712473 2.54 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_-_17355891_17356037 2.52 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
arTal_v1_Chr3_-_17337733_17337733 2.51 AT3G47070.1
AT3G47070
thylakoid soluble phosphoprotein
arTal_v1_Chr5_+_18945543_18945543 2.51 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
arTal_v1_Chr1_+_4868346_4868346 2.49 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
arTal_v1_Chr1_-_26515188_26515255 2.49 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
arTal_v1_Chr2_+_19191247_19191247 2.47 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
arTal_v1_Chr4_-_7353117_7353135 2.46 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
arTal_v1_Chr2_-_19617681_19617681 2.44 AT2G47930.1
AGP26
arabinogalactan protein 26
arTal_v1_Chr2_+_13647699_13647699 2.44 AT2G32100.1
OFP16
ovate family protein 16
arTal_v1_Chr1_+_3530353_3530451 2.43 AT1G10657.4
AT1G10657.2
AT1G10657.3
AT1G10657.1
AT1G10657
transmembrane protein
arTal_v1_Chr4_-_18067873_18067873 2.42 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr4_-_17181261_17181261 2.41 AT4G36360.2
BGAL3
beta-galactosidase 3
arTal_v1_Chr1_+_11343854_11343854 2.40 AT1G31690.1
AT1G31690
Copper amine oxidase family protein
arTal_v1_Chr4_+_493546_493548 2.39 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
arTal_v1_Chr4_-_17181466_17181466 2.39 AT4G36360.1
BGAL3
beta-galactosidase 3
arTal_v1_Chr4_-_18068293_18068293 2.39 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr2_+_18626188_18626188 2.37 AT2G45180.1
AT2G45180
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_+_15819489_15819489 2.35 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_9620533_9620588 2.35 AT5G27290.2
AT5G27290.1
AT5G27290
stress regulated protein
arTal_v1_Chr1_+_9259750_9259750 2.32 AT1G26770.2
EXPA10
expansin A10
arTal_v1_Chr5_+_1952505_1952505 2.31 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
arTal_v1_Chr5_-_19899301_19899301 2.30 AT5G49100.1
AT5G49100
vitellogenin-like protein
arTal_v1_Chr1_-_30041952_30041952 2.29 AT1G79850.1
RPS17
ribosomal protein S17
arTal_v1_Chr4_-_15429113_15429225 2.28 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
arTal_v1_Chr3_-_8623214_8623214 2.27 AT3G23880.1
AT3G23880
F-box and associated interaction domains-containing protein
arTal_v1_Chr1_+_7696427_7696427 2.26 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_30113489_30113489 2.25 AT1G80050.2
APT2
adenine phosphoribosyl transferase 2
arTal_v1_Chr3_-_18628888_18628914 2.25 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
arTal_v1_Chr3_+_6266946_6267045 2.25 AT3G18280.2
AT3G18280.1
AT3G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_10477885_10477885 2.24 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr4_+_16357421_16357421 2.23 AT4G34160.1
CYCD3%3B1
CYCLIN D3;1
arTal_v1_Chr1_+_9259432_9259432 2.22 AT1G26770.1
EXPA10
expansin A10
arTal_v1_Chr2_+_1033598_1033598 2.21 AT2G03410.1
AT2G03410
Mo25 family protein
arTal_v1_Chr5_-_23406479_23406479 2.21 AT5G57780.1
P1R1
transcription factor
arTal_v1_Chr5_-_26501955_26501955 2.19 AT5G66330.1
AT5G66330
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_29117500_29117542 2.18 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
arTal_v1_Chr3_+_19417372_19417401 2.18 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
arTal_v1_Chr2_-_12785037_12785037 2.15 AT2G29980.2
FAD3
fatty acid desaturase 3
arTal_v1_Chr4_+_14677661_14677695 2.15 AT4G30020.2
AT4G30020.3
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr3_-_3277930_3277930 2.14 AT3G10520.1
HB2
hemoglobin 2
arTal_v1_Chr3_+_19613078_19613078 2.13 AT3G52900.1
AT3G52900
RAB6-interacting golgin (DUF662)
arTal_v1_Chr2_-_12785190_12785190 2.13 AT2G29980.1
FAD3
fatty acid desaturase 3
arTal_v1_Chr1_-_21266368_21266469 2.12 AT1G56720.2
AT1G56720.4
AT1G56720
Protein kinase superfamily protein
arTal_v1_Chr1_-_30114010_30114010 2.11 AT1G80050.1
APT2
adenine phosphoribosyl transferase 2
arTal_v1_Chr4_+_12876822_12876948 2.10 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
arTal_v1_Chr4_+_11907355_11907355 2.10 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_+_10651744_10651744 2.09 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr1_+_1136078_1136078 2.08 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
arTal_v1_Chr3_-_6980523_6980523 2.08 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_2182538_2182538 2.08 AT5G07020.1
AT5G07020
proline-rich family protein
arTal_v1_Chr4_-_14439723_14439769 2.07 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
arTal_v1_Chr5_-_7047446_7047446 2.07 AT5G20820.1
AT5G20820
SAUR-like auxin-responsive protein family
arTal_v1_Chr2_+_15934244_15934244 2.06 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
arTal_v1_Chr3_+_19713799_19713799 2.05 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
arTal_v1_Chr3_+_957112_957123 2.04 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
arTal_v1_Chr3_+_8194606_8194711 2.04 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
arTal_v1_Chr2_-_18443405_18443405 2.03 AT2G44740.1
CYCP4%3B1
cyclin p4;1
arTal_v1_Chr1_-_1307973_1307973 2.03 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
arTal_v1_Chr1_+_20101299_20101299 2.02 AT1G53840.1
PME1
pectin methylesterase 1
arTal_v1_Chr3_+_956862_956862 2.02 AT3G03780.2
MS2
methionine synthase 2
arTal_v1_Chr2_+_12805667_12805714 2.02 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
arTal_v1_Chr3_-_23165387_23165387 2.02 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
arTal_v1_Chr5_+_7778017_7778095 2.00 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
arTal_v1_Chr1_-_1169034_1169034 2.00 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
arTal_v1_Chr4_-_846792_846814 1.97 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
arTal_v1_Chr3_-_18559326_18559326 1.97 AT3G50060.1
MYB77
myb domain protein 77
