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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G61730

Z-value: 0.33

Transcription factors associated with AT1G61730

Gene Symbol Gene ID Gene Info
AT1G61730
AT1G61730 DNA-binding storekeeper protein-related transcriptional regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G61730arTal_v1_Chr1_-_22794714_22794714-0.721.6e-05Click!

Activity profile of AT1G61730 motif

Sorted Z-values of AT1G61730 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_17714390_17714390 0.84 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
arTal_v1_Chr5_-_5741500_5741500 0.83 AT5G17420.1
IRX3
Cellulose synthase family protein
arTal_v1_Chr1_+_3111694_3111694 0.75 AT1G09610.1
GXM3
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
arTal_v1_Chr3_-_6421983_6422141 0.68 AT3G18660.1
AT3G18660.3
AT3G18660.2
PGSIP1
plant glycogenin-like starch initiation protein 1
arTal_v1_Chr5_+_17715687_17715687 0.54 AT5G44030.3
CESA4
cellulose synthase A4
arTal_v1_Chr5_+_5084524_5084695 0.53 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr4_-_16063070_16063251 0.52 AT4G33330.2
AT4G33330.1
AT4G33330.5
AT4G33330.3
AT4G33330.4
PGSIP3
plant glycogenin-like starch initiation protein 3
arTal_v1_Chr5_+_5438165_5438165 0.43 AT5G16600.1
MYB43
myb domain protein 43
arTal_v1_Chr1_+_23337167_23337167 0.42 AT1G62990.1
KNAT7
homeobox knotted-like protein
arTal_v1_Chr2_-_14644355_14644355 0.38 AT2G34710.1
PHB
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
arTal_v1_Chr1_+_27076020_27076020 0.33 AT1G71930.1
VND7
vascular related NAC-domain protein 7
arTal_v1_Chr1_-_19161737_19161737 0.29 AT1G51680.1
4CL1
4-coumarate:CoA ligase 1
arTal_v1_Chr1_-_19161552_19161552 0.29 AT1G51680.3
AT1G51680.2
4CL1
4-coumarate:CoA ligase 1
arTal_v1_Chr1_+_27074702_27074702 0.28 AT1G71930.2
VND7
vascular related NAC-domain protein 7
arTal_v1_Chr2_-_17060652_17060652 0.27 AT2G40890.1
CYP98A3
cytochrome P450, family 98, subfamily A, polypeptide 3
arTal_v1_Chr3_-_2578276_2578276 0.24 AT3G08500.1
MYB83
myb domain protein 83
arTal_v1_Chr1_-_9531489_9531489 0.15 AT1G27440.1
GUT2
Exostosin family protein
arTal_v1_Chr5_-_4065075_4065075 0.04 AT5G12870.1
MYB46
myb domain protein 46
arTal_v1_Chr2_-_12996012_12996012 0.01 AT2G30490.1
C4H
cinnamate-4-hydroxylase
arTal_v1_Chr1_+_5479287_5479287 0.01 AT1G15950.7
CCR1
cinnamoyl coa reductase 1
arTal_v1_Chr1_+_5478603_5478603 0.01 AT1G15950.1
CCR1
cinnamoyl coa reductase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G61730

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 1.3 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.3 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.6 GO:0090059 protoxylem development(GO:0090059)
0.0 1.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.5 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.4 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) regulation of lignin biosynthetic process(GO:1901141) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0010330 cellulose synthase complex(GO:0010330)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 2.2 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)