arTal_v1_Chr1_+_3031046_3031046 1.97 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_-_5115497_5115514 1.95 AT1G14840.2
AT1G14840.1
MAP70-4
microtubule-associated proteins 70-4
arTal_v1_Chr1_-_21717380_21717380 1.94 AT1G58440.1
XF1
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr2_-_17161293_17161294 1.94 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
arTal_v1_Chr4_+_14678096_14678096 1.94 AT4G30020.4
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr3_-_2168960_2168960 1.93 AT3G06870.1
AT3G06870
proline-rich family protein
arTal_v1_Chr4_-_2352025_2352025 1.92 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
arTal_v1_Chr1_-_8235019_8235019 1.92 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_-_1855063_1855197 1.90 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr3_+_10505711_10505711 1.88 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
arTal_v1_Chr3_-_7592373_7592373 1.88 AT3G21550.1
DMP2
transmembrane protein, putative (DUF679 domain membrane protein 2)
arTal_v1_Chr4_+_12376122_12376194 1.87 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
arTal_v1_Chr1_-_24974791_24974946 1.87 AT1G66940.2
AT1G66940.4
AT1G66940.1
AT1G66940.3
AT1G66940
kinase-like protein
arTal_v1_Chr1_+_5514262_5514262 1.87 AT1G16080.1
AT1G16080
nuclear protein
arTal_v1_Chr4_-_1026179_1026179 1.86 AT4G02320.1
AT4G02320
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr2_-_12277417_12277417 1.86 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr3_+_288741_288741 1.85 AT3G01810.2
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr3_+_288538_288538 1.84 AT3G01810.3
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr4_+_14677141_14677141 1.83 AT4G30020.1
AT4G30020
PA-domain containing subtilase family protein
arTal_v1_Chr4_+_9906821_9906840 1.83 AT4G17810.1
AT4G17810.2
AT4G17810
C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr1_-_3047893_3048006 1.83 AT1G09440.1
AT1G09440.2
AT1G09440
Protein kinase superfamily protein
arTal_v1_Chr5_-_20940895_20940895 1.83 AT5G51550.1
EXL3
EXORDIUM like 3
arTal_v1_Chr1_-_11539896_11539896 1.83 AT1G32080.1
LrgB
membrane protein
arTal_v1_Chr3_-_6855513_6855590 1.82 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_+_22337791_22337791 1.82 AT3G60440.1
AT3G60440.2
AT3G60440
Phosphoglycerate mutase family protein
arTal_v1_Chr2_-_12277245_12277245 1.82 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr3_+_288158_288158 1.82 AT3G01810.1
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr3_+_1727151_1727151 1.81 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
arTal_v1_Chr5_+_20900859_20900860 1.81 AT5G51460.1
AT5G51460.4
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr1_-_21265895_21265895 1.81 AT1G56720.1
AT1G56720
Protein kinase superfamily protein
arTal_v1_Chr2_+_17527167_17527167 1.81 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
arTal_v1_Chr1_-_1768837_1768837 1.79 AT1G05850.2
AT1G05850.1
POM1
Chitinase family protein
arTal_v1_Chr3_-_19022647_19022647 1.79 AT3G51220.1
AT3G51220
WEB family protein (DUF827)
arTal_v1_Chr5_+_8042853_8042876 1.78 AT5G23860.1
AT5G23860.2
TUB8
tubulin beta 8
arTal_v1_Chr5_+_26572265_26572265 1.78 AT5G66580.1
AT5G66580
hypothetical protein
arTal_v1_Chr1_-_29647691_29647691 1.78 AT1G78860.1
AT1G78860
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
arTal_v1_Chr3_+_20344785_20344785 1.78 AT3G54920.1
PMR6
Pectin lyase-like superfamily protein
arTal_v1_Chr4_+_5839599_5839647 1.78 AT4G09160.1
AT4G09160.2
AT4G09160.3
AT4G09160
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
arTal_v1_Chr5_+_23374873_23374874 1.77 AT5G57700.3
AT5G57700.2
AT5G57700.1
AT5G57700.5
AT5G57700
BNR/Asp-box repeat family protein
arTal_v1_Chr5_+_463073_463073 1.77 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr1_-_21266084_21266084 1.77 AT1G56720.3
AT1G56720
Protein kinase superfamily protein
arTal_v1_Chr5_-_26845294_26845294 1.76 AT5G67280.1
RLK
receptor-like kinase
arTal_v1_Chr1_+_568558_568558 1.76 AT1G02650.2
AT1G02650.1
AT1G02650
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_19002564_19002564 1.76 AT5G46830.1
NIG1
calcium-binding transcription factor NIG1
arTal_v1_Chr4_-_18510555_18510555 1.76 AT4G39900.1
AT4G39900
adenine deaminase
arTal_v1_Chr4_-_8016582_8016582 1.75 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
arTal_v1_Chr3_+_22745514_22745514 1.75 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
arTal_v1_Chr2_-_9073233_9073329 1.74 AT2G21170.2
AT2G21170.1
TIM
triosephosphate isomerase
arTal_v1_Chr1_+_29416837_29416837 1.74 AT1G78180.1
AT1G78180
Mitochondrial substrate carrier family protein
arTal_v1_Chr4_+_10949573_10949573 1.74 AT4G20270.1
BAM3
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_-_8525238_8525238 1.73 AT2G19780.1
AT2G19780
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_+_18537239_18537239 1.73 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_+_20902087_20902087 1.73 AT5G51460.2
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr2_-_9074470_9074470 1.72 AT2G21170.3
TIM
triosephosphate isomerase
arTal_v1_Chr1_+_26400694_26400790 1.69 AT1G70090.1
AT1G70090.2
LGT8
glucosyl transferase family 8
arTal_v1_Chr2_-_12355480_12355570 1.69 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr2_+_17513008_17513008 1.68 AT2G41950.1
AT2G41950
DNA-directed RNA polymerase subunit beta
arTal_v1_Chr5_+_20901835_20901835 1.68 AT5G51460.5
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_22515458_22515458 1.67 AT5G55570.2
AT5G55570.1
AT5G55570
transmembrane protein
arTal_v1_Chr4_-_8454144_8454159 1.67 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
arTal_v1_Chr5_-_22988092_22988110 1.66 AT5G56850.3
AT5G56850.1
AT5G56850.2
AT5G56850.4
AT5G56850
hypothetical protein
arTal_v1_Chr2_-_444324_444324 1.66 AT2G01950.1
BRL2
BRI1-like 2
arTal_v1_Chr2_-_425810_425810 1.66 AT2G01918.1
PQL3
PsbQ-like 3
arTal_v1_Chr5_+_20901537_20901537 1.65 AT5G51460.3
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr3_+_18514266_18514266 1.65 AT3G49940.1
LBD38
LOB domain-containing protein 38
arTal_v1_Chr1_+_16467298_16467298 1.65 AT1G43670.1
FBP
Inositol monophosphatase family protein
arTal_v1_Chr2_-_14322082_14322082 1.64 AT2G33850.1
AT2G33850
E6-like protein
arTal_v1_Chr5_-_25081141_25081141 1.64 AT5G62470.2
MYB96
myb domain protein 96
arTal_v1_Chr1_-_4492587_4492667 1.63 AT1G13170.2
AT1G13170.1
ORP1D
OSBP(oxysterol binding protein)-related protein 1D
arTal_v1_Chr4_+_17739514_17739514 1.63 AT4G37750.1
ANT
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_4247218_4247249 1.63 AT1G12460.1
AT1G12460.2
AT1G12460
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_7168106_7168106 1.62 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
arTal_v1_Chr5_+_24940203_24940396 1.62 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BAG2
BCL-2-associated athanogene 2
arTal_v1_Chr4_+_7336330_7336330 1.62 AT4G12390.1
PME1
pectin methylesterase inhibitor 1
arTal_v1_Chr4_-_17835017_17835017 1.60 AT4G37930.1
SHM1
serine transhydroxymethyltransferase 1
arTal_v1_Chr5_+_26061165_26061165 1.60 AT5G65220.1
AT5G65220
Ribosomal L29 family protein
arTal_v1_Chr4_+_8883825_8883825 1.60 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
arTal_v1_Chr1_-_6487153_6487153 1.59 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
arTal_v1_Chr1_+_23730106_23730106 1.59 AT1G63940.4
AT1G63940.3
MDAR6
monodehydroascorbate reductase 6
arTal_v1_Chr5_+_2657054_2657054 1.59 AT5G08260.1
scpl35
serine carboxypeptidase-like 35
arTal_v1_Chr4_+_17524461_17524461 1.58 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
arTal_v1_Chr5_+_26281642_26281711 1.58 AT5G65700.1
AT5G65700.2
BAM1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr4_+_455768_455768 1.58 AT4G01050.1
TROL
thylakoid rhodanese-like protein
arTal_v1_Chr4_+_455583_455583 1.58 AT4G01050.2
TROL
thylakoid rhodanese-like protein
arTal_v1_Chr2_-_19622251_19622301 1.57 AT2G47940.2
AT2G47940.1
DEG2
DEGP protease 2
arTal_v1_Chr4_-_12581167_12581251 1.56 AT4G24265.1
AT4G24265.3
AT4G24265.2
AT4G24265
homeobox protein
arTal_v1_Chr1_+_23729875_23729922 1.56 AT1G63940.2
AT1G63940.1
MDAR6
monodehydroascorbate reductase 6
arTal_v1_Chr5_+_568425_568425 1.56 AT5G02540.1
AT5G02540
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_+_8541879_8541879 1.55 AT4G14940.1
AO1
amine oxidase 1
arTal_v1_Chr2_+_9293261_9293261 1.55 AT2G21790.1
RNR1
ribonucleotide reductase 1
arTal_v1_Chr2_+_15617635_15617635 1.54 AT2G37180.1
RD28
Aquaporin-like superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G55110

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.5 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.8 7.3 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.8 4.1 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.7 2.2 GO:0090058 metaxylem development(GO:0090058)
0.7 5.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.7 11.6 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.7 12.7 GO:0006949 syncytium formation(GO:0006949)
0.6 3.0 GO:0010450 inflorescence meristem growth(GO:0010450)
0.6 3.6 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.6 1.8 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.6 1.7 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.6 1.7 GO:0043470 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.5 1.6 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.5 2.1 GO:0015669 gas transport(GO:0015669)
0.5 3.5 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.5 2.9 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.5 2.4 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.5 1.9 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.5 3.8 GO:0040001 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.5 1.9 GO:0010047 fruit dehiscence(GO:0010047)
0.5 4.6 GO:0010088 phloem development(GO:0010088)
0.5 2.3 GO:0010422 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.4 2.2 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.4 1.3 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.4 1.3 GO:0035404 histone-serine phosphorylation(GO:0035404) histone H3-S10 phosphorylation(GO:0043987)
0.4 2.2 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.4 4.1 GO:0009405 pathogenesis(GO:0009405)
0.4 1.7 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.4 0.8 GO:0043447 alkane biosynthetic process(GO:0043447)
0.4 1.2 GO:0072526 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.4 1.6 GO:0010480 microsporocyte differentiation(GO:0010480)
0.4 4.7 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.4 2.6 GO:0090059 protoxylem development(GO:0090059)
0.4 1.4 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.4 9.2 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.3 1.0 GO:1900364 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.3 8.8 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.3 2.3 GO:0080117 secondary growth(GO:0080117)
0.3 1.0 GO:0071258 cellular response to gravity(GO:0071258)
0.3 6.5 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.3 1.0 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.3 1.3 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.3 2.2 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.3 1.5 GO:0010376 stomatal complex formation(GO:0010376)
0.3 1.7 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 0.3 GO:0010254 nectary development(GO:0010254)
0.3 3.7 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.3 8.4 GO:0010025 wax biosynthetic process(GO:0010025)
0.3 0.8 GO:0080145 cysteine homeostasis(GO:0080145)
0.3 3.3 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.3 0.8 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.3 1.8 GO:0090057 root radial pattern formation(GO:0090057)
0.3 2.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.3 1.0 GO:0009558 embryo sac cellularization(GO:0009558)
0.3 1.6 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.3 0.8 GO:0051639 actin filament network formation(GO:0051639)
0.3 1.0 GO:0019499 cyanide metabolic process(GO:0019499)
0.2 1.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.2 1.0 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.2 3.0 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 5.0 GO:0005983 starch catabolic process(GO:0005983)
0.2 1.2 GO:0007020 microtubule nucleation(GO:0007020)
0.2 1.6 GO:0006546 glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 1.4 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.2 0.9 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 2.2 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 2.8 GO:0005987 sucrose catabolic process(GO:0005987)
0.2 16.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.2 1.5 GO:0051952 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.2 0.2 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.2 6.6 GO:0006284 base-excision repair(GO:0006284)
0.2 1.3 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 1.0 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.2 1.0 GO:0035627 ceramide transport(GO:0035627)
0.2 1.2 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.2 6.7 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.2 2.6 GO:0032544 plastid translation(GO:0032544)
0.2 1.4 GO:0072337 modified amino acid transport(GO:0072337)
0.2 1.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 1.2 GO:0010067 procambium histogenesis(GO:0010067)
0.2 0.6 GO:0010433 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.2 1.8 GO:0009799 specification of symmetry(GO:0009799)
0.2 16.9 GO:0045490 pectin catabolic process(GO:0045490)
0.2 1.4 GO:0010155 regulation of proton transport(GO:0010155)
0.2 6.7 GO:0009686 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.2 0.7 GO:0052746 inositol phosphorylation(GO:0052746)
0.2 1.5 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 0.4 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.5 GO:0080152 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.2 0.7 GO:0048462 carpel formation(GO:0048462)
0.2 2.3 GO:0030488 tRNA methylation(GO:0030488)
0.2 1.0 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 4.0 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.2 0.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 0.7 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.2 1.2 GO:0009635 response to herbicide(GO:0009635)
0.2 1.0 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 0.8 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 0.5 GO:0035493 SNARE complex assembly(GO:0035493)
0.2 0.8 GO:0010338 leaf formation(GO:0010338)
0.2 1.6 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.2 0.8 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.2 1.0 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.2 0.5 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 2.3 GO:0055069 zinc ion homeostasis(GO:0055069)
0.2 0.5 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 1.8 GO:0016559 peroxisome fission(GO:0016559)
0.2 1.1 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.2 0.8 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.2 1.7 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 1.2 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 2.1 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.1 0.6 GO:0034389 lipid particle organization(GO:0034389)
0.1 1.6 GO:0010206 photosystem II repair(GO:0010206)
0.1 0.7 GO:0010226 response to lithium ion(GO:0010226)
0.1 1.9 GO:0048829 root cap development(GO:0048829)
0.1 1.4 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.9 GO:0006915 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 2.1 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 2.2 GO:0007052 mitotic spindle organization(GO:0007052)
0.1 1.0 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.8 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051) cellular response to hydrogen peroxide(GO:0070301)
0.1 1.2 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 1.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 0.4 GO:0034486 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.1 0.8 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.7 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.9 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 1.0 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 1.1 GO:1902025 nitrate import(GO:1902025)
0.1 0.5 GO:0009270 response to humidity(GO:0009270)
0.1 0.6 GO:0080119 ER body organization(GO:0080119)
0.1 1.1 GO:0010037 response to carbon dioxide(GO:0010037)
0.1 0.4 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 0.7 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 4.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 3.6 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 1.9 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.4 GO:1901880 negative regulation of protein complex disassembly(GO:0043242) negative regulation of protein depolymerization(GO:1901880)
0.1 2.2 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 0.8 GO:0032351 negative regulation of hormone metabolic process(GO:0032351) negative regulation of auxin metabolic process(GO:0090356)
0.1 2.7 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.1 1.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.3 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 1.0 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.8 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.7 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 1.1 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 0.7 GO:0010449 root meristem growth(GO:0010449)
0.1 1.5 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 0.5 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.1 0.8 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.1 2.7 GO:0070417 cellular response to cold(GO:0070417)
0.1 1.4 GO:0001709 cell fate determination(GO:0001709)
0.1 2.4 GO:0080022 primary root development(GO:0080022)
0.1 0.7 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.1 0.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 2.0 GO:0009638 phototropism(GO:0009638)
0.1 1.5 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 1.1 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.2 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.1 1.5 GO:1902645 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.1 3.5 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 0.6 GO:0010052 guard cell differentiation(GO:0010052)
0.1 0.7 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.1 0.5 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 1.2 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 1.0 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 1.4 GO:0008356 asymmetric cell division(GO:0008356)
0.1 0.3 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.1 0.7 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 1.6 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.1 3.5 GO:0009690 cytokinin metabolic process(GO:0009690)
0.1 1.5 GO:0042593 glucose homeostasis(GO:0042593)
0.1 1.5 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.1 0.7 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.5 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.1 1.5 GO:0050821 protein stabilization(GO:0050821)
0.1 0.7 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 1.0 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.7 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.7 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.2 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.2 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.1 1.0 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.5 GO:1901072 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.6 GO:0034312 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 1.1 GO:0046688 response to copper ion(GO:0046688)
0.1 0.7 GO:0016925 protein sumoylation(GO:0016925)
0.1 0.7 GO:0016554 cytidine to uridine editing(GO:0016554)
0.1 1.6 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 0.5 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.6 GO:0036065 fucosylation(GO:0036065)
0.1 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.9 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.5 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.5 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 0.4 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 1.0 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.5 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 3.5 GO:0007018 microtubule-based movement(GO:0007018)
0.1 1.4 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.1 0.7 GO:0048564 photosystem I assembly(GO:0048564)
0.1 1.1 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 0.3 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 1.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 0.9 GO:0006301 postreplication repair(GO:0006301)
0.1 0.2 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.3 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 2.4 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 1.4 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.3 GO:0007095 mitotic G2 DNA damage checkpoint(GO:0007095) G2 DNA damage checkpoint(GO:0031572)
0.0 0.6 GO:0009251 glucan catabolic process(GO:0009251)
0.0 0.3 GO:0043486 histone exchange(GO:0043486)
0.0 0.4 GO:0045842 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of chromosome segregation(GO:0051984) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 1.7 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.4 GO:0090151 establishment of protein localization to mitochondrial membrane(GO:0090151)
0.0 0.5 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.6 GO:0010274 hydrotropism(GO:0010274)
0.0 0.2 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.3 GO:0051570 regulation of histone H3-K9 methylation(GO:0051570)
0.0 0.2 GO:0006569 tryptophan catabolic process(GO:0006569) indole-containing compound catabolic process(GO:0042436) indolalkylamine catabolic process(GO:0046218)
0.0 1.1 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.9 GO:0016556 mRNA modification(GO:0016556)
0.0 2.1 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.6 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 1.0 GO:0030705 vesicle transport along actin filament(GO:0030050) cytoskeleton-dependent intracellular transport(GO:0030705) vesicle cytoskeletal trafficking(GO:0099518)
0.0 1.4 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.1 GO:0055064 chloride ion homeostasis(GO:0055064)
0.0 1.0 GO:0010214 seed coat development(GO:0010214)
0.0 0.4 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.4 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.2 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 0.1 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 3.0 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.4 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.6 GO:0045165 cell fate commitment(GO:0045165)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.3 GO:0005977 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.0 1.4 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.1 GO:0090342 regulation of cell aging(GO:0090342)
0.0 0.5 GO:0006573 valine metabolic process(GO:0006573)
0.0 1.0 GO:0048825 cotyledon development(GO:0048825)
0.0 0.6 GO:0010182 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 1.1 GO:0016485 protein processing(GO:0016485)
0.0 2.6 GO:0007010 cytoskeleton organization(GO:0007010)
0.0 0.2 GO:0006529 asparagine biosynthetic process(GO:0006529)
0.0 4.3 GO:0009657 plastid organization(GO:0009657)
0.0 4.1 GO:0009932 cell tip growth(GO:0009932)
0.0 0.2 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.3 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.0 0.2 GO:0019252 starch biosynthetic process(GO:0019252)
0.0 0.3 GO:0030091 protein repair(GO:0030091)
0.0 0.5 GO:0009846 pollen germination(GO:0009846)
0.0 0.2 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.3 GO:0009086 methionine biosynthetic process(GO:0009086)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.2 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.0 GO:0010198 synergid death(GO:0010198)
0.0 0.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.5 GO:0022904 respiratory electron transport chain(GO:0022904)
0.0 0.4 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.4 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 1.4 GO:0007017 microtubule-based process(GO:0007017)
0.0 0.3 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.3 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 2.1 GO:0032259 methylation(GO:0032259)
0.0 0.3 GO:0050918 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.1 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.4 GO:0009809 lignin biosynthetic process(GO:0009809)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.8 GO:0031515 tRNA (m1A) methyltransferase complex(GO:0031515)
0.6 1.8 GO:0009522 photosystem I(GO:0009522)
0.5 3.6 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.5 1.9 GO:1990752 microtubule end(GO:1990752)
0.4 2.2 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.4 3.6 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.3 2.7 GO:0009538 photosystem I reaction center(GO:0009538)
0.3 1.3 GO:0032133 chromosome passenger complex(GO:0032133)
0.3 5.5 GO:0009531 secondary cell wall(GO:0009531)
0.3 0.8 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.3 2.1 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.3 0.8 GO:0032432 actin filament bundle(GO:0032432)
0.3 3.3 GO:0045298 tubulin complex(GO:0045298)
0.2 5.1 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.2 1.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.2 1.9 GO:0030139 endocytic vesicle(GO:0030139)
0.2 1.4 GO:0000922 spindle pole(GO:0000922)
0.2 1.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 0.6 GO:0031211 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.2 1.8 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 1.8 GO:0042555 MCM complex(GO:0042555)
0.2 1.2 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 1.0 GO:0009346 citrate lyase complex(GO:0009346)
0.2 3.1 GO:0055028 cortical microtubule(GO:0055028)
0.1 0.4 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.1 0.5 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 2.4 GO:0009574 preprophase band(GO:0009574)
0.1 0.8 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 22.1 GO:0009505 plant-type cell wall(GO:0009505)
0.1 4.8 GO:0010319 stromule(GO:0010319)
0.1 1.8 GO:0009986 cell surface(GO:0009986)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.7 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.4 GO:0032044 DSIF complex(GO:0032044)
0.1 1.4 GO:0048500 signal recognition particle(GO:0048500)
0.1 0.5 GO:0000812 Swr1 complex(GO:0000812)
0.1 0.4 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.1 22.8 GO:0048046 apoplast(GO:0048046)
0.1 0.8 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.9 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 0.3 GO:0030870 Mre11 complex(GO:0030870)
0.1 1.7 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 0.5 GO:0044545 NSL complex(GO:0044545)
0.1 1.6 GO:0009508 plastid chromosome(GO:0009508)
0.1 5.4 GO:0005874 microtubule(GO:0005874)
0.1 1.0 GO:0016459 myosin complex(GO:0016459)
0.1 0.6 GO:0010168 ER body(GO:0010168)
0.1 14.7 GO:0055035 plastid thylakoid membrane(GO:0055035)
0.1 2.5 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 14.9 GO:0031225 anchored component of membrane(GO:0031225)
0.1 0.4 GO:0035618 root hair(GO:0035618) root hair tip(GO:0035619)
0.1 3.0 GO:0005811 lipid particle(GO:0005811)
0.1 1.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 2.7 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.8 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.3 GO:0000796 condensin complex(GO:0000796)
0.0 2.1 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 1.3 GO:0009524 phragmoplast(GO:0009524)
0.0 25.0 GO:0044434 chloroplast part(GO:0044434)
0.0 76.4 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.3 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.3 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.3 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.8 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.3 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.0 GO:0034457 Mpp10 complex(GO:0034457)
0.0 1.0 GO:0000138 Golgi trans cisterna(GO:0000138)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.5 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
1.0 2.9 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
1.0 3.8 GO:0016429 tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)
0.9 7.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.9 4.3 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.8 3.2 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.7 3.0 GO:0019156 isoamylase activity(GO:0019156)
0.7 2.1 GO:0005344 oxygen transporter activity(GO:0005344)
0.6 3.6 GO:0051723 protein methylesterase activity(GO:0051723)
0.6 3.0 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.6 7.1 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.6 7.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.6 1.7 GO:0051010 microtubule plus-end binding(GO:0051010)
0.6 1.7 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.6 4.5 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.5 2.1 GO:0070402 NADPH binding(GO:0070402)
0.5 1.6 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.5 11.6 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.5 2.9 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.5 2.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.4 2.2 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.4 4.9 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.4 1.3 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.4 1.7 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.4 1.2 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.4 1.2 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.4 9.3 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.4 1.8 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.4 1.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.3 2.7 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.3 1.7 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 1.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 1.7 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.3 0.7 GO:0019789 SUMO transferase activity(GO:0019789)
0.3 1.3 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.3 8.1 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.3 2.4 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.3 0.9 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.3 0.8 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.3 1.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.3 0.8 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.3 2.2 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.3 0.8 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.3 2.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.3 1.7 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.3 2.2 GO:0042299 lupeol synthase activity(GO:0042299)
0.3 1.6 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.3 1.0 GO:0004075 biotin carboxylase activity(GO:0004075)
0.3 6.5 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.2 2.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.2 0.7 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.2 2.8 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.2 0.7 GO:0004359 glutaminase activity(GO:0004359)
0.2 2.8 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 1.1 GO:0010313 phytochrome binding(GO:0010313)
0.2 0.9 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.2 5.3 GO:0004568 chitinase activity(GO:0004568)
0.2 0.9 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 1.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.2 1.0 GO:0046624 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 0.8 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.2 2.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 1.4 GO:0043015 gamma-tubulin binding(GO:0043015)
0.2 2.0 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.2 1.2 GO:0031177 phosphopantetheine binding(GO:0031177)
0.2 1.8 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2 1.3 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.2 0.8 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.2 3.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.2 1.4 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.2 4.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 1.4 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.2 0.5 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.2 1.0 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.2 1.4 GO:0008083 growth factor activity(GO:0008083)
0.2 1.0 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.2 1.2 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.2 2.0 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.2 0.8 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 1.0 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 0.5 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 1.1 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.2 4.2 GO:0008810 cellulase activity(GO:0008810)
0.2 0.8 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.2 0.5 GO:0008172 S-methyltransferase activity(GO:0008172)
0.2 2.3 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.2 1.2 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.9 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 1.6 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.1 3.7 GO:0016168 chlorophyll binding(GO:0016168)
0.1 1.4 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 4.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.8 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 15.1 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 1.6 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.1 6.3 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 0.9 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.6 GO:0000150 recombinase activity(GO:0000150)
0.1 2.7 GO:0010333 terpene synthase activity(GO:0010333)
0.1 2.8 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 2.2 GO:0019203 carbohydrate phosphatase activity(GO:0019203)
0.1 1.4 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.5 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.8 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 1.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 1.0 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 1.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.8 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.6 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.1 0.8 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.8 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 1.3 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.3 GO:0080106 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 2.2 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.8 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 1.1 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.1 1.1 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 7.0 GO:0030599 pectinesterase activity(GO:0030599)
0.1 4.8 GO:0070008 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.1 0.6 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 0.4 GO:0019871 ion channel inhibitor activity(GO:0008200) channel regulator activity(GO:0016247) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.1 0.5 GO:0019904 protein domain specific binding(GO:0019904)
0.1 5.5 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.6 GO:0015248 sterol transporter activity(GO:0015248)
0.1 1.7 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.4 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 6.0 GO:0008017 microtubule binding(GO:0008017)
0.1 0.8 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.1 0.7 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 1.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 5.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 5.0 GO:0043621 protein self-association(GO:0043621)
0.1 3.4 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 2.3 GO:0016597 amino acid binding(GO:0016597)
0.1 1.9 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.7 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.5 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.4 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.4 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 0.6 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 0.6 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 7.9 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.1 0.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.9 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.4 GO:0004096 catalase activity(GO:0004096)
0.1 2.3 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.3 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.5 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.8 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 2.2 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 0.5 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 1.1 GO:0030276 clathrin binding(GO:0030276)
0.1 0.6 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 0.1 GO:0015377 cation:chloride symporter activity(GO:0015377)
0.1 0.6 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 2.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.4 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.5 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 2.4 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.4 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 1.4 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.3 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 1.3 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 1.6 GO:0005179 hormone activity(GO:0005179)
0.0 0.7 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.2 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.2 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 1.2 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0001006 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.0 0.9 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.2 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 1.1 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 1.0 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.5 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.4 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.3 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.3 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.3 GO:0005496 steroid binding(GO:0005496)
0.0 0.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.4 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.4 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 1.2 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.4 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.7 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 1.0 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 1.3 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.8 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.9 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 5.8 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.3 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.5 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 1.5 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.1 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.1 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.1 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.8 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.0 0.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.2 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.2 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 1.8 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.6 GO:0034062 RNA polymerase activity(GO:0034062)
0.0 0.7 GO:0004521 endoribonuclease activity(GO:0004521)
0.0 0.2 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 PID IL12 2PATHWAY IL12-mediated signaling events
0.5 1.5 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.3 1.2 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.4 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.1 0.8 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.7 PID E2F PATHWAY E2F transcription factor network
0.1 0.2 PID ARF 3PATHWAY Arf1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.1 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.4 1.5 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.4 1.8 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.3 1.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.3 0.8 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.2 0.7 REACTOME MITOTIC G2 G2 M PHASES Genes involved in Mitotic G2-G2/M phases
0.2 5.1 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.2 0.4 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.2 1.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 0.8 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.8 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.1 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.1 0.8 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.3 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.1 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